Click here to switch to the map view.

The map label for this gene is ps445 [H]

Identifier: 125624869

GI number: 125624869

Start: 2082396

End: 2083100

Strand: Reverse

Name: ps445 [H]

Synonym: llmg_2097

Alternate gene names: 125624869

Gene position: 2083100-2082396 (Counterclockwise)

Preceding gene: 125624870

Following gene: 125624868

Centisome position: 82.35

GC content: 35.04

Gene sequence:

>705_bases
ATGACAGTAATCGACATTAAAGGAGATGTAGTTGATAATAGTTACGGAATGATGTATGACTGGTTTGGAATCGATTATAC
AAGTCCATCTAAAGTTAATGATGCCTTAGTAAATGCTGATGATGAAGAAATTGTTTTAAATATCGCTTCTAATGGCGGAG
ATGTATTTGCAGCTTCTGAGATTTATACTGCTATTAAGATGAATGGTAAACCTGTAACTGTAAATATTCAAGGGTTGGCA
GCATCTGCAGCATCGGTAATTGCAATGGCTGGCGATACGGTAAATATCTCTCCAACAGCCCAATTGATGATTCATAAGGC
TATGAGTGGTAGCCAAGGAAATGCTGACGATTTTGAACAAGAAGCTAAAGTTTTAAATGGCGTTGACCAATCTATTGCTG
CAGCTTATGAATTAAAAACTGGTATGAAACAATCTGACTTATTGCAGTTGATGTCTAACGAAACATGGATGACAGCTCAA
GATGCAGTGGATAAAGGATTTGCAGACAACATTATGTTTGTGGATGCTAATAAACCAGTATTTTCTAACTCAATCGGCAA
TATTCCAACTGCTGATAAACTTAATGAATTTATGAATTTCATGAATTTCAAAAATCGGAATAACCCTCCGAAAGAAGAAC
CAATTATAGAAAACAAACAAGCTGATTTACGTTCTCGTAAGTTGGCTATTTTATTAGAAAAATAA

Upstream 100 bases:

>100_bases
CCCTGAAAATACAAATAAAAAGACAACTGGCCAAAGTAATGAGCCAGTACCATAGGAAAGGAGGTGGTCATGGTGATTAT
TCTTAGAAAGGAGGTAAATG

Downstream 100 bases:

>100_bases
AGGAGACTCAAATGGGAGTTAAATTAACAGTAAATCAATTGAACGAAGCATGGATTGCTTCAGGAGATAAAGTCACAGAC
TTTAATGACCAAATCAACAT

Product: hypothetical protein

Products: NA

Alternate protein names: Endopeptidase Clp [H]

Number of amino acids: Translated: 234; Mature: 233

Protein sequence:

>234_residues
MTVIDIKGDVVDNSYGMMYDWFGIDYTSPSKVNDALVNADDEEIVLNIASNGGDVFAASEIYTAIKMNGKPVTVNIQGLA
ASAASVIAMAGDTVNISPTAQLMIHKAMSGSQGNADDFEQEAKVLNGVDQSIAAAYELKTGMKQSDLLQLMSNETWMTAQ
DAVDKGFADNIMFVDANKPVFSNSIGNIPTADKLNEFMNFMNFKNRNNPPKEEPIIENKQADLRSRKLAILLEK

Sequences:

>Translated_234_residues
MTVIDIKGDVVDNSYGMMYDWFGIDYTSPSKVNDALVNADDEEIVLNIASNGGDVFAASEIYTAIKMNGKPVTVNIQGLA
ASAASVIAMAGDTVNISPTAQLMIHKAMSGSQGNADDFEQEAKVLNGVDQSIAAAYELKTGMKQSDLLQLMSNETWMTAQ
DAVDKGFADNIMFVDANKPVFSNSIGNIPTADKLNEFMNFMNFKNRNNPPKEEPIIENKQADLRSRKLAILLEK
>Mature_233_residues
TVIDIKGDVVDNSYGMMYDWFGIDYTSPSKVNDALVNADDEEIVLNIASNGGDVFAASEIYTAIKMNGKPVTVNIQGLAA
SAASVIAMAGDTVNISPTAQLMIHKAMSGSQGNADDFEQEAKVLNGVDQSIAAAYELKTGMKQSDLLQLMSNETWMTAQD
AVDKGFADNIMFVDANKPVFSNSIGNIPTADKLNEFMNFMNFKNRNNPPKEEPIIENKQADLRSRKLAILLEK

Specific function: Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins [H]

COG id: COG0740

COG function: function code OU; Protease subunit of ATP-dependent Clp proteases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S14 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001907 [H]

Pfam domain/function: PF00574 CLP_protease [H]

EC number: =3.4.21.92 [H]

Molecular weight: Translated: 25443; Mature: 25312

Theoretical pI: Translated: 4.21; Mature: 4.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVIDIKGDVVDNSYGMMYDWFGIDYTSPSKVNDALVNADDEEIVLNIASNGGDVFAASE
CEEEEECCCEECCCCCCEEEEECCCCCCCCCCCHHHCCCCCCEEEEEEECCCCCEEEHHH
IYTAIKMNGKPVTVNIQGLAASAASVIAMAGDTVNISPTAQLMIHKAMSGSQGNADDFEQ
EEEEEEECCEEEEEEECCCHHHHHEEEEECCCEEECCCHHHHHHHHHHCCCCCCHHHHHH
EAKVLNGVDQSIAAAYELKTGMKQSDLLQLMSNETWMTAQDAVDKGFADNIMFVDANKPV
HHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHCCCCEEEHHHHHHCCCCCCEEEEECCCCE
FSNSIGNIPTADKLNEFMNFMNFKNRNNPPKEEPIIENKQADLRSRKLAILLEK
ECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCEEEEEEEC
>Mature Secondary Structure 
TVIDIKGDVVDNSYGMMYDWFGIDYTSPSKVNDALVNADDEEIVLNIASNGGDVFAASE
EEEEECCCEECCCCCCEEEEECCCCCCCCCCCHHHCCCCCCEEEEEEECCCCCEEEHHH
IYTAIKMNGKPVTVNIQGLAASAASVIAMAGDTVNISPTAQLMIHKAMSGSQGNADDFEQ
EEEEEEECCEEEEEEECCCHHHHHEEEEECCCEEECCCHHHHHHHHHHCCCCCCHHHHHH
EAKVLNGVDQSIAAAYELKTGMKQSDLLQLMSNETWMTAQDAVDKGFADNIMFVDANKPV
HHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHCCCCEEEHHHHHHCCCCCCEEEEECCCCE
FSNSIGNIPTADKLNEFMNFMNFKNRNNPPKEEPIIENKQADLRSRKLAILLEK
ECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10567266 [H]