Click here to switch to the map view.

The map label for this gene is codZ [H]

Identifier: 125624761

GI number: 125624761

Start: 1970414

End: 1971013

Strand: Reverse

Name: codZ [H]

Synonym: llmg_1983

Alternate gene names: 125624761

Gene position: 1971013-1970414 (Counterclockwise)

Preceding gene: 125624764

Following gene: 125624760

Centisome position: 77.92

GC content: 29.83

Gene sequence:

>600_bases
TTGAAGGAAATTTATGACAAAATAAAAGAGATTAATGTCACTTTGAAAAGATCATTTATCGATCTCGAAAAATCATTACC
TTATCAAGATGTTGCGGAGAAAAGTGCTAAAATTTTAGAATGTACACTTTTTATGATAGATACAAAACGCAATTTTCTTG
GTTACGGTTTTTCTGAAAAATTCTATCAGTCTGATATGAACCTCCAGAACTTTTTTACTTATCAAAAAATTTCCAAAGAA
CTATCTACAGAAATTTTAAATCAATATGAAATGAGTGAAAGCGAACAAATGACTCATTCAATTTTGAAATCAGTAAAAGA
ACTCTCAGGAAAATTTGCTAATCAATATTTGACTCTTATTCCTATTGAAGGGAATCATCTAAGATTAGGAACTGTTTTTC
TCTTGACTGATGCACCATTAAATCAAGAAGAAGCAATCTTGGCAGATTTTCTATCAACATTTATCGGAAATCAAATGTCT
TATATTATGCTGTCAGAGCTGGAAACCAAACGGCGAAATGAAACCTTTGTTTCATTGGTTCAATCCTTATCTCGTTCAGA
ATTAGAAGCCTTTAAAAGTATTATTGAAAAAATTGAATGA

Upstream 100 bases:

>100_bases
AAATTCGTTAAGAAAATTGACATCTTAAACGTTATATGGTAGTATAAAAGTAATCATAGGAATACTCATTGCCTTTTATG
GGTAGAGAAAGGGAGAGAAG

Downstream 100 bases:

>100_bases
TAAGCTAGATAAGCCTTGAAAATTTCTACAATAAATAGTATAATAGAAATAATGGTTTGTCAGCAAAATCTGTGGGATAT
ATTGTCCCCATAGGCTTTGT

Product: CodY family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MKEIYDKIKEINVTLKRSFIDLEKSLPYQDVAEKSAKILECTLFMIDTKRNFLGYGFSEKFYQSDMNLQNFFTYQKISKE
LSTEILNQYEMSESEQMTHSILKSVKELSGKFANQYLTLIPIEGNHLRLGTVFLLTDAPLNQEEAILADFLSTFIGNQMS
YIMLSELETKRRNETFVSLVQSLSRSELEAFKSIIEKIE

Sequences:

>Translated_199_residues
MKEIYDKIKEINVTLKRSFIDLEKSLPYQDVAEKSAKILECTLFMIDTKRNFLGYGFSEKFYQSDMNLQNFFTYQKISKE
LSTEILNQYEMSESEQMTHSILKSVKELSGKFANQYLTLIPIEGNHLRLGTVFLLTDAPLNQEEAILADFLSTFIGNQMS
YIMLSELETKRRNETFVSLVQSLSRSELEAFKSIIEKIE
>Mature_199_residues
MKEIYDKIKEINVTLKRSFIDLEKSLPYQDVAEKSAKILECTLFMIDTKRNFLGYGFSEKFYQSDMNLQNFFTYQKISKE
LSTEILNQYEMSESEQMTHSILKSVKELSGKFANQYLTLIPIEGNHLRLGTVFLLTDAPLNQEEAILADFLSTFIGNQMS
YIMLSELETKRRNETFVSLVQSLSRSELEAFKSIIEKIE

Specific function: DNA-binding protein that represses the expression of many genes essential for supplying Lactococcus lactis with amino acids during growth in milk. Seem to act on the major components of the proteolytic system, including the cell wall proteinase (PrtP), th

COG id: COG4465

COG function: function code K; Pleiotropic transcriptional repressor

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CodY family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014154
- InterPro:   IPR010312
- InterPro:   IPR013198
- InterPro:   IPR011991 [H]

Pfam domain/function: PF06018 CodY; PF08222 HTH_CodY [H]

EC number: NA

Molecular weight: Translated: 23151; Mature: 23151

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEIYDKIKEINVTLKRSFIDLEKSLPYQDVAEKSAKILECTLFMIDTKRNFLGYGFSEK
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEECCCHHHCCCCHHH
FYQSDMNLQNFFTYQKISKELSTEILNQYEMSESEQMTHSILKSVKELSGKFANQYLTLI
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCEEEEE
PIEGNHLRLGTVFLLTDAPLNQEEAILADFLSTFIGNQMSYIMLSELETKRRNETFVSLV
EECCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
QSLSRSELEAFKSIIEKIE
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKEIYDKIKEINVTLKRSFIDLEKSLPYQDVAEKSAKILECTLFMIDTKRNFLGYGFSEK
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHEEECCCHHHCCCCHHH
FYQSDMNLQNFFTYQKISKELSTEILNQYEMSESEQMTHSILKSVKELSGKFANQYLTLI
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCEEEEE
PIEGNHLRLGTVFLLTDAPLNQEEAILADFLSTFIGNQMSYIMLSELETKRRNETFVSLV
EECCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
QSLSRSELEAFKSIIEKIE
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11337471; 11401725 [H]