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The map label for this gene is tadA [H]

Identifier: 125624632

GI number: 125624632

Start: 1824296

End: 1824763

Strand: Reverse

Name: tadA [H]

Synonym: llmg_1843

Alternate gene names: 125624632

Gene position: 1824763-1824296 (Counterclockwise)

Preceding gene: 125624633

Following gene: 125624630

Centisome position: 72.14

GC content: 41.24

Gene sequence:

>468_bases
ATGAATTTTACAGAAGAAGAAAAAGAATTTTTTATGACGGAAGCACTCAAAGAGGCGCAAAAAGCAGCTGAAAATGAGGA
AGTTCCAATTGGGGTTGTCATTGTCAAAGACGGCGAAATTATTGCGCGTGATTTCAATAGGCGAGAGCTTGATGGTCGAG
CAACGCACCATGCTGAAGTTTGTGCAATTGAAGCAGCAAATCAGGCAGTGGGAAATTGGCGACTTCTTGATTGTGCGCTC
TTTGTTACTATTGAACCTTGCGTCATGTGCGCCGGAGCGATTGGTTTAGCAAGGATTCCACAAGTTTACTTTGGGGCGAC
AAATCCTAAATTTGGAGGAACAGTCAGTCTCTATCAGATTTTAGAAGACAAGCGACTGAACCATCGAGTCCAAGTAGAAT
CGGGGATTTTAGAATACGAGAGTGCAAAAATTATGCAAGACTTCTTTAAAAATAGACGAAAAAAATAA

Upstream 100 bases:

>100_bases
TATTTGTTTAGATAATACGATTGTCAATGGAACATTAGAACAGTTTGAAGCAGTTCCAGTGAAAATATATTGTCTTGAAC
AAGAGAAATTTTTAGGATAA

Downstream 100 bases:

>100_bases
ATTGTGTTATAATAGTTTTCGGAGCAATAAGTTTCTTACGAAGCGTGTCAGGACCTGACGGTAGCAGCACTAAGTATGGA
ACTTATGTGCTCTTTTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MNFTEEEKEFFMTEALKEAQKAAENEEVPIGVVIVKDGEIIARDFNRRELDGRATHHAEVCAIEAANQAVGNWRLLDCAL
FVTIEPCVMCAGAIGLARIPQVYFGATNPKFGGTVSLYQILEDKRLNHRVQVESGILEYESAKIMQDFFKNRRKK

Sequences:

>Translated_155_residues
MNFTEEEKEFFMTEALKEAQKAAENEEVPIGVVIVKDGEIIARDFNRRELDGRATHHAEVCAIEAANQAVGNWRLLDCAL
FVTIEPCVMCAGAIGLARIPQVYFGATNPKFGGTVSLYQILEDKRLNHRVQVESGILEYESAKIMQDFFKNRRKK
>Mature_155_residues
MNFTEEEKEFFMTEALKEAQKAAENEEVPIGVVIVKDGEIIARDFNRRELDGRATHHAEVCAIEAANQAVGNWRLLDCAL
FVTIEPCVMCAGAIGLARIPQVYFGATNPKFGGTVSLYQILEDKRLNHRVQVESGILEYESAKIMQDFFKNRRKK

Specific function: Deaminates adenosine-34 to inosine in tRNA-Arg2 [H]

COG id: COG0590

COG function: function code FJ; Cytosine/adenosine deaminases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytidine and deoxycytidylate deaminase family [H]

Homologues:

Organism=Homo sapiens, GI124107608, Length=161, Percent_Identity=32.9192546583851, Blast_Score=86, Evalue=9e-18,
Organism=Escherichia coli, GI145693172, Length=155, Percent_Identity=40.6451612903226, Blast_Score=127, Evalue=3e-31,
Organism=Caenorhabditis elegans, GI17541138, Length=143, Percent_Identity=34.2657342657343, Blast_Score=86, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17554608, Length=99, Percent_Identity=40.4040404040404, Blast_Score=75, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6322425, Length=151, Percent_Identity=28.476821192053, Blast_Score=65, Evalue=4e-12,
Organism=Drosophila melanogaster, GI21355527, Length=149, Percent_Identity=32.8859060402685, Blast_Score=84, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016192
- InterPro:   IPR002125
- InterPro:   IPR016193 [H]

Pfam domain/function: PF00383 dCMP_cyt_deam_1 [H]

EC number: NA

Molecular weight: Translated: 17508; Mature: 17508

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: PS00903 CYT_DCMP_DEAMINASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFTEEEKEFFMTEALKEAQKAAENEEVPIGVVIVKDGEIIARDFNRRELDGRATHHAEV
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEECCCCCCCCCCCCCCCHHH
CAIEAANQAVGNWRLLDCALFVTIEPCVMCAGAIGLARIPQVYFGATNPKFGGTVSLYQI
EEEEHHHHCCCCEEEEEEEEEEHHHHHHHHHHHHHHHHCCHHEECCCCCCCCCHHHHHHH
LEDKRLNHRVQVESGILEYESAKIMQDFFKNRRKK
HHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNFTEEEKEFFMTEALKEAQKAAENEEVPIGVVIVKDGEIIARDFNRRELDGRATHHAEV
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEECCCCCCCCCCCCCCCHHH
CAIEAANQAVGNWRLLDCALFVTIEPCVMCAGAIGLARIPQVYFGATNPKFGGTVSLYQI
EEEEHHHHCCCCEEEEEEEEEEHHHHHHHHHHHHHHHHCCHHEECCCCCCCCCHHHHHHH
LEDKRLNHRVQVESGILEYESAKIMQDFFKNRRKK
HHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11296296 [H]