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The map label for this gene is yrrN [H]

Identifier: 125625009

GI number: 125625009

Start: 2207148

End: 2208119

Strand: Reverse

Name: yrrN [H]

Synonym: llmg_2244

Alternate gene names: 125625009

Gene position: 2208119-2207148 (Counterclockwise)

Preceding gene: 125625011

Following gene: 125625008

Centisome position: 87.3

GC content: 37.55

Gene sequence:

>972_bases
ATGAATTTGAAAAAACCTGAGCGGGAACATTATGATATAATTATCACTATGATTACTATTACTTCTACGGCAGAAAGTTT
GGAGCAAGCCAAAGCGTTGCTCGAAGCTGGAGTTGACCGTTTATACATTGGTGAAAAAAATTATGGTTTACGCGTTCCAA
CTGCGTTGACCAATGAAGAAATTCAAAAACTTACAGAACTTGCACATGAAGCAGGAAAAACAGTGACTGTCGCAGTCAAT
GCTTTGATGCACACAGAGATGATGGCAAAAATAAAAGAATTTTTAGATTTCTTAGTGGAAATTAAAGCTGACCGAATCGC
AGTAGGTGATGCAGGTGTGATTTTTATTTTACAACGTGACAAATATGAGCTTCCTTTTACTTATGATGCCTCAACCATGG
TTGCTTCTGCCCGTCAGGTTAATTTTTGGGCCAATCAAGGAGCGATTGAAGCAGTTCTTGCTCGTGAATTACCAAAAGAA
GAACTAGCGGATATGACCGATGAATTAGCTGTACCAGGCGAAATACTGGTTTATGGGGCTACTGTGATTCATCATAGCAA
ACGTCCTTTGGTACAGAATTATTATAATTTTATCAAGACAGAAGAAAATGGGAAAGATAGAGAACGAAATCTTTTTGTTT
CTGAACCTAAGAAAGTCGATACTCATTATTCAATCTTTGAAGACAATCACGGGACCCATATTTTTGCTAATGATGATTTA
GATATGATGACTGAACTTTCAGATTTGGTGGCAATGGGCTATGATCATTGGAAATTGGATGGAATTTTTACACGTGGTGA
AGATTTTGTTGCTGTAACCAAACTGTTTGTCGAGGCTAAAAACTTGATTGAAAAGGGCGAGTTTACAGAGCTCAAAGCTT
TCCAACTTGATGAAGAAATCCGAAAAATACACCCAGCGGGTCGTACTTTATCACATGGTTTCTACGATTTGGACAAAGAT
GCTATTAAATAA

Upstream 100 bases:

>100_bases
TTTAATGAAATTACTCTTTTGTTACTAAATGATTAAAATAAAATTAATCTATAATTTTTAATGAATAAATATCCTTTTTA
CTTATCATTTTTATCAGAGA

Downstream 100 bases:

>100_bases
AAAAGGCTGTTATTTACTGACAGCTTTTTTTACTTATAAAAATTTTATTATTCAGACTGCCCTTTTACTTTTATTCAAAA
ATTTTACTGACAAAGATTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MNLKKPEREHYDIIITMITITSTAESLEQAKALLEAGVDRLYIGEKNYGLRVPTALTNEEIQKLTELAHEAGKTVTVAVN
ALMHTEMMAKIKEFLDFLVEIKADRIAVGDAGVIFILQRDKYELPFTYDASTMVASARQVNFWANQGAIEAVLARELPKE
ELADMTDELAVPGEILVYGATVIHHSKRPLVQNYYNFIKTEENGKDRERNLFVSEPKKVDTHYSIFEDNHGTHIFANDDL
DMMTELSDLVAMGYDHWKLDGIFTRGEDFVAVTKLFVEAKNLIEKGEFTELKAFQLDEEIRKIHPAGRTLSHGFYDLDKD
AIK

Sequences:

>Translated_323_residues
MNLKKPEREHYDIIITMITITSTAESLEQAKALLEAGVDRLYIGEKNYGLRVPTALTNEEIQKLTELAHEAGKTVTVAVN
ALMHTEMMAKIKEFLDFLVEIKADRIAVGDAGVIFILQRDKYELPFTYDASTMVASARQVNFWANQGAIEAVLARELPKE
ELADMTDELAVPGEILVYGATVIHHSKRPLVQNYYNFIKTEENGKDRERNLFVSEPKKVDTHYSIFEDNHGTHIFANDDL
DMMTELSDLVAMGYDHWKLDGIFTRGEDFVAVTKLFVEAKNLIEKGEFTELKAFQLDEEIRKIHPAGRTLSHGFYDLDKD
AIK
>Mature_323_residues
MNLKKPEREHYDIIITMITITSTAESLEQAKALLEAGVDRLYIGEKNYGLRVPTALTNEEIQKLTELAHEAGKTVTVAVN
ALMHTEMMAKIKEFLDFLVEIKADRIAVGDAGVIFILQRDKYELPFTYDASTMVASARQVNFWANQGAIEAVLARELPKE
ELADMTDELAVPGEILVYGATVIHHSKRPLVQNYYNFIKTEENGKDRERNLFVSEPKKVDTHYSIFEDNHGTHIFANDDL
DMMTELSDLVAMGYDHWKLDGIFTRGEDFVAVTKLFVEAKNLIEKGEFTELKAFQLDEEIRKIHPAGRTLSHGFYDLDKD
AIK

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U32 family [H]

Homologues:

Organism=Escherichia coli, GI1788397, Length=290, Percent_Identity=25.5172413793103, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 36688; Mature: 36688

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLKKPEREHYDIIITMITITSTAESLEQAKALLEAGVDRLYIGEKNYGLRVPTALTNEE
CCCCCCCCCCCEEEEEEEEEHHHHHHHHHHHHHHHCCCCEEEECCCCCCEECCCHHCHHH
IQKLTELAHEAGKTVTVAVNALMHTEMMAKIKEFLDFLVEIKADRIAVGDAGVIFILQRD
HHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEEECC
KYELPFTYDASTMVASARQVNFWANQGAIEAVLARELPKEELADMTDELAVPGEILVYGA
CCCCCEEECHHHHHHHHHHEEEECCCCHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEE
TVIHHSKRPLVQNYYNFIKTEENGKDRERNLFVSEPKKVDTHYSIFEDNHGTHIFANDDL
HEEECCCCCHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCEEEEEECCCCCEEEECCCH
DMMTELSDLVAMGYDHWKLDGIFTRGEDFVAVTKLFVEAKNLIEKGEFTELKAFQLDEEI
HHHHHHHHHHHHCCCCEEECEEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
RKIHPAGRTLSHGFYDLDKDAIK
HHHCCCCCCCCCCCCCCCHHHCC
>Mature Secondary Structure
MNLKKPEREHYDIIITMITITSTAESLEQAKALLEAGVDRLYIGEKNYGLRVPTALTNEE
CCCCCCCCCCCEEEEEEEEEHHHHHHHHHHHHHHHCCCCEEEECCCCCCEECCCHHCHHH
IQKLTELAHEAGKTVTVAVNALMHTEMMAKIKEFLDFLVEIKADRIAVGDAGVIFILQRD
HHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEEECC
KYELPFTYDASTMVASARQVNFWANQGAIEAVLARELPKEELADMTDELAVPGEILVYGA
CCCCCEEECHHHHHHHHHHEEEECCCCHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEE
TVIHHSKRPLVQNYYNFIKTEENGKDRERNLFVSEPKKVDTHYSIFEDNHGTHIFANDDL
HEEECCCCCHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCEEEEEECCCCCEEEECCCH
DMMTELSDLVAMGYDHWKLDGIFTRGEDFVAVTKLFVEAKNLIEKGEFTELKAFQLDEEI
HHHHHHHHHHHHCCCCEEECEEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
RKIHPAGRTLSHGFYDLDKDAIK
HHHCCCCCCCCCCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]