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The map label for this gene is srtC

Identifier: 125624590

GI number: 125624590

Start: 1778143

End: 1779432

Strand: Reverse

Name: srtC

Synonym: llmg_1801

Alternate gene names: NA

Gene position: 1779432-1778143 (Counterclockwise)

Preceding gene: 125624591

Following gene: 125624589

Centisome position: 70.35

GC content: 35.74

Gene sequence:

>1290_bases
ATGGCAAGAAAAAAACCAAAAACCTCCCGTAAAAAGGGCTTTAGTTTACGAAATATACTAAGTGTGATTTTGGCAATTAT
CGCAATCGGATTACTTTTTTATCCGATTGTGGTTAATTACCTAGCAGGACAACAAAACGTCAAATCAGTCCAAAAATATG
ATAATCAACTGTCCACAATTGGAAACTCGAAAGTTAAGCAACTGCTTGCGCAAGCACAATTATACAATGCACAGCTTTAC
AACGAATACATCTATGATGCAAGTCAGCATATTGCATGGAATAAACCTATTCCCAACTATAACAATGTTTTAAAAGTTGA
TTCTACAGGAATGATGGGCTTTATCACCATTCCGCAGATTAAGGTCAATGATATTCCAATCTATCATGGAGATTCTGAAA
CGATTTTAGGGCTTGGCGTTGGTCATGTGCCCCAATCTTCTTTACCAATCGGAGGAAATAATACTCACGCCGTTTTGCCT
GCACATTCTGGTCGAGTGAATGATACTTTATTTACTAATCTGGACAAACTTAAGAATGGGGACGTCTTTTATTTACACGT
CTTAGATTTAACTCTAAAATATAAGATTGATGATATTCGGATTGTTGTCCCAAATCAAGTTTCGTCATTGAGCATCGAAA
AAGGGCGAGATTTAGTGACTTTAGTTACTTGTTATCCGACAGGGATTAATAATAAAAGGTTATTGGTCACTGGCGAGCGT
GTTCCGATAGCTAAGGTATTACCCCAAGAAAAAGTCCAACGAAATCAGTTTGGTTATAATTTTTGGGTGATGCTTGGTTC
GGGTCTGTTACTGCTTTTGGGGCTTCTCTATCTTTTATGGTTACTCTTAGGCTCGAGACATAAGCTGTATCATGTTGCTG
ACAGAAAAATAGAAGAACCAAAGCTTTCAGATGGACAGTTAAGGGGAGAGTTTGGAGAAGGGTTTTATTTGACTGACTCC
AAGAAACTAGCTAATCAATGGTTAGATGAACAAGCTCATAAAAAAAATCAAAATCCTGATGAACTCCTTATAAATGTTTA
TCGCCTGAAAAAAATAAAAAATTTATCTCGTTGGATATTTAAAGATAAGACAGAAAACTGGCAAAATTATATTCTTGAAA
AACAAGGATATGGGGATGAAAAGCATTCTCTAGTTATGGGTCCTGTTTTTACCAGTGATAAGAAAGTCATGCAATATGCT
TTGAAAACAGAAGAAGCATTTGAGCATCTAAAGTATATTAAATGCTTGAATAAAAATAAATCAAAGAAAGGGGGAGGAAG
AATTGACTAA

Upstream 100 bases:

>100_bases
CCTTTGCCATCAAACGTCGTAAAGATAATGAAGAAGAAGTCGTAAAATAAGCTAGATTACCTTTGATAAAATGAAAATCT
AATTAGTAAGGAGGGGAATA

Downstream 100 bases:

>100_bases
AAGGATCAAATTAATGAGCATTTTAGCGTTTGCTTTGGTTTTGATTTTTGGATTTGTCAGTCAAAACGCTTTTGCTGATA
GCCGTTTAACAATTGTAAAA

Product: sortase SrtC

Products: NA

Alternate protein names: Sortase; Fimbrial Associated Sortase-Like Protein; Peptidase C; Sortase SrtB; Sortase-Like Protein; Sortase SrtC; Fimbrial Associated Sortase; Sortase Family Protein LPXTG-Site Transpeptidase; Sortase C Family; C-Type Sortase; Fimbria-Associated Protein; Fimbrial Associated Sortase Family Protein; Sortase C Type; Sortase C; SortaseC

Number of amino acids: Translated: 429; Mature: 428

Protein sequence:

>429_residues
MARKKPKTSRKKGFSLRNILSVILAIIAIGLLFYPIVVNYLAGQQNVKSVQKYDNQLSTIGNSKVKQLLAQAQLYNAQLY
NEYIYDASQHIAWNKPIPNYNNVLKVDSTGMMGFITIPQIKVNDIPIYHGDSETILGLGVGHVPQSSLPIGGNNTHAVLP
AHSGRVNDTLFTNLDKLKNGDVFYLHVLDLTLKYKIDDIRIVVPNQVSSLSIEKGRDLVTLVTCYPTGINNKRLLVTGER
VPIAKVLPQEKVQRNQFGYNFWVMLGSGLLLLLGLLYLLWLLLGSRHKLYHVADRKIEEPKLSDGQLRGEFGEGFYLTDS
KKLANQWLDEQAHKKNQNPDELLINVYRLKKIKNLSRWIFKDKTENWQNYILEKQGYGDEKHSLVMGPVFTSDKKVMQYA
LKTEEAFEHLKYIKCLNKNKSKKGGGRID

Sequences:

>Translated_429_residues
MARKKPKTSRKKGFSLRNILSVILAIIAIGLLFYPIVVNYLAGQQNVKSVQKYDNQLSTIGNSKVKQLLAQAQLYNAQLY
NEYIYDASQHIAWNKPIPNYNNVLKVDSTGMMGFITIPQIKVNDIPIYHGDSETILGLGVGHVPQSSLPIGGNNTHAVLP
AHSGRVNDTLFTNLDKLKNGDVFYLHVLDLTLKYKIDDIRIVVPNQVSSLSIEKGRDLVTLVTCYPTGINNKRLLVTGER
VPIAKVLPQEKVQRNQFGYNFWVMLGSGLLLLLGLLYLLWLLLGSRHKLYHVADRKIEEPKLSDGQLRGEFGEGFYLTDS
KKLANQWLDEQAHKKNQNPDELLINVYRLKKIKNLSRWIFKDKTENWQNYILEKQGYGDEKHSLVMGPVFTSDKKVMQYA
LKTEEAFEHLKYIKCLNKNKSKKGGGRID
>Mature_428_residues
ARKKPKTSRKKGFSLRNILSVILAIIAIGLLFYPIVVNYLAGQQNVKSVQKYDNQLSTIGNSKVKQLLAQAQLYNAQLYN
EYIYDASQHIAWNKPIPNYNNVLKVDSTGMMGFITIPQIKVNDIPIYHGDSETILGLGVGHVPQSSLPIGGNNTHAVLPA
HSGRVNDTLFTNLDKLKNGDVFYLHVLDLTLKYKIDDIRIVVPNQVSSLSIEKGRDLVTLVTCYPTGINNKRLLVTGERV
PIAKVLPQEKVQRNQFGYNFWVMLGSGLLLLLGLLYLLWLLLGSRHKLYHVADRKIEEPKLSDGQLRGEFGEGFYLTDSK
KLANQWLDEQAHKKNQNPDELLINVYRLKKIKNLSRWIFKDKTENWQNYILEKQGYGDEKHSLVMGPVFTSDKKVMQYAL
KTEEAFEHLKYIKCLNKNKSKKGGGRID

Specific function: Unknown

COG id: COG3764

COG function: function code M; Sortase (surface protein transpeptidase)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48781; Mature: 48650

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARKKPKTSRKKGFSLRNILSVILAIIAIGLLFYPIVVNYLAGQQNVKSVQKYDNQLSTI
CCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC
GNSKVKQLLAQAQLYNAQLYNEYIYDASQHIAWNKPIPNYNNVLKVDSTGMMGFITIPQI
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCEEEECCCCCEEEEEECEE
KVNDIPIYHGDSETILGLGVGHVPQSSLPIGGNNTHAVLPAHSGRVNDTLFTNLDKLKNG
EECCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCC
DVFYLHVLDLTLKYKIDDIRIVVPNQVSSLSIEKGRDLVTLVTCYPTGINNKRLLVTGER
CEEEEEEEEEEEEEEECEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEECCC
VPIAKVLPQEKVQRNQFGYNFWVMLGSGLLLLLGLLYLLWLLLGSRHKLYHVADRKIEEP
CCHHHHCCHHHHHHHHCCCEEEHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEHHCCCCCC
KLSDGQLRGEFGEGFYLTDSKKLANQWLDEQAHKKNQNPDELLINVYRLKKIKNLSRWIF
CCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
KDKTENWQNYILEKQGYGDEKHSLVMGPVFTSDKKVMQYALKTEEAFEHLKYIKCLNKNK
CCCCCCHHHHHHHCCCCCCCCCCEEECCEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
SKKGGGRID
CCCCCCCCC
>Mature Secondary Structure 
ARKKPKTSRKKGFSLRNILSVILAIIAIGLLFYPIVVNYLAGQQNVKSVQKYDNQLSTI
CCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC
GNSKVKQLLAQAQLYNAQLYNEYIYDASQHIAWNKPIPNYNNVLKVDSTGMMGFITIPQI
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCEEEECCCCCEEEEEECEE
KVNDIPIYHGDSETILGLGVGHVPQSSLPIGGNNTHAVLPAHSGRVNDTLFTNLDKLKNG
EECCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCC
DVFYLHVLDLTLKYKIDDIRIVVPNQVSSLSIEKGRDLVTLVTCYPTGINNKRLLVTGER
CEEEEEEEEEEEEEEECEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEECCC
VPIAKVLPQEKVQRNQFGYNFWVMLGSGLLLLLGLLYLLWLLLGSRHKLYHVADRKIEEP
CCHHHHCCHHHHHHHHCCCEEEHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEHHCCCCCC
KLSDGQLRGEFGEGFYLTDSKKLANQWLDEQAHKKNQNPDELLINVYRLKKIKNLSRWIF
CCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
KDKTENWQNYILEKQGYGDEKHSLVMGPVFTSDKKVMQYALKTEEAFEHLKYIKCLNKNK
CCCCCCHHHHHHHCCCCCCCCCCEEECCEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
SKKGGGRID
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA