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The map label for this gene is yffB [H]

Identifier: 125624777

GI number: 125624777

Start: 1990003

End: 1990467

Strand: Reverse

Name: yffB [H]

Synonym: llmg_2002

Alternate gene names: 125624777

Gene position: 1990467-1990003 (Counterclockwise)

Preceding gene: 125624778

Following gene: 125624776

Centisome position: 78.69

GC content: 35.05

Gene sequence:

>465_bases
ATGAAACTGTCCAAACATTTAGAGGAAGCCGTTTACGTTTTACTAATTTTAGCGACTCAAAAAGACCAACAAGCCTTGAA
AAGTAAAACGCTCAGCAATTTATTGGAAGTTTCCGACTCCTCTCTAAAAAAAGTATTAAGGCAATTAGTGGTAAATAATT
TAATAGAGTCTACAGCAAGTAAGGATGGTGGCTTTAAGCTTAAAAAAAGAATAAATGAAATTTCGTTAAAGGACGTAATG
GCTGCAGTAGAGGGGGAAGAATTCATTAGTGCTGACCTTAGTCATATTGGGCAGCGCATCTTTCCAAATAAAGCACACAC
ACTTGAGAGTGAGAGTCTAGTGATTGAAACTTTAACTAAAGCTCAAAATCTTTATGCACTAGAATTAGAGAAATTAAAGC
TTAGTGATTTATTGTTAGCCGAAGCGATGGATAATAAGACTTTAGACTGGCTAAAAAGAGAATGA

Upstream 100 bases:

>100_bases
TGGTTCCCTTATTCAATATTTTGGGAGTTTTTTCTAAAAATATAAAACCTATCAGAGTAGAAAAAGTTGTAAAAGAAATG
ATTGAGGGATTGGAAAATAA

Downstream 100 bases:

>100_bases
GTTCTCTTTTTAGCCGTAGCAAAACACCTTTTAGGTGTTTTTTTATATTTATAGACTTTACAAACGCCAGTAGATTTTAT
CTATGCTTTTTTAGAGGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MKLSKHLEEAVYVLLILATQKDQQALKSKTLSNLLEVSDSSLKKVLRQLVVNNLIESTASKDGGFKLKKRINEISLKDVM
AAVEGEEFISADLSHIGQRIFPNKAHTLESESLVIETLTKAQNLYALELEKLKLSDLLLAEAMDNKTLDWLKRE

Sequences:

>Translated_154_residues
MKLSKHLEEAVYVLLILATQKDQQALKSKTLSNLLEVSDSSLKKVLRQLVVNNLIESTASKDGGFKLKKRINEISLKDVM
AAVEGEEFISADLSHIGQRIFPNKAHTLESESLVIETLTKAQNLYALELEKLKLSDLLLAEAMDNKTLDWLKRE
>Mature_154_residues
MKLSKHLEEAVYVLLILATQKDQQALKSKTLSNLLEVSDSSLKKVLRQLVVNNLIESTASKDGGFKLKKRINEISLKDVM
AAVEGEEFISADLSHIGQRIFPNKAHTLESESLVIETLTKAQNLYALELEKLKLSDLLLAEAMDNKTLDWLKRE

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 17318; Mature: 17318

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLSKHLEEAVYVLLILATQKDQQALKSKTLSNLLEVSDSSLKKVLRQLVVNNLIESTAS
CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
KDGGFKLKKRINEISLKDVMAAVEGEEFISADLSHIGQRIFPNKAHTLESESLVIETLTK
CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHH
AQNLYALELEKLKLSDLLLAEAMDNKTLDWLKRE
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCC
>Mature Secondary Structure
MKLSKHLEEAVYVLLILATQKDQQALKSKTLSNLLEVSDSSLKKVLRQLVVNNLIESTAS
CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
KDGGFKLKKRINEISLKDVMAAVEGEEFISADLSHIGQRIFPNKAHTLESESLVIETLTK
CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHH
AQNLYALELEKLKLSDLLLAEAMDNKTLDWLKRE
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7773380; 11337471 [H]