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The map label for this gene is ylxR [H]

Identifier: 125624584

GI number: 125624584

Start: 1773678

End: 1774004

Strand: Reverse

Name: ylxR [H]

Synonym: llmg_1794

Alternate gene names: 125624584

Gene position: 1774004-1773678 (Counterclockwise)

Preceding gene: 125624585

Following gene: 125624583

Centisome position: 70.13

GC content: 36.7

Gene sequence:

>327_bases
ATGAAACAGAAAAAAATTCCAATGAGAAAATCTTTAGTTTCAAATGAGCAATTTCCCAAACGGGATTTATTGCGTATTGC
CTACAACAAAGAGGGAGAAATTTCAATTGACCCTTCTGGCAAGGCACATGGGCGCGGAGCTTATATTGCAATTCTTAATA
AAGAAGCAAAAGAAGCTAAGAAAAAACGCGTATTTGACCGAGCTTTTCAAACTAAAATCGCTGATGAGTTTTATGATGAA
TTAATCACTTATGTTGAACACCTTGTTGCTCGACGTGAACTTGAATCGACAACTTATTCTGCTGATTTAGCGCCGGATTA
TGACTAA

Upstream 100 bases:

>100_bases
GAATTTCTTTTTAATAAGTCTGTCAGTAAAATGACTGAGAGTTTAGGAATCAAAAAATGGCTGTCAGTCACTTTTTCAAC
AGAAATTTTGAGGATTTTCG

Downstream 100 bases:

>100_bases
AGATGGATAAAAAACAACAGATTTCAAATTTGCTAGGTATTGCAAAACGTGCGGGTAAAATTATTAGTGGAGAAGAATTG
GTGATTAAGTCAATTCAATC

Product: hypothetical protein

Products: NA

Alternate protein names: ORF3 [H]

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MKQKKIPMRKSLVSNEQFPKRDLLRIAYNKEGEISIDPSGKAHGRGAYIAILNKEAKEAKKKRVFDRAFQTKIADEFYDE
LITYVEHLVARRELESTTYSADLAPDYD

Sequences:

>Translated_108_residues
MKQKKIPMRKSLVSNEQFPKRDLLRIAYNKEGEISIDPSGKAHGRGAYIAILNKEAKEAKKKRVFDRAFQTKIADEFYDE
LITYVEHLVARRELESTTYSADLAPDYD
>Mature_108_residues
MKQKKIPMRKSLVSNEQFPKRDLLRIAYNKEGEISIDPSGKAHGRGAYIAILNKEAKEAKKKRVFDRAFQTKIADEFYDE
LITYVEHLVARRELESTTYSADLAPDYD

Specific function: Unknown

COG id: COG2740

COG function: function code K; Predicted nucleic-acid-binding protein implicated in transcription termination

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007393 [H]

Pfam domain/function: PF04296 DUF448 [H]

EC number: NA

Molecular weight: Translated: 12509; Mature: 12509

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQKKIPMRKSLVSNEQFPKRDLLRIAYNKEGEISIDPSGKAHGRGAYIAILNKEAKEAK
CCCCCCCHHHHHHCCCCCCHHHHHHHHCCCCCCEEECCCCCCCCCCEEEEEECCHHHHHH
KKRVFDRAFQTKIADEFYDELITYVEHLVARRELESTTYSADLAPDYD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKQKKIPMRKSLVSNEQFPKRDLLRIAYNKEGEISIDPSGKAHGRGAYIAILNKEAKEAK
CCCCCCCHHHHHHCCCCCCHHHHHHHHCCCCCCEEECCCCCCCCCCEEEEEECCHHHHHH
KKRVFDRAFQTKIADEFYDELITYVEHLVARRELESTTYSADLAPDYD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8491709; 9384377 [H]