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The map label for this gene is ytmP [H]

Identifier: 125624601

GI number: 125624601

Start: 1792647

End: 1793420

Strand: Reverse

Name: ytmP [H]

Synonym: llmg_1812

Alternate gene names: 125624601

Gene position: 1793420-1792647 (Counterclockwise)

Preceding gene: 125624602

Following gene: 125624600

Centisome position: 70.9

GC content: 36.56

Gene sequence:

>774_bases
ATGATGAAAGCTGATTGGGATATGACGCCTGTAAAAGGCGGCTCAGGCAATGCATTTTTTGGGAAAAGTGATGAAGAACG
CGTTTTTATTAAAAAAAATGGTAGTCCTTTTTTGCCAAGCATTTATCTGGAAGGAATCACACCGAAAGTCTTATGGACAA
AACGGACGGCTGAAGGAGACACCTTATCTGCTCAACCTTGGATTGATGGTCATACGCTAAGTCCTGAGGATATGGAAGAC
CGTCAGATTAATCATATTTTAGCACATTTGCATGACTCAAAAAAACTAGTTGAATCTTATAAAAAATTGGGAAGTCAAAT
TGTTTTGCCTGAACAATTATTAGAGGATTGTGTCAGAAATACTGAAGCCTTACAAACAAACCATTTTCTCTCAGGAATTA
TTGAAGAAATGCGCAAGGAAATTCCTGAAATCAAAAATGAAGAGGTCGTGGTTGTTCATGGAGATGTCAATCACAAAAAC
TGGCTAGTGGATGATAATTCAGGAAAAATTTATCTTGTAGATTGGGATACGGTCTTTTTATCAGATTCCATGGTTGATAT
GGCACATGTTTTATCACACTATATCAAACCAACTAACTGGTCTTTATGGCTGATGACTTCTGGTGTGAGACCACGTTCTG
ACATTATGGAAAAAGTGGCTTGGTATGGGAAACTTTCTTTTCTTCGGCAAATTTCTGAATATCTTTCTAGAGGAAAAATG
AAAGAAGTAAACCAAGAAATCTTGGGACTTCGTAAATTTTGTGAATTATTTTAG

Upstream 100 bases:

>100_bases
AAACTATTCTAATTCACTATCCAAACGCTTAATTTTTGGATATAAAGTAGATGTATCAAAAAATGATTAATAGAATTTTA
AAGGAAAGGAGGAGATAAGG

Downstream 100 bases:

>100_bases
TAAAAATAGGCTAGGGTTTGGACCTTCCTATTTTTTGGCTTATAATTGAATAATCAAAATCAACAAACAAAAGGAAAGTC
AGATTCACTGATTTTCCAAT

Product: putative kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MMKADWDMTPVKGGSGNAFFGKSDEERVFIKKNGSPFLPSIYLEGITPKVLWTKRTAEGDTLSAQPWIDGHTLSPEDMED
RQINHILAHLHDSKKLVESYKKLGSQIVLPEQLLEDCVRNTEALQTNHFLSGIIEEMRKEIPEIKNEEVVVVHGDVNHKN
WLVDDNSGKIYLVDWDTVFLSDSMVDMAHVLSHYIKPTNWSLWLMTSGVRPRSDIMEKVAWYGKLSFLRQISEYLSRGKM
KEVNQEILGLRKFCELF

Sequences:

>Translated_257_residues
MMKADWDMTPVKGGSGNAFFGKSDEERVFIKKNGSPFLPSIYLEGITPKVLWTKRTAEGDTLSAQPWIDGHTLSPEDMED
RQINHILAHLHDSKKLVESYKKLGSQIVLPEQLLEDCVRNTEALQTNHFLSGIIEEMRKEIPEIKNEEVVVVHGDVNHKN
WLVDDNSGKIYLVDWDTVFLSDSMVDMAHVLSHYIKPTNWSLWLMTSGVRPRSDIMEKVAWYGKLSFLRQISEYLSRGKM
KEVNQEILGLRKFCELF
>Mature_257_residues
MMKADWDMTPVKGGSGNAFFGKSDEERVFIKKNGSPFLPSIYLEGITPKVLWTKRTAEGDTLSAQPWIDGHTLSPEDMED
RQINHILAHLHDSKKLVESYKKLGSQIVLPEQLLEDCVRNTEALQTNHFLSGIIEEMRKEIPEIKNEEVVVVHGDVNHKN
WLVDDNSGKIYLVDWDTVFLSDSMVDMAHVLSHYIKPTNWSLWLMTSGVRPRSDIMEKVAWYGKLSFLRQISEYLSRGKM
KEVNQEILGLRKFCELF

Specific function: Unknown

COG id: COG0510

COG function: function code M; Predicted choline kinase involved in LPS biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aminoglycoside phosphotransferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002575
- InterPro:   IPR011009 [H]

Pfam domain/function: PF01636 APH [H]

EC number: NA

Molecular weight: Translated: 29580; Mature: 29580

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKADWDMTPVKGGSGNAFFGKSDEERVFIKKNGSPFLPSIYLEGITPKVLWTKRTAEGD
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHEECCCCCEEEEEEECCCCC
TLSAQPWIDGHTLSPEDMEDRQINHILAHLHDSKKLVESYKKLGSQIVLPEQLLEDCVRN
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECHHHHHHHHHHH
TEALQTNHFLSGIIEEMRKEIPEIKNEEVVVVHGDVNHKNWLVDDNSGKIYLVDWDTVFL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEECCCCEEEEEECCEEEE
SDSMVDMAHVLSHYIKPTNWSLWLMTSGVRPRSDIMEKVAWYGKLSFLRQISEYLSRGKM
CHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
KEVNQEILGLRKFCELF
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMKADWDMTPVKGGSGNAFFGKSDEERVFIKKNGSPFLPSIYLEGITPKVLWTKRTAEGD
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHEECCCCCEEEEEEECCCCC
TLSAQPWIDGHTLSPEDMEDRQINHILAHLHDSKKLVESYKKLGSQIVLPEQLLEDCVRN
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECHHHHHHHHHHH
TEALQTNHFLSGIIEEMRKEIPEIKNEEVVVVHGDVNHKNWLVDDNSGKIYLVDWDTVFL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEECCCCEEEEEECCEEEE
SDSMVDMAHVLSHYIKPTNWSLWLMTSGVRPRSDIMEKVAWYGKLSFLRQISEYLSRGKM
CHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
KEVNQEILGLRKFCELF
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]