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The map label for this gene is yfnB [H]

Identifier: 125624807

GI number: 125624807

Start: 2017879

End: 2018565

Strand: Reverse

Name: yfnB [H]

Synonym: llmg_2034

Alternate gene names: 125624807

Gene position: 2018565-2017879 (Counterclockwise)

Preceding gene: 125624808

Following gene: 125624804

Centisome position: 79.8

GC content: 32.17

Gene sequence:

>687_bases
ATGACAGAAATAAAAAACATTATTTTTGATTGGGACAATACACTTTTCCCTTTTAAAGAAAAATATTGGGAATTAGCCCA
CCGACAACTTTTTTCAGAACAATTAGGCCCATTTACTGATCAGGAACTCAATCATTTTATGGAGAAATATCACGAATTTG
ATGAATTGCTCTGGCCCCAAGTTCATCAAAGACAGATGACCATTGAAGAGTTAAGAGAAGAAAGATTACGCTTGACTCTC
GAATATTTTGACTTGGAGATTGATGAAATTTATCTTAGGGCTTTCTTCAAAAATTTTTTGAACAGATTATTTGAGTTGAT
AGAACCTGATGAGCAACTCATTCAAAATTTGAAAAATCTTTCAAAAAAATATCAACTTGCACTATTAAGTAATAGTGGAC
GTGTTGAACAAAGAGAGAAATTACGGCGTTCAAATGTTGAAGAATTATTTCCAGTTTATATTTCAGGAGAAACAGGCTAT
TTAAAACCAGACGCGCGTGCTTTTACAAATTTACTGAACAAGGAAAATTTTAAAGCTAGTGAAACCTTAATGGTTGGAGA
TTTACTAGAACATGATATAAAGCCAGCTAAAGATTTAGGACTTCAAACAGCCTATATTGGGGCAGAAAAAGGAACCATTG
CTGACTATGAGTTTGAAACAATTCAAGAATTATTTAATTCATTATAA

Upstream 100 bases:

>100_bases
ACTTAGGACTAGACTCAACTTTTCATCAGTAGCTTTTTTTTTCTTGTAGAATAAATCAAAAGCTGATAAAATAGGCTTAA
ATATGGAATGAGGGAAATAG

Downstream 100 bases:

>100_bases
GATAAAAAAACGATTAATAATCGTTTTTTAATTTTTATCAATTTTTAAAGCATTAGTAGTCAAATAGATTTGCTCGACTG
GCGCATGGGTTAATCTATAG

Product: HAD superfamily hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MTEIKNIIFDWDNTLFPFKEKYWELAHRQLFSEQLGPFTDQELNHFMEKYHEFDELLWPQVHQRQMTIEELREERLRLTL
EYFDLEIDEIYLRAFFKNFLNRLFELIEPDEQLIQNLKNLSKKYQLALLSNSGRVEQREKLRRSNVEELFPVYISGETGY
LKPDARAFTNLLNKENFKASETLMVGDLLEHDIKPAKDLGLQTAYIGAEKGTIADYEFETIQELFNSL

Sequences:

>Translated_228_residues
MTEIKNIIFDWDNTLFPFKEKYWELAHRQLFSEQLGPFTDQELNHFMEKYHEFDELLWPQVHQRQMTIEELREERLRLTL
EYFDLEIDEIYLRAFFKNFLNRLFELIEPDEQLIQNLKNLSKKYQLALLSNSGRVEQREKLRRSNVEELFPVYISGETGY
LKPDARAFTNLLNKENFKASETLMVGDLLEHDIKPAKDLGLQTAYIGAEKGTIADYEFETIQELFNSL
>Mature_227_residues
TEIKNIIFDWDNTLFPFKEKYWELAHRQLFSEQLGPFTDQELNHFMEKYHEFDELLWPQVHQRQMTIEELREERLRLTLE
YFDLEIDEIYLRAFFKNFLNRLFELIEPDEQLIQNLKNLSKKYQLALLSNSGRVEQREKLRRSNVEELFPVYISGETGYL
KPDARAFTNLLNKENFKASETLMVGDLLEHDIKPAKDLGLQTAYIGAEKGTIADYEFETIQELFNSL

Specific function: Unknown

COG id: COG1011

COG function: function code R; Predicted hydrolase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. YjjG family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006439
- InterPro:   IPR011951 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 27300; Mature: 27169

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEIKNIIFDWDNTLFPFKEKYWELAHRQLFSEQLGPFTDQELNHFMEKYHEFDELLWPQ
CCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
VHQRQMTIEELREERLRLTLEYFDLEIDEIYLRAFFKNFLNRLFELIEPDEQLIQNLKNL
HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
SKKYQLALLSNSGRVEQREKLRRSNVEELFPVYISGETGYLKPDARAFTNLLNKENFKAS
HHHHHHHEECCCCCHHHHHHHHHCCHHHHCCEEECCCCCCCCCHHHHHHHHHCCCCCCHH
ETLMVGDLLEHDIKPAKDLGLQTAYIGAEKGTIADYEFETIQELFNSL
HHHHHHHHHHHCCCCHHHCCCHHHEECCCCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
TEIKNIIFDWDNTLFPFKEKYWELAHRQLFSEQLGPFTDQELNHFMEKYHEFDELLWPQ
CCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
VHQRQMTIEELREERLRLTLEYFDLEIDEIYLRAFFKNFLNRLFELIEPDEQLIQNLKNL
HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
SKKYQLALLSNSGRVEQREKLRRSNVEELFPVYISGETGYLKPDARAFTNLLNKENFKAS
HHHHHHHEECCCCCHHHHHHHHHCCHHHHCCEEECCCCCCCCCHHHHHHHHHCCCCCCHH
ETLMVGDLLEHDIKPAKDLGLQTAYIGAEKGTIADYEFETIQELFNSL
HHHHHHHHHHHCCCCHHHCCCHHHEECCCCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9141694; 9384377 [H]