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The map label for this gene is yrjE [H]

Identifier: 125624700

GI number: 125624700

Start: 1898680

End: 1899393

Strand: Reverse

Name: yrjE [H]

Synonym: llmg_1918

Alternate gene names: 125624700

Gene position: 1899393-1898680 (Counterclockwise)

Preceding gene: 125624701

Following gene: 125624695

Centisome position: 75.09

GC content: 35.99

Gene sequence:

>714_bases
ATGAAAAATATGAATGACAATGATGTTATCTTTGACCAACGAAGCGACGGATTGAATGCATTTTTTAGTAAGATTTATGC
ATTGATGGGAGCAGGAGTCTTAGTTTCTGCATTAGTTTCTTGGATCATGATTACATTTTTCTTAGATAACATGAGAGCAA
TTCTCCAAAGTGGAAGTTTATTCTTACTTGTACTCTGGATTATTCCATTAGTGATGGTGGTATCACTTCAAGGTTTAGCA
ATGAAAAACTCAAAAATGGCATTACCGATTTTTATCGGATATGCAGCATTTATGGGATTCTTGATTAGCTTCACTCTTTT
GATGTATACCGCAACTGATATTACCTTAGCTTTTATTACAGCATCAGCAATGTTCTTTGGTTTATCTGTTTATGGACGAT
TTACTAAACGTAATTTATCTGGTATGGGTAAAGCTTTAGGAGTCGCAGTTTGGGGCTTGATTGTCGCAATGTTGCTTAAT
CTTTTCTTTGCTAGTACTGGACTTACAATCCTTATTAGCCTAGTAGGTGTTGTGATTTTCTCAGGTTTGATTGCTTGGGA
TAATCAAAAAATTACACAAGTTTATAATGCACACAATGGACAAGTGAGTGATGGTTGGGCAATTTCAATGGCACTTTCAC
TTTACCTTGATTTTATCAACATGTTCCTCTTCCTGCTCCGTCTTTTCGGTATCGCAGGTGGAAATCGCGATTAA

Upstream 100 bases:

>100_bases
AAATAATAGAAATAAAAAATCAGACCTAAGACTGATGACAAAAAGAGAAAATTTTGATAAAATAGTCTTAGAATTAAATT
AAAAAGGGAGGCCAAATATA

Downstream 100 bases:

>100_bases
AAATAAAAATTACTGACAAAAATTCTGTCAGTAAAAATAATAATAAAAGCTCTGCTATCAGCAGAGCTTTTTTATTTTAT
ACATCCTTAACAATCACATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MKNMNDNDVIFDQRSDGLNAFFSKIYALMGAGVLVSALVSWIMITFFLDNMRAILQSGSLFLLVLWIIPLVMVVSLQGLA
MKNSKMALPIFIGYAAFMGFLISFTLLMYTATDITLAFITASAMFFGLSVYGRFTKRNLSGMGKALGVAVWGLIVAMLLN
LFFASTGLTILISLVGVVIFSGLIAWDNQKITQVYNAHNGQVSDGWAISMALSLYLDFINMFLFLLRLFGIAGGNRD

Sequences:

>Translated_237_residues
MKNMNDNDVIFDQRSDGLNAFFSKIYALMGAGVLVSALVSWIMITFFLDNMRAILQSGSLFLLVLWIIPLVMVVSLQGLA
MKNSKMALPIFIGYAAFMGFLISFTLLMYTATDITLAFITASAMFFGLSVYGRFTKRNLSGMGKALGVAVWGLIVAMLLN
LFFASTGLTILISLVGVVIFSGLIAWDNQKITQVYNAHNGQVSDGWAISMALSLYLDFINMFLFLLRLFGIAGGNRD
>Mature_237_residues
MKNMNDNDVIFDQRSDGLNAFFSKIYALMGAGVLVSALVSWIMITFFLDNMRAILQSGSLFLLVLWIIPLVMVVSLQGLA
MKNSKMALPIFIGYAAFMGFLISFTLLMYTATDITLAFITASAMFFGLSVYGRFTKRNLSGMGKALGVAVWGLIVAMLLN
LFFASTGLTILISLVGVVIFSGLIAWDNQKITQVYNAHNGQVSDGWAISMALSLYLDFINMFLFLLRLFGIAGGNRD

Specific function: Unknown

COG id: COG0670

COG function: function code R; Integral membrane protein, interacts with FtsH

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BI1 family [H]

Homologues:

Organism=Homo sapiens, GI116812579, Length=208, Percent_Identity=26.4423076923077, Blast_Score=70, Evalue=2e-12,
Organism=Escherichia coli, GI1787004, Length=237, Percent_Identity=33.3333333333333, Blast_Score=119, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006214 [H]

Pfam domain/function: PF01027 UPF0005 [H]

EC number: NA

Molecular weight: Translated: 26032; Mature: 26032

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.3 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.3 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNMNDNDVIFDQRSDGLNAFFSKIYALMGAGVLVSALVSWIMITFFLDNMRAILQSGSL
CCCCCCCCEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
FLLVLWIIPLVMVVSLQGLAMKNSKMALPIFIGYAAFMGFLISFTLLMYTATDITLAFIT
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASAMFFGLSVYGRFTKRNLSGMGKALGVAVWGLIVAMLLNLFFASTGLTILISLVGVVIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SGLIAWDNQKITQVYNAHNGQVSDGWAISMALSLYLDFINMFLFLLRLFGIAGGNRD
HHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKNMNDNDVIFDQRSDGLNAFFSKIYALMGAGVLVSALVSWIMITFFLDNMRAILQSGSL
CCCCCCCCEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
FLLVLWIIPLVMVVSLQGLAMKNSKMALPIFIGYAAFMGFLISFTLLMYTATDITLAFIT
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASAMFFGLSVYGRFTKRNLSGMGKALGVAVWGLIVAMLLNLFFASTGLTILISLVGVVIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SGLIAWDNQKITQVYNAHNGQVSDGWAISMALSLYLDFINMFLFLLRLFGIAGGNRD
HHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]