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The map label for this gene is ps517

Identifier: 125625017

GI number: 125625017

Start: 2214289

End: 2215917

Strand: Reverse

Name: ps517

Synonym: llmg_2252

Alternate gene names: NA

Gene position: 2215917-2214289 (Counterclockwise)

Preceding gene: 125625018

Following gene: 125625016

Centisome position: 87.6

GC content: 39.04

Gene sequence:

>1629_bases
ATGACAGACCAATTAGATAAACTTGTGGCAGAAACGCCACAGGAAAACGTAAGAAGTCCGAAACCTAAAATAGAGGACTT
CACAGATTATGGCCAAGACGGCAAAAAAGTCGTTGATGTCGCAGGTTATCAAGACAGTTTGAAAGACTGGCTAGAACAAG
AAAAAGAAATCATTAATAGCCCTGACTATGTCAAAGCAAACACTCAAACGCTTAGAGCGGTTAGAAAGCTATTCTTTGAA
CACCGTAACTTATTTTTAAGCACACCTAAAGAGGACGGAAAGCCACCGAAATCATTAAGCCCTTTAGAAACAGCAAGAAT
CATCTATAAGACGCTCAAAGTCATCAAACTAGACCACCAAAGCGGACTGTTAGGCATTTACAATCATGAACTAGGAATAT
ATGAAACAAATGAAAACTTCTTTCATCGGCTCATTTATTGGCTAGAGCCGTCTTATAGTCAAGCACGGTCAAAAGAAGTC
TTATTCAAACTTGAAACCTTAGCAGAGGTTAAGCAACAAACCGCAGAAGCTCATCTTATCCCAGTGGCGAACGGTATTTT
CAACAAGAAAACGCAACAATTAGAGCCATTTAGCCCTAGTTATGTCTTTACTTCAACGATTGCGACCAAGTACAACGCTA
AAGCCAAAGCGCCTAATATTAACGGCTGGAATATAGACGACTGGCTCAATGATTTAATGAGCGGAGATGAAGAGCTTGTC
AAATTGTTATGGCAAGTCATTTCAGCAAGTACCAACGGAAACTATTCTTATCGAAAAGGCGTTTGGCTTGTCGGTAAAGG
AAATGACGGCAAAGGGACATTTCAGAGCCTTATCATGAACCTTATCGGACGCGAGAACGTGGCAAGTGTCAAAGCTGAAC
AATTTGCTGAACGGTTCGCCCTTTCTCAAGTCGTTGGTAAAACTTGCATTATTGGAGATGATAGCCAAGTTAGTTACTTA
GACAATGCAGGGAACTATTTCAGCGTAGTTACTGGCGACCCAGTACCGATTGAAGCAAAAGGAAAACAACCGACTTTAGC
AGTATTTAACAAGCTAGTTATTCAATCGACTAATTTCTTGCCTAAGTTCAGAAACAAGTCGAACGGAACTTATAGACGTT
TGCTCATCGTGCCTTTTGAAAAGTCTTTTACCGCAGATAATGACAATTGGAAAATTAAAGATGATTATATTAAACGCAAA
GACGTTTTGGAGTACGTGCTTAAAATCGCCTTATCACTTAATTTTGATAAATTTGACGAACCTAAAGCCACAAAGGGGCT
GTTAGATGACTTCAAAATCAGCAATGACAATGTACTGGCATTTGTAAATGATATATTTGATGAGTTTGTCAGTGATTTTC
TACCGACTACTTTTCTAAGTGCCTTATATCGAGCATGGTGTGAAGATGAGGGTATTAAGCCATTTACTAAGCGAGAGTTT
GAAAATAAACTACCTGACCACATTAAAGAAAAATGGATAAAAACAACGCAAAGACCGAATAGCGCAGGTTTTAATAGAGC
CATTGATTTACACCGAGCCGAAGAATATGAGCTTTTTAGACGGCTGTTTCATTGGGACGATGACAAACAAAAAAAGGTTG
CTAAAGGCTATTTGCGCAAGAAAAAATAA

Upstream 100 bases:

>100_bases
TTATTGCGAACATTTAACAATCGAACCAGTCCGCCCTTACCTGATGACGAGCTGGCAACTATTTGGAAAAGTGTATTCAA
GATGAAATAGAAAGGAAGTC

Downstream 100 bases:

>100_bases
AAAACGTTACTGAAAATCGGTAACGCGTTACTGTTAGAAGTTACAGCTTTAACCCTATGGTTAAGCCGTTTGTAGCACTT
TGTTACTATGTTACTGTCAA

Product: putative DNA primase

Products: NA

Alternate protein names: Primase; Phage/Plasmid Primase P4 Family; P4 Family Phage/Plasmid Primase; Phage Primase; Phage/Plasmid Primase; P4-Specific DNA Primase; Phage Replication Protein; Phage DNA Polymerase; Phage DNA Primase; Phage Associated Protein; Prophage Lp4 DNA Primase/Helicase; Phage DNA Primase-Like Protein; RepA Protein; Prophage; Plasmid/Phage Primase; Nucleoside Triphosphatase D5 Family; DNA Primase Domain-Containing Protein; Replication Protein; Phage-Related DNA Primase; ATPase; Prophage Lsa1 DNA Primase; Phage-Related DNA Primase/Helicase; Phage Associated DNA Primase; Primase Superantigen-Encoding Pathogenicity Islands SaPI; Phage/Plasmid Primase P4-Like Protein; Prophage DNA Primase; Nucleic Acid Independent Nucleoside Triphosphatase

Number of amino acids: Translated: 542; Mature: 541

Protein sequence:

>542_residues
MTDQLDKLVAETPQENVRSPKPKIEDFTDYGQDGKKVVDVAGYQDSLKDWLEQEKEIINSPDYVKANTQTLRAVRKLFFE
HRNLFLSTPKEDGKPPKSLSPLETARIIYKTLKVIKLDHQSGLLGIYNHELGIYETNENFFHRLIYWLEPSYSQARSKEV
LFKLETLAEVKQQTAEAHLIPVANGIFNKKTQQLEPFSPSYVFTSTIATKYNAKAKAPNINGWNIDDWLNDLMSGDEELV
KLLWQVISASTNGNYSYRKGVWLVGKGNDGKGTFQSLIMNLIGRENVASVKAEQFAERFALSQVVGKTCIIGDDSQVSYL
DNAGNYFSVVTGDPVPIEAKGKQPTLAVFNKLVIQSTNFLPKFRNKSNGTYRRLLIVPFEKSFTADNDNWKIKDDYIKRK
DVLEYVLKIALSLNFDKFDEPKATKGLLDDFKISNDNVLAFVNDIFDEFVSDFLPTTFLSALYRAWCEDEGIKPFTKREF
ENKLPDHIKEKWIKTTQRPNSAGFNRAIDLHRAEEYELFRRLFHWDDDKQKKVAKGYLRKKK

Sequences:

>Translated_542_residues
MTDQLDKLVAETPQENVRSPKPKIEDFTDYGQDGKKVVDVAGYQDSLKDWLEQEKEIINSPDYVKANTQTLRAVRKLFFE
HRNLFLSTPKEDGKPPKSLSPLETARIIYKTLKVIKLDHQSGLLGIYNHELGIYETNENFFHRLIYWLEPSYSQARSKEV
LFKLETLAEVKQQTAEAHLIPVANGIFNKKTQQLEPFSPSYVFTSTIATKYNAKAKAPNINGWNIDDWLNDLMSGDEELV
KLLWQVISASTNGNYSYRKGVWLVGKGNDGKGTFQSLIMNLIGRENVASVKAEQFAERFALSQVVGKTCIIGDDSQVSYL
DNAGNYFSVVTGDPVPIEAKGKQPTLAVFNKLVIQSTNFLPKFRNKSNGTYRRLLIVPFEKSFTADNDNWKIKDDYIKRK
DVLEYVLKIALSLNFDKFDEPKATKGLLDDFKISNDNVLAFVNDIFDEFVSDFLPTTFLSALYRAWCEDEGIKPFTKREF
ENKLPDHIKEKWIKTTQRPNSAGFNRAIDLHRAEEYELFRRLFHWDDDKQKKVAKGYLRKKK
>Mature_541_residues
TDQLDKLVAETPQENVRSPKPKIEDFTDYGQDGKKVVDVAGYQDSLKDWLEQEKEIINSPDYVKANTQTLRAVRKLFFEH
RNLFLSTPKEDGKPPKSLSPLETARIIYKTLKVIKLDHQSGLLGIYNHELGIYETNENFFHRLIYWLEPSYSQARSKEVL
FKLETLAEVKQQTAEAHLIPVANGIFNKKTQQLEPFSPSYVFTSTIATKYNAKAKAPNINGWNIDDWLNDLMSGDEELVK
LLWQVISASTNGNYSYRKGVWLVGKGNDGKGTFQSLIMNLIGRENVASVKAEQFAERFALSQVVGKTCIIGDDSQVSYLD
NAGNYFSVVTGDPVPIEAKGKQPTLAVFNKLVIQSTNFLPKFRNKSNGTYRRLLIVPFEKSFTADNDNWKIKDDYIKRKD
VLEYVLKIALSLNFDKFDEPKATKGLLDDFKISNDNVLAFVNDIFDEFVSDFLPTTFLSALYRAWCEDEGIKPFTKREFE
NKLPDHIKEKWIKTTQRPNSAGFNRAIDLHRAEEYELFRRLFHWDDDKQKKVAKGYLRKKK

Specific function: Unknown

COG id: COG3378

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62343; Mature: 62212

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDQLDKLVAETPQENVRSPKPKIEDFTDYGQDGKKVVDVAGYQDSLKDWLEQEKEIINS
CCCHHHHHHHHCCHHHCCCCCCCCHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHCCC
PDYVKANTQTLRAVRKLFFEHRNLFLSTPKEDGKPPKSLSPLETARIIYKTLKVIKLDHQ
CCCEECCHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHEECCC
SGLLGIYNHELGIYETNENFFHRLIYWLEPSYSQARSKEVLFKLETLAEVKQQTAEAHLI
CCEEEEEECCCCEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
PVANGIFNKKTQQLEPFSPSYVFTSTIATKYNAKAKAPNINGWNIDDWLNDLMSGDEELV
ECCCCHHCCCHHCCCCCCCCEEEHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHHH
KLLWQVISASTNGNYSYRKGVWLVGKGNDGKGTFQSLIMNLIGRENVASVKAEQFAERFA
HHHHHHHHCCCCCCCEEECCEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LSQVVGKTCIIGDDSQVSYLDNAGNYFSVVTGDPVPIEAKGKQPTLAVFNKLVIQSTNFL
HHHHHCCEEEECCCCCCHHCCCCCCEEEEEECCCEEEECCCCCCHHHHHHHHHHHCCCCC
PKFRNKSNGTYRRLLIVPFEKSFTADNDNWKIKDDYIKRKDVLEYVLKIALSLNFDKFDE
CCCCCCCCCCEEEEEEEECCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHCCCCCCCC
PKATKGLLDDFKISNDNVLAFVNDIFDEFVSDFLPTTFLSALYRAWCEDEGIKPFTKREF
CCHHHHCHHHCEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
ENKLPDHIKEKWIKTTQRPNSAGFNRAIDLHRAEEYELFRRLFHWDDDKQKKVAKGYLRK
HHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC
KK
CC
>Mature Secondary Structure 
TDQLDKLVAETPQENVRSPKPKIEDFTDYGQDGKKVVDVAGYQDSLKDWLEQEKEIINS
CCHHHHHHHHCCHHHCCCCCCCCHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHCCC
PDYVKANTQTLRAVRKLFFEHRNLFLSTPKEDGKPPKSLSPLETARIIYKTLKVIKLDHQ
CCCEECCHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHEECCC
SGLLGIYNHELGIYETNENFFHRLIYWLEPSYSQARSKEVLFKLETLAEVKQQTAEAHLI
CCEEEEEECCCCEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
PVANGIFNKKTQQLEPFSPSYVFTSTIATKYNAKAKAPNINGWNIDDWLNDLMSGDEELV
ECCCCHHCCCHHCCCCCCCCEEEHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHHH
KLLWQVISASTNGNYSYRKGVWLVGKGNDGKGTFQSLIMNLIGRENVASVKAEQFAERFA
HHHHHHHHCCCCCCCEEECCEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LSQVVGKTCIIGDDSQVSYLDNAGNYFSVVTGDPVPIEAKGKQPTLAVFNKLVIQSTNFL
HHHHHCCEEEECCCCCCHHCCCCCCEEEEEECCCEEEECCCCCCHHHHHHHHHHHCCCCC
PKFRNKSNGTYRRLLIVPFEKSFTADNDNWKIKDDYIKRKDVLEYVLKIALSLNFDKFDE
CCCCCCCCCCEEEEEEEECCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHCCCCCCCC
PKATKGLLDDFKISNDNVLAFVNDIFDEFVSDFLPTTFLSALYRAWCEDEGIKPFTKREF
CCHHHHCHHHCEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
ENKLPDHIKEKWIKTTQRPNSAGFNRAIDLHRAEEYELFRRLFHWDDDKQKKVAKGYLRK
HHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC
KK
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA