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The map label for this gene is 125624782

Identifier: 125624782

GI number: 125624782

Start: 1992989

End: 1993570

Strand: Reverse

Name: 125624782

Synonym: llmg_2007

Alternate gene names: NA

Gene position: 1993570-1992989 (Counterclockwise)

Preceding gene: 125624783

Following gene: 125624780

Centisome position: 78.81

GC content: 35.05

Gene sequence:

>582_bases
ATGGATAAATTAAAAGAAATTTTTGAAGCCATCAAAGCAGATCCGCAAAATATAAATTACACAAAGGAAGGAATTGAACC
ACTTTATTCTGTTCATAAAGAAGCCAAAATTTGTATCATAGGACAAGCACCGGGCATTAGAGCGCAGGAATCACGCCTCT
TTTGGAACGATCCATCAGGAGAACGTTTGCGTGACTGGCTAGGAATTGACCGAGAAACATTTTATCAATCGAATAAAATT
TCAATTTTACCTTTAGATTTCTATTTTCCAGGGAAAGGAAAATCAGGGGATTTGCCCCCTCGAAAAGGCTTTGCCGAAAA
ATGGCATGAACAGCTTTTGCAACAAATGCCAGAAATTGAACTTTTTGTTTTGGTTGGATCTTATGCGATAAAATACTATT
TAAATCTAAAATCGTCAGCAAAAACAACAGAAGTGATTCGTGATTTTGAAAAATATCTGCCAAAATATTTTCCACTTATT
CACCCTAGTCCAAGAAATAATATTTGGCTAGCCAAAAATCCTTGGTTTGAGCCTCAACTTGTACCAGAACTTCAAAAAAG
AATTGCACAATTAATGAAATAA

Upstream 100 bases:

>100_bases
AGAAAAAGCAAAAGGATGAGAATACTAAGAAATTTTTGTCAGTAAATATAATCAAACAAGCGTAATCTATAAATTTAGAT
TACGCTTTTAAGGAAAGAAA

Downstream 100 bases:

>100_bases
ATTATAAATATATAAACAGTAATAAAAAAGTTACTAACAGGGTTGTTAGTAACTTTTTTATATGACTGCCTCTTTAATCC
GTGGATAATTTTTCCTGATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MDKLKEIFEAIKADPQNINYTKEGIEPLYSVHKEAKICIIGQAPGIRAQESRLFWNDPSGERLRDWLGIDRETFYQSNKI
SILPLDFYFPGKGKSGDLPPRKGFAEKWHEQLLQQMPEIELFVLVGSYAIKYYLNLKSSAKTTEVIRDFEKYLPKYFPLI
HPSPRNNIWLAKNPWFEPQLVPELQKRIAQLMK

Sequences:

>Translated_193_residues
MDKLKEIFEAIKADPQNINYTKEGIEPLYSVHKEAKICIIGQAPGIRAQESRLFWNDPSGERLRDWLGIDRETFYQSNKI
SILPLDFYFPGKGKSGDLPPRKGFAEKWHEQLLQQMPEIELFVLVGSYAIKYYLNLKSSAKTTEVIRDFEKYLPKYFPLI
HPSPRNNIWLAKNPWFEPQLVPELQKRIAQLMK
>Mature_193_residues
MDKLKEIFEAIKADPQNINYTKEGIEPLYSVHKEAKICIIGQAPGIRAQESRLFWNDPSGERLRDWLGIDRETFYQSNKI
SILPLDFYFPGKGKSGDLPPRKGFAEKWHEQLLQQMPEIELFVLVGSYAIKYYLNLKSSAKTTEVIRDFEKYLPKYFPLI
HPSPRNNIWLAKNPWFEPQLVPELQKRIAQLMK

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005122 [H]

Pfam domain/function: PF03167 UDG [H]

EC number: NA

Molecular weight: Translated: 22612; Mature: 22612

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKLKEIFEAIKADPQNINYTKEGIEPLYSVHKEAKICIIGQAPGIRAQESRLFWNDPSG
CCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEECCCCH
ERLRDWLGIDRETFYQSNKISILPLDFYFPGKGKSGDLPPRKGFAEKWHEQLLQQMPEIE
HHHHHHHCCCHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCE
LFVLVGSYAIKYYLNLKSSAKTTEVIRDFEKYLPKYFPLIHPSPRNNIWLAKNPWFEPQL
EEEEEHHHEEEHEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCH
VPELQKRIAQLMK
HHHHHHHHHHHCC
>Mature Secondary Structure
MDKLKEIFEAIKADPQNINYTKEGIEPLYSVHKEAKICIIGQAPGIRAQESRLFWNDPSG
CCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEECCCCH
ERLRDWLGIDRETFYQSNKISILPLDFYFPGKGKSGDLPPRKGFAEKWHEQLLQQMPEIE
HHHHHHHCCCHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCE
LFVLVGSYAIKYYLNLKSSAKTTEVIRDFEKYLPKYFPLIHPSPRNNIWLAKNPWFEPQL
EEEEEHHHEEEHEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCH
VPELQKRIAQLMK
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]