| Definition | Lactococcus lactis subsp. cremoris MG1363, complete genome. |
|---|---|
| Accession | NC_009004 |
| Length | 2,529,478 |
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The map label for this gene is yhaQ [H]
Identifier: 125624735
GI number: 125624735
Start: 1939205
End: 1940137
Strand: Reverse
Name: yhaQ [H]
Synonym: llmg_1957
Alternate gene names: 125624735
Gene position: 1940137-1939205 (Counterclockwise)
Preceding gene: 125624736
Following gene: 125624734
Centisome position: 76.7
GC content: 38.26
Gene sequence:
>933_bases ATGACATTAAAGATTGACAAAGTTCGCAAAAACTTTGGTGATAAAATTGCTGTTGACAATCTCAATATGGTGGTTAAACC AGGCGAAGTTATGGGCTTAATTGGTCAAAATGGTGCAGGTAAAACAACAACTTTTCGGATGATTCTTAATTTTATATCAG CTGACCAAGGAAGAATTACTTGGCAAGATGGCCCGATAAATCAAGAAATTAAACAAAAAATTGGTTTTTTACCCGAAGAG CGGGGCCTCTATCAAAAAATGACGGTAGAGGATCAAATTCTTTATTTTGCCGAACTACATGGGATGAAACGGGCAGATGC ACGTCTAAAACTTCAAGATTGGATGAAACGCTTAGAAGTTGTTGGAAAACCAATGGATAAAGTTCAGACACTCTCAAAAG GGAATGCCCAAAAAATTCAATTTATCGCAACTTTGATTCATGAGCCTGAATTTTTGATTTTAGACGAACCATTCACAGGA CTTGATCCTGTAAATACAGAACTTTTGCGAAATGAAATTAAGCGAAGTCGTGATAAGGGATCAGCAGTTATTTTCTCTAA TCATAATATGAGTGATGTTGAGCTCTTATCTGACCACTTGCTGATGCTAAAAGGTGGGCAAACGATATTGAATGGTACTG TTGAAGATATCAGAGCTTCTTATGGTCGGACCCGTGTTTATTTGGAATCGGACCTATCAAATGATGAACTCTCCTTAATT TCAGGAGTTGAGTCAATTGAAAAAAGAGGGAGTGGCCGTTCAATTAAAATTTCTGAAGCAAATGTTGGTCGTGAAATTTT TCAAAAAGTAGCCAAAGATGGCTATGTTCAAGCCTTTGTTCAATCCCCTCCCTCCCTTGATGAAATTTTCCGAATGGAAG TGGCTGAGCATGATCAAGAAGACCTAAGCGCGAAAAGTGGGGTGGCGAAATGA
Upstream 100 bases:
>100_bases CAAAATTAACAAATTTTTGTCTTACCTATTCAAAGAAAAGTAGGTGAAAAGTGAAAATAAAATGATATAATTAGAAAAAA AGGGAAGTGTAAGGAAAATT
Downstream 100 bases:
>100_bases AAAATCAAACTTGGCTTGTTGCAAAAAATATTTATCGTAGTCGCATCAAAGGAGTTGGTTTTTGGGCTCTCGTTCTTTCT CCTTTTTTATTAGGAGCAGT
Product: ABC transporter, ATP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 310; Mature: 309
Protein sequence:
>310_residues MTLKIDKVRKNFGDKIAVDNLNMVVKPGEVMGLIGQNGAGKTTTFRMILNFISADQGRITWQDGPINQEIKQKIGFLPEE RGLYQKMTVEDQILYFAELHGMKRADARLKLQDWMKRLEVVGKPMDKVQTLSKGNAQKIQFIATLIHEPEFLILDEPFTG LDPVNTELLRNEIKRSRDKGSAVIFSNHNMSDVELLSDHLLMLKGGQTILNGTVEDIRASYGRTRVYLESDLSNDELSLI SGVESIEKRGSGRSIKISEANVGREIFQKVAKDGYVQAFVQSPPSLDEIFRMEVAEHDQEDLSAKSGVAK
Sequences:
>Translated_310_residues MTLKIDKVRKNFGDKIAVDNLNMVVKPGEVMGLIGQNGAGKTTTFRMILNFISADQGRITWQDGPINQEIKQKIGFLPEE RGLYQKMTVEDQILYFAELHGMKRADARLKLQDWMKRLEVVGKPMDKVQTLSKGNAQKIQFIATLIHEPEFLILDEPFTG LDPVNTELLRNEIKRSRDKGSAVIFSNHNMSDVELLSDHLLMLKGGQTILNGTVEDIRASYGRTRVYLESDLSNDELSLI SGVESIEKRGSGRSIKISEANVGREIFQKVAKDGYVQAFVQSPPSLDEIFRMEVAEHDQEDLSAKSGVAK >Mature_309_residues TLKIDKVRKNFGDKIAVDNLNMVVKPGEVMGLIGQNGAGKTTTFRMILNFISADQGRITWQDGPINQEIKQKIGFLPEER GLYQKMTVEDQILYFAELHGMKRADARLKLQDWMKRLEVVGKPMDKVQTLSKGNAQKIQFIATLIHEPEFLILDEPFTGL DPVNTELLRNEIKRSRDKGSAVIFSNHNMSDVELLSDHLLMLKGGQTILNGTVEDIRASYGRTRVYLESDLSNDELSLIS GVESIEKRGSGRSIKISEANVGREIFQKVAKDGYVQAFVQSPPSLDEIFRMEVAEHDQEDLSAKSGVAK
Specific function: Unknown
COG id: COG4152
COG function: function code R; ABC-type uncharacterized transport system, ATPase component
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI116734710, Length=226, Percent_Identity=32.3008849557522, Blast_Score=122, Evalue=3e-28, Organism=Homo sapiens, GI153792144, Length=217, Percent_Identity=29.0322580645161, Blast_Score=121, Evalue=1e-27, Organism=Homo sapiens, GI45446740, Length=222, Percent_Identity=30.6306306306306, Blast_Score=115, Evalue=4e-26, Organism=Homo sapiens, GI47078218, Length=222, Percent_Identity=30.6306306306306, Blast_Score=115, Evalue=4e-26, Organism=Homo sapiens, GI27477115, Length=221, Percent_Identity=28.9592760180996, Blast_Score=114, Evalue=1e-25, Organism=Homo sapiens, GI30795238, Length=224, Percent_Identity=29.0178571428571, Blast_Score=113, Evalue=2e-25, Organism=Homo sapiens, GI27881501, Length=224, Percent_Identity=29.0178571428571, Blast_Score=113, Evalue=2e-25, Organism=Homo sapiens, GI6005701, Length=216, Percent_Identity=27.3148148148148, Blast_Score=112, Evalue=5e-25, Organism=Homo sapiens, GI27436953, Length=213, Percent_Identity=26.7605633802817, Blast_Score=108, Evalue=5e-24, Organism=Homo sapiens, GI105990541, Length=210, Percent_Identity=32.3809523809524, Blast_Score=108, Evalue=5e-24, Organism=Homo sapiens, GI31657092, Length=222, Percent_Identity=27.9279279279279, Blast_Score=104, Evalue=8e-23, Organism=Homo sapiens, GI21536376, Length=217, Percent_Identity=28.110599078341, Blast_Score=100, Evalue=3e-21, Organism=Homo sapiens, GI150417984, Length=209, Percent_Identity=27.7511961722488, Blast_Score=98, Evalue=8e-21, Organism=Homo sapiens, GI27262624, Length=294, Percent_Identity=24.4897959183673, Blast_Score=96, Evalue=5e-20, Organism=Homo sapiens, GI27262626, Length=294, Percent_Identity=24.4897959183673, Blast_Score=96, Evalue=5e-20, Organism=Homo sapiens, GI21536378, Length=242, Percent_Identity=26.0330578512397, Blast_Score=66, Evalue=5e-11, Organism=Escherichia coli, GI1789593, Length=237, Percent_Identity=28.2700421940928, Blast_Score=119, Evalue=3e-28, Organism=Escherichia coli, GI87081782, Length=216, Percent_Identity=29.1666666666667, Blast_Score=113, Evalue=1e-26, Organism=Escherichia coli, GI1786319, Length=223, Percent_Identity=26.0089686098655, Blast_Score=104, Evalue=7e-24, Organism=Escherichia coli, GI48994943, Length=211, Percent_Identity=27.4881516587678, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI1789864, Length=247, Percent_Identity=28.3400809716599, Blast_Score=98, Evalue=8e-22, Organism=Escherichia coli, GI1788450, Length=216, Percent_Identity=27.7777777777778, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI87082268, Length=236, Percent_Identity=27.5423728813559, Blast_Score=93, Evalue=3e-20, Organism=Escherichia coli, GI87081709, Length=219, Percent_Identity=24.2009132420091, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1788225, Length=246, Percent_Identity=24.390243902439, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1790525, Length=221, Percent_Identity=25.3393665158371, Blast_Score=86, Evalue=4e-18, Organism=Escherichia coli, GI1788165, Length=221, Percent_Identity=28.5067873303167, Blast_Score=84, Evalue=9e-18, Organism=Escherichia coli, GI1787712, Length=230, Percent_Identity=25.6521739130435, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1787370, Length=213, Percent_Identity=23.943661971831, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1789991, Length=217, Percent_Identity=26.2672811059908, Blast_Score=83, Evalue=3e-17, Organism=Escherichia coli, GI48995001, Length=219, Percent_Identity=28.7671232876712, Blast_Score=82, Evalue=6e-17, Organism=Escherichia coli, GI1786563, Length=206, Percent_Identity=25.2427184466019, Blast_Score=81, Evalue=8e-17, Organism=Escherichia coli, GI1788897, Length=212, Percent_Identity=26.8867924528302, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1788472, Length=220, Percent_Identity=25.4545454545455, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1789672, Length=235, Percent_Identity=22.9787234042553, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI1789032, Length=224, Percent_Identity=22.3214285714286, Blast_Score=78, Evalue=8e-16, Organism=Escherichia coli, GI1790190, Length=223, Percent_Identity=25.5605381165919, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1788761, Length=213, Percent_Identity=26.7605633802817, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1790467, Length=210, Percent_Identity=23.8095238095238, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1789586, Length=229, Percent_Identity=25.764192139738, Blast_Score=76, Evalue=4e-15, Organism=Escherichia coli, GI1787500, Length=221, Percent_Identity=24.4343891402715, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1790739, Length=248, Percent_Identity=22.1774193548387, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1787792, Length=219, Percent_Identity=23.7442922374429, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI48994997, Length=213, Percent_Identity=28.169014084507, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI1786975, Length=210, Percent_Identity=29.5238095238095, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI48994883, Length=240, Percent_Identity=26.6666666666667, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1789891, Length=205, Percent_Identity=26.3414634146341, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1786345, Length=229, Percent_Identity=25.764192139738, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI87081791, Length=218, Percent_Identity=22.4770642201835, Blast_Score=71, Evalue=7e-14, Organism=Escherichia coli, GI1786803, Length=242, Percent_Identity=25.2066115702479, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI145693107, Length=210, Percent_Identity=27.6190476190476, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI87082267, Length=244, Percent_Identity=22.1311475409836, Blast_Score=69, Evalue=6e-13, Organism=Escherichia coli, GI1788506, Length=251, Percent_Identity=25.4980079681275, Blast_Score=68, Evalue=8e-13, Organism=Escherichia coli, GI1790162, Length=222, Percent_Identity=27.027027027027, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI1789873, Length=220, Percent_Identity=23.6363636363636, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI2367384, Length=237, Percent_Identity=24.8945147679325, Blast_Score=63, Evalue=3e-11, Organism=Escherichia coli, GI1786398, Length=210, Percent_Identity=22.3809523809524, Blast_Score=62, Evalue=4e-11, Organism=Escherichia coli, GI1787164, Length=214, Percent_Identity=22.4299065420561, Blast_Score=62, Evalue=5e-11, Organism=Escherichia coli, GI1789751, Length=161, Percent_Identity=27.3291925465839, Blast_Score=62, Evalue=5e-11, Organism=Escherichia coli, GI1787029, Length=220, Percent_Identity=21.3636363636364, Blast_Score=62, Evalue=7e-11, Organism=Caenorhabditis elegans, GI115533608, Length=304, Percent_Identity=28.6184210526316, Blast_Score=115, Evalue=3e-26, Organism=Caenorhabditis elegans, GI17565586, Length=220, Percent_Identity=27.7272727272727, Blast_Score=107, Evalue=9e-24, Organism=Caenorhabditis elegans, GI71983523, Length=330, Percent_Identity=27.5757575757576, Blast_Score=101, Evalue=6e-22, Organism=Caenorhabditis elegans, GI71983516, Length=330, Percent_Identity=27.5757575757576, Blast_Score=100, Evalue=7e-22, Organism=Caenorhabditis elegans, GI71983510, Length=330, Percent_Identity=27.5757575757576, Blast_Score=100, Evalue=7e-22, Organism=Caenorhabditis elegans, GI17510237, Length=226, Percent_Identity=29.2035398230088, Blast_Score=95, Evalue=4e-20, Organism=Caenorhabditis elegans, GI17533971, Length=198, Percent_Identity=28.2828282828283, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17558664, Length=230, Percent_Identity=25.2173913043478, Blast_Score=70, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71992290, Length=192, Percent_Identity=27.6041666666667, Blast_Score=69, Evalue=2e-12, Organism=Caenorhabditis elegans, GI86563255, Length=214, Percent_Identity=26.6355140186916, Blast_Score=67, Evalue=8e-12, Organism=Caenorhabditis elegans, GI193211017, Length=229, Percent_Identity=23.1441048034935, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI25146777, Length=227, Percent_Identity=22.0264317180617, Blast_Score=66, Evalue=2e-11, Organism=Caenorhabditis elegans, GI193211015, Length=229, Percent_Identity=23.1441048034935, Blast_Score=66, Evalue=3e-11, Organism=Caenorhabditis elegans, GI71996809, Length=229, Percent_Identity=22.2707423580786, Blast_Score=66, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17569145, Length=221, Percent_Identity=22.6244343891403, Blast_Score=65, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17539902, Length=220, Percent_Identity=25.4545454545455, Blast_Score=65, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6323217, Length=218, Percent_Identity=25.6880733944954, Blast_Score=72, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6319856, Length=292, Percent_Identity=23.2876712328767, Blast_Score=63, Evalue=7e-11, Organism=Drosophila melanogaster, GI116007328, Length=273, Percent_Identity=28.9377289377289, Blast_Score=122, Evalue=4e-28, Organism=Drosophila melanogaster, GI28574150, Length=273, Percent_Identity=28.9377289377289, Blast_Score=122, Evalue=4e-28, Organism=Drosophila melanogaster, GI24643674, Length=224, Percent_Identity=28.125, Blast_Score=107, Evalue=1e-23, Organism=Drosophila melanogaster, GI24666092, Length=320, Percent_Identity=26.5625, Blast_Score=104, Evalue=9e-23, Organism=Drosophila melanogaster, GI24582014, Length=213, Percent_Identity=28.6384976525822, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI24582012, Length=213, Percent_Identity=28.6384976525822, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI24650855, Length=178, Percent_Identity=31.4606741573034, Blast_Score=96, Evalue=3e-20, Organism=Drosophila melanogaster, GI24650853, Length=198, Percent_Identity=30.3030303030303, Blast_Score=96, Evalue=3e-20, Organism=Drosophila melanogaster, GI281362751, Length=198, Percent_Identity=30.3030303030303, Blast_Score=96, Evalue=3e-20, Organism=Drosophila melanogaster, GI221512771, Length=229, Percent_Identity=27.5109170305677, Blast_Score=96, Evalue=4e-20, Organism=Drosophila melanogaster, GI85725262, Length=235, Percent_Identity=27.2340425531915, Blast_Score=96, Evalue=5e-20, Organism=Drosophila melanogaster, GI28573571, Length=220, Percent_Identity=26.3636363636364, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI116007184, Length=209, Percent_Identity=27.2727272727273, Blast_Score=92, Evalue=4e-19, Organism=Drosophila melanogaster, GI28573573, Length=213, Percent_Identity=27.2300469483568, Blast_Score=92, Evalue=4e-19, Organism=Drosophila melanogaster, GI221500365, Length=209, Percent_Identity=27.2727272727273, Blast_Score=92, Evalue=4e-19, Organism=Drosophila melanogaster, GI24648314, Length=218, Percent_Identity=24.3119266055046, Blast_Score=91, Evalue=7e-19, Organism=Drosophila melanogaster, GI28571209, Length=213, Percent_Identity=24.8826291079812, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI221500419, Length=221, Percent_Identity=23.5294117647059, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI28574744, Length=207, Percent_Identity=25.6038647342995, Blast_Score=65, Evalue=4e-11,
Paralogues:
None
Copy number: 120 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 34810; Mature: 34679
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLKIDKVRKNFGDKIAVDNLNMVVKPGEVMGLIGQNGAGKTTTFRMILNFISADQGRIT CCEEHHHHHHCCCCEEEECCCCEEEECCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEE WQDGPINQEIKQKIGFLPEERGLYQKMTVEDQILYFAELHGMKRADARLKLQDWMKRLEV ECCCCCCHHHHHHHCCCCCCCCCHHHHCHHHHHHHHHHHCCCHHHHHEECHHHHHHHHHH VGKPMDKVQTLSKGNAQKIQFIATLIHEPEFLILDEPFTGLDPVNTELLRNEIKRSRDKG HCCCHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCC SAVIFSNHNMSDVELLSDHLLMLKGGQTILNGTVEDIRASYGRTRVYLESDLSNDELSLI CEEEEECCCCCHHHHHHHCEEEEECCCHHCCCCHHHHHHHCCCEEEEEECCCCCCHHHHH SGVESIEKRGSGRSIKISEANVGREIFQKVAKDGYVQAFVQSPPSLDEIFRMEVAEHDQE HHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCEEHHHCCCCCHHHHHHHHHHHCCHH DLSAKSGVAK HHHHHCCCCC >Mature Secondary Structure TLKIDKVRKNFGDKIAVDNLNMVVKPGEVMGLIGQNGAGKTTTFRMILNFISADQGRIT CEEHHHHHHCCCCEEEECCCCEEEECCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEE WQDGPINQEIKQKIGFLPEERGLYQKMTVEDQILYFAELHGMKRADARLKLQDWMKRLEV ECCCCCCHHHHHHHCCCCCCCCCHHHHCHHHHHHHHHHHCCCHHHHHEECHHHHHHHHHH VGKPMDKVQTLSKGNAQKIQFIATLIHEPEFLILDEPFTGLDPVNTELLRNEIKRSRDKG HCCCHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCC SAVIFSNHNMSDVELLSDHLLMLKGGQTILNGTVEDIRASYGRTRVYLESDLSNDELSLI CEEEEECCCCCHHHHHHHCEEEEECCCHHCCCCHHHHHHHCCCEEEEEECCCCCCHHHHH SGVESIEKRGSGRSIKISEANVGREIFQKVAKDGYVQAFVQSPPSLDEIFRMEVAEHDQE HHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCCCEEHHHCCCCCHHHHHHHHHHHCCHH DLSAKSGVAK HHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377 [H]