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The map label for this gene is rmuC [H]

Identifier: 125624954

GI number: 125624954

Start: 2154235

End: 2155533

Strand: Reverse

Name: rmuC [H]

Synonym: llmg_2187

Alternate gene names: 125624954

Gene position: 2155533-2154235 (Counterclockwise)

Preceding gene: 125624955

Following gene: 125624953

Centisome position: 85.22

GC content: 35.87

Gene sequence:

>1299_bases
ATGGAAGTTATTATTATCATATTACTCATACTTTTGATTTTACTGTCCCTTGCCAATTTTTTCAAAAAGACTGACAAAGG
AAATACGAGTCATCAGTTAAATTATCTTAATCAAAATTTAGCGGAAATGCGCTCGGATGTTAATCAGCAACTGGCGCAAA
ATCGACAAGAACTTTCAAGTAGTTTACGCTCGGTCAATAATGATTTTGCAACACTGACAGAAAATATCAATAGCAAATTT
GACTGGCAGTTTAAAGATTTGCAAAGTTCAAATGAGCAAAAATTAGAAAAAATCTCTGTAAGTTTGGTAGAATCTACTGA
TAGAACGGTCACAAAACTGTCAGAACTGACAGAGGCAATGACAGACAAATTTGACCGTAAATTTAAAGAATTACAAGATT
CTAACGATAAGAGATTGAGTCAAATTCAGGAAACGGTCGATGAAAAATTGCAAGAAACATTGAATCGCAGAATTTCACAA
TCTTTTGAACAGGTTACTTTACATTTGAAAAATGTCGAAGAGGGCTTGGGAGAAATGAGAAATCTTGCCAGTGATGTGGA
CAGCTTGCAAAAGGTAATGACGGGTGTTAAAACACGTGGGATTGTTGGTGAAATTCAGCTAGGACGAATTTTAGAGCAGA
TGTTTACAAGCAGTCAATATCGAGAACAAGTCAATATTCAGGGCGCTAACGCTGTGGATTATGCCTTGATTTTGCCTGGA
AAATCAGAGGGGTCAGAACTCTTACTTCCAATTGACTCAAAATTCCCCATGGAAGATTATCAACGCTTGCAAATGGCTTT
GGAATCTAATGAACCCCTGGAAATTGATAAGACGAGAAAAGCATTGTTTAATGCTGTTAAAGCTCAAGCTAAATCAATCA
GTGAAAAATATATTGTCCCGCCAAAAACAACGGATTTTGCCATTATGTTTTTACCAACTGAAGGGCTGTTTATGGAAGTG
GTTAATAATCCTGAACTTTATGAGCAAATCAGCCGTGACTATAAGATCAATGTGACAGGGCCAACGACGATGACCGCCGT
CTTAAACAGTTTGCAAATGGGCTTTAAAACCTTGCAAATCGAACAAAAATCAGCTGAAGTTTATGAAATGCTAGGAGCAG
TCAAAACAGAGTTTGATAAATTTGAAGATTCATTGAAAAAAGTTCAACAAAAAATTCAGCAATCAGAAAAAGAAATTAAT
AATCTGATTACGACAAGAACAAATGTCATGAAAAAAGCGCTGACGAATATTGACCGGATAGATGATAGTGAAAGCAGCAA
ACTTTTGGATTTAGATTGA

Upstream 100 bases:

>100_bases
TTTTGATACCTTACCAGATCATGAAAAAATTAATAATCAACAAAATCCAGAACTCGTAGTTCAAGAAATTTTAGATAAAG
TAGGAAAATAAAAAATCAAG

Downstream 100 bases:

>100_bases
CAAAGTAATAAATATTTTATATCGCTTGGCTAGGTCACCCAAAGAGTCGGGCTTACATCTTAAAGGAGAAAACATGGTGC
TCATTAAAAACTTAGAAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 432; Mature: 432

Protein sequence:

>432_residues
MEVIIIILLILLILLSLANFFKKTDKGNTSHQLNYLNQNLAEMRSDVNQQLAQNRQELSSSLRSVNNDFATLTENINSKF
DWQFKDLQSSNEQKLEKISVSLVESTDRTVTKLSELTEAMTDKFDRKFKELQDSNDKRLSQIQETVDEKLQETLNRRISQ
SFEQVTLHLKNVEEGLGEMRNLASDVDSLQKVMTGVKTRGIVGEIQLGRILEQMFTSSQYREQVNIQGANAVDYALILPG
KSEGSELLLPIDSKFPMEDYQRLQMALESNEPLEIDKTRKALFNAVKAQAKSISEKYIVPPKTTDFAIMFLPTEGLFMEV
VNNPELYEQISRDYKINVTGPTTMTAVLNSLQMGFKTLQIEQKSAEVYEMLGAVKTEFDKFEDSLKKVQQKIQQSEKEIN
NLITTRTNVMKKALTNIDRIDDSESSKLLDLD

Sequences:

>Translated_432_residues
MEVIIIILLILLILLSLANFFKKTDKGNTSHQLNYLNQNLAEMRSDVNQQLAQNRQELSSSLRSVNNDFATLTENINSKF
DWQFKDLQSSNEQKLEKISVSLVESTDRTVTKLSELTEAMTDKFDRKFKELQDSNDKRLSQIQETVDEKLQETLNRRISQ
SFEQVTLHLKNVEEGLGEMRNLASDVDSLQKVMTGVKTRGIVGEIQLGRILEQMFTSSQYREQVNIQGANAVDYALILPG
KSEGSELLLPIDSKFPMEDYQRLQMALESNEPLEIDKTRKALFNAVKAQAKSISEKYIVPPKTTDFAIMFLPTEGLFMEV
VNNPELYEQISRDYKINVTGPTTMTAVLNSLQMGFKTLQIEQKSAEVYEMLGAVKTEFDKFEDSLKKVQQKIQQSEKEIN
NLITTRTNVMKKALTNIDRIDDSESSKLLDLD
>Mature_432_residues
MEVIIIILLILLILLSLANFFKKTDKGNTSHQLNYLNQNLAEMRSDVNQQLAQNRQELSSSLRSVNNDFATLTENINSKF
DWQFKDLQSSNEQKLEKISVSLVESTDRTVTKLSELTEAMTDKFDRKFKELQDSNDKRLSQIQETVDEKLQETLNRRISQ
SFEQVTLHLKNVEEGLGEMRNLASDVDSLQKVMTGVKTRGIVGEIQLGRILEQMFTSSQYREQVNIQGANAVDYALILPG
KSEGSELLLPIDSKFPMEDYQRLQMALESNEPLEIDKTRKALFNAVKAQAKSISEKYIVPPKTTDFAIMFLPTEGLFMEV
VNNPELYEQISRDYKINVTGPTTMTAVLNSLQMGFKTLQIEQKSAEVYEMLGAVKTEFDKFEDSLKKVQQKIQQSEKEIN
NLITTRTNVMKKALTNIDRIDDSESSKLLDLD

Specific function: Involved in DNA recombination [H]

COG id: COG1322

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rmuC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003798 [H]

Pfam domain/function: PF02646 RmuC [H]

EC number: NA

Molecular weight: Translated: 49337; Mature: 49337

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVIIIILLILLILLSLANFFKKTDKGNTSHQLNYLNQNLAEMRSDVNQQLAQNRQELSS
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLRSVNNDFATLTENINSKFDWQFKDLQSSNEQKLEKISVSLVESTDRTVTKLSELTEAM
HHHHHCCHHHHHHHHCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TDKFDRKFKELQDSNDKRLSQIQETVDEKLQETLNRRISQSFEQVTLHLKNVEEGLGEMR
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NLASDVDSLQKVMTGVKTRGIVGEIQLGRILEQMFTSSQYREQVNIQGANAVDYALILPG
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECC
KSEGSELLLPIDSKFPMEDYQRLQMALESNEPLEIDKTRKALFNAVKAQAKSISEKYIVP
CCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
PKTTDFAIMFLPTEGLFMEVVNNPELYEQISRDYKINVTGPTTMTAVLNSLQMGFKTLQI
CCCCCEEEEEECCCCHHHHHHCCHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHH
EQKSAEVYEMLGAVKTEFDKFEDSLKKVQQKIQQSEKEINNLITTRTNVMKKALTNIDRI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DDSESSKLLDLD
CCCCCCCCCCCC
>Mature Secondary Structure
MEVIIIILLILLILLSLANFFKKTDKGNTSHQLNYLNQNLAEMRSDVNQQLAQNRQELSS
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLRSVNNDFATLTENINSKFDWQFKDLQSSNEQKLEKISVSLVESTDRTVTKLSELTEAM
HHHHHCCHHHHHHHHCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TDKFDRKFKELQDSNDKRLSQIQETVDEKLQETLNRRISQSFEQVTLHLKNVEEGLGEMR
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NLASDVDSLQKVMTGVKTRGIVGEIQLGRILEQMFTSSQYREQVNIQGANAVDYALILPG
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECC
KSEGSELLLPIDSKFPMEDYQRLQMALESNEPLEIDKTRKALFNAVKAQAKSISEKYIVP
CCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
PKTTDFAIMFLPTEGLFMEVVNNPELYEQISRDYKINVTGPTTMTAVLNSLQMGFKTLQI
CCCCCEEEEEECCCCHHHHHHCCHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHH
EQKSAEVYEMLGAVKTEFDKFEDSLKKVQQKIQQSEKEINNLITTRTNVMKKALTNIDRI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DDSESSKLLDLD
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]