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The map label for this gene is pcaC [H]

Identifier: 125624997

GI number: 125624997

Start: 2192458

End: 2192826

Strand: Reverse

Name: pcaC [H]

Synonym: llmg_2230

Alternate gene names: 125624997

Gene position: 2192826-2192458 (Counterclockwise)

Preceding gene: 125624999

Following gene: 125624994

Centisome position: 86.69

GC content: 36.31

Gene sequence:

>369_bases
ATGAACAAAAAAGAAATTGGCTTAGAAAACTTAGCAAAAATTGACGGGGCAGCAGCAAAACCTGTTGAAGAAGCACTCAA
AGATATTGCCCCTGATTTGAATGATATGATGATCAAATTTGCCTTTGGAACAATTTATAACCGAGGAGTGCTTGATTTTA
AGCAGCGTGAAATGATTACAATCACAAGTTTGTTGAGTCAGGGAGGTTTAGAAAATCAATTGCGCGTGCATATTCAGGCT
TCACTGAATGTTGGCTTGACACAAGAGGAAATCGTTGAAACATTTATTCATTGCATTCCCTATGTCGGCTTCCCTAAAGT
TTTAAATGCCATATTTATTGCCAAAGAAATATTTACTGACGAAAAGTAA

Upstream 100 bases:

>100_bases
TGAAATTTTATAAGTTTTTTTCATTTTCTACCTCTTTTTACTTGCTCTCAAGTTAACTTGAGGGTTTATACTGATTTTAC
CATAGAAAGGTGGAAATAAA

Downstream 100 bases:

>100_bases
AATTTACTGACAGATACAAAAAATTACTGACAAAATTTCCATCATAGGATAGTCGTTGACGCTTAAGCTTTTACGAATAT
GATAGTGGTTTCATCAGTAA

Product: gamma-carboxymuconolactone decarboxylase

Products: NA

Alternate protein names: CMD [H]

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MNKKEIGLENLAKIDGAAAKPVEEALKDIAPDLNDMMIKFAFGTIYNRGVLDFKQREMITITSLLSQGGLENQLRVHIQA
SLNVGLTQEEIVETFIHCIPYVGFPKVLNAIFIAKEIFTDEK

Sequences:

>Translated_122_residues
MNKKEIGLENLAKIDGAAAKPVEEALKDIAPDLNDMMIKFAFGTIYNRGVLDFKQREMITITSLLSQGGLENQLRVHIQA
SLNVGLTQEEIVETFIHCIPYVGFPKVLNAIFIAKEIFTDEK
>Mature_122_residues
MNKKEIGLENLAKIDGAAAKPVEEALKDIAPDLNDMMIKFAFGTIYNRGVLDFKQREMITITSLLSQGGLENQLRVHIQA
SLNVGLTQEEIVETFIHCIPYVGFPKVLNAIFIAKEIFTDEK

Specific function: Unknown

COG id: COG0599

COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003779
- InterPro:   IPR012788 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: =4.1.1.44 [H]

Molecular weight: Translated: 13637; Mature: 13637

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKEIGLENLAKIDGAAAKPVEEALKDIAPDLNDMMIKFAFGTIYNRGVLDFKQREMIT
CCCCCCCHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHH
ITSLLSQGGLENQLRVHIQASLNVGLTQEEIVETFIHCIPYVGFPKVLNAIFIAKEIFTD
HHHHHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
EK
CC
>Mature Secondary Structure
MNKKEIGLENLAKIDGAAAKPVEEALKDIAPDLNDMMIKFAFGTIYNRGVLDFKQREMIT
CCCCCCCHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHH
ITSLLSQGGLENQLRVHIQASLNVGLTQEEIVETFIHCIPYVGFPKVLNAIFIAKEIFTD
HHHHHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
EK
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2298704 [H]