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The map label for this gene is sufC [C]

Identifier: 125624752

GI number: 125624752

Start: 1955617

End: 1956387

Strand: Reverse

Name: sufC [C]

Synonym: llmg_1974

Alternate gene names: 125624752

Gene position: 1956387-1955617 (Counterclockwise)

Preceding gene: 125624754

Following gene: 125624751

Centisome position: 77.34

GC content: 37.61

Gene sequence:

>771_bases
ATGGCTACACTTGAAATTAAAAATCTTCATGTGGCGATTGAAGATAAAGAGATTCTCAAAGGAGTCAACCTAGTCATCAA
TACCAATGAAATTCATGCAATTATGGGACCTAACGGAACTGGTAAATCGACTTTATCGGCAGCGATTATGGGGAACCCTA
ATTATACCGTCACTGAGGGAGAAGTTCTTTTTGATGGTCAAAATGTTTTAGAGATGGAAGTTGATGAAAGAGCTCGTTTA
GGCCTATTTCTTGCAATGCAATATCCATCTGAAATTCCAGGAATCACTAATGCAGAATTTTTACGGGCAGCAATGAATGC
CAAACGTGCTGAAGATGATAAAGTTTCTGTCATGGAATTTATCAAAAAATTGGATAAAAATATGGATGTCTTGAGCATGA
AAGAAGAGATGGCGGAACGTTATCTCAATGAAGGATTTTCTGGTGGTGAAAAGAAACGAAATGAAATTCTACAACTTTTG
ATGTTAGAACCAACTTTTGCTATTCTTGATGAAATTGACTCAGGACTTGATATTGACGCTTTAAAAGTCGTTGCAAAAGG
TGTTAATTCAATGCGTGGCGAGAAATTTGGTGCATTGATTATCACACATTACCAACGTTTGCTTGATTACATTACACCTG
ATGTTGTCCACATCATGATGGATGGTCGTGTGGTGAAAACCGGTGGCGCTGAATTGGCCAAACGTCTGGAAACTGAAGGA
TATGTCAATATTGCTGAGGAACTTGGACTAGAATATAAAGAAGAAGTTTAA

Upstream 100 bases:

>100_bases
ATAAAAATAATATAAGTGAAAATAACAAATTTTATCAATTTTTTGTTAGAATAGAGACTATAAATGTCAAATACAATTGA
CAATTCAAAGGAGCGAAAAA

Downstream 100 bases:

>100_bases
GGAAAGGAGCTAGTAAGTCTATTTTTATCTACTGACAAAGCTGTCAGTAAGTTTAAATGTTCATCAATTTACTGACAGAA
TAATTTGTCAATAAATCGAT

Product: ATP-dependent transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 255

Protein sequence:

>256_residues
MATLEIKNLHVAIEDKEILKGVNLVINTNEIHAIMGPNGTGKSTLSAAIMGNPNYTVTEGEVLFDGQNVLEMEVDERARL
GLFLAMQYPSEIPGITNAEFLRAAMNAKRAEDDKVSVMEFIKKLDKNMDVLSMKEEMAERYLNEGFSGGEKKRNEILQLL
MLEPTFAILDEIDSGLDIDALKVVAKGVNSMRGEKFGALIITHYQRLLDYITPDVVHIMMDGRVVKTGGAELAKRLETEG
YVNIAEELGLEYKEEV

Sequences:

>Translated_256_residues
MATLEIKNLHVAIEDKEILKGVNLVINTNEIHAIMGPNGTGKSTLSAAIMGNPNYTVTEGEVLFDGQNVLEMEVDERARL
GLFLAMQYPSEIPGITNAEFLRAAMNAKRAEDDKVSVMEFIKKLDKNMDVLSMKEEMAERYLNEGFSGGEKKRNEILQLL
MLEPTFAILDEIDSGLDIDALKVVAKGVNSMRGEKFGALIITHYQRLLDYITPDVVHIMMDGRVVKTGGAELAKRLETEG
YVNIAEELGLEYKEEV
>Mature_255_residues
ATLEIKNLHVAIEDKEILKGVNLVINTNEIHAIMGPNGTGKSTLSAAIMGNPNYTVTEGEVLFDGQNVLEMEVDERARLG
LFLAMQYPSEIPGITNAEFLRAAMNAKRAEDDKVSVMEFIKKLDKNMDVLSMKEEMAERYLNEGFSGGEKKRNEILQLLM
LEPTFAILDEIDSGLDIDALKVVAKGVNSMRGEKFGALIITHYQRLLDYITPDVVHIMMDGRVVKTGGAELAKRLETEGY
VNIAEELGLEYKEEV

Specific function: Unknown

COG id: COG0396

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, ATPase component

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI148612844, Length=231, Percent_Identity=28.1385281385281, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI255708477, Length=231, Percent_Identity=28.1385281385281, Blast_Score=75, Evalue=8e-14,
Organism=Homo sapiens, GI42741659, Length=221, Percent_Identity=27.1493212669683, Blast_Score=68, Evalue=8e-12,
Organism=Homo sapiens, GI9961250, Length=253, Percent_Identity=27.2727272727273, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI4505771, Length=253, Percent_Identity=27.2727272727273, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI9961252, Length=253, Percent_Identity=27.2727272727273, Blast_Score=67, Evalue=2e-11,
Organism=Escherichia coli, GI1787972, Length=246, Percent_Identity=52.0325203252033, Blast_Score=263, Evalue=7e-72,
Organism=Escherichia coli, GI1789593, Length=212, Percent_Identity=27.3584905660377, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI1787500, Length=243, Percent_Identity=30.4526748971193, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1788225, Length=239, Percent_Identity=26.3598326359833, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1788761, Length=204, Percent_Identity=25, Blast_Score=64, Evalue=9e-12,
Organism=Escherichia coli, GI1787029, Length=231, Percent_Identity=26.4069264069264, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1790162, Length=213, Percent_Identity=25.3521126760563, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1786698, Length=203, Percent_Identity=27.5862068965517, Blast_Score=61, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI212646699, Length=242, Percent_Identity=28.5123966942149, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI71996809, Length=228, Percent_Identity=28.0701754385965, Blast_Score=77, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI193209708, Length=234, Percent_Identity=26.9230769230769, Blast_Score=71, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI25146777, Length=224, Percent_Identity=25.8928571428571, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17565938, Length=243, Percent_Identity=28.3950617283951, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17541710, Length=232, Percent_Identity=25.8620689655172, Blast_Score=65, Evalue=5e-11,
Organism=Saccharomyces cerevisiae, GI6324498, Length=197, Percent_Identity=27.4111675126904, Blast_Score=67, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24641342, Length=259, Percent_Identity=24.3243243243243, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI281363262, Length=220, Percent_Identity=29.5454545454545, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24653245, Length=220, Percent_Identity=29.5454545454545, Blast_Score=66, Evalue=3e-11,
Organism=Drosophila melanogaster, GI21357907, Length=220, Percent_Identity=26.3636363636364, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI85726357, Length=225, Percent_Identity=27.5555555555556, Blast_Score=64, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR010230 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 28468; Mature: 28337

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATLEIKNLHVAIEDKEILKGVNLVINTNEIHAIMGPNGTGKSTLSAAIMGNPNYTVTEG
CCEEEEEEEEEEECCHHHHCCCEEEEECCCEEEEECCCCCCCHHEEEEEECCCCEEEECC
EVLFDGQNVLEMEVDERARLGLFLAMQYPSEIPGITNAEFLRAAMNAKRAEDDKVSVMEF
EEEECCCCEEEEECCCHHHHCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHH
IKKLDKNMDVLSMKEEMAERYLNEGFSGGEKKRNEILQLLMLEPTFAILDEIDSGLDIDA
HHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHH
LKVVAKGVNSMRGEKFGALIITHYQRLLDYITPDVVHIMMDGRVVKTGGAELAKRLETEG
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHEEEEECCEEEECCHHHHHHHHCCCC
YVNIAEELGLEYKEEV
CEEEHHHCCCCHHCCC
>Mature Secondary Structure 
ATLEIKNLHVAIEDKEILKGVNLVINTNEIHAIMGPNGTGKSTLSAAIMGNPNYTVTEG
CEEEEEEEEEEECCHHHHCCCEEEEECCCEEEEECCCCCCCHHEEEEEECCCCEEEECC
EVLFDGQNVLEMEVDERARLGLFLAMQYPSEIPGITNAEFLRAAMNAKRAEDDKVSVMEF
EEEECCCCEEEEECCCHHHHCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHH
IKKLDKNMDVLSMKEEMAERYLNEGFSGGEKKRNEILQLLMLEPTFAILDEIDSGLDIDA
HHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHH
LKVVAKGVNSMRGEKFGALIITHYQRLLDYITPDVVHIMMDGRVVKTGGAELAKRLETEG
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHEEEEECCEEEECCHHHHHHHHCCCC
YVNIAEELGLEYKEEV
CEEEHHHCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12122206; 12799345 [H]