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The map label for this gene is ltrE

Identifier: 125624191

GI number: 125624191

Start: 1348769

End: 1349419

Strand: Reverse

Name: ltrE

Synonym: llmg_1374

Alternate gene names: NA

Gene position: 1349419-1348769 (Counterclockwise)

Preceding gene: 125624192

Following gene: 125624190

Centisome position: 53.35

GC content: 31.49

Gene sequence:

>651_bases
GTGGAAACGACTACGGAAGTTTGTCCTAGATGTCATTCTAGACTGACACTCAGGGAAGGAAAATATGGTAAATTTTGGGG
CTGCAAAAATTTCCCCAAATGCGTAGGAACTCTTCCTTATGATAGATATATGAGTGAACAAGAACTAGCTGACTACTTTG
CGAACCGAAGTAAACCTCAGCAAATAAAAATTGAGAAGTTTGTTAATATTGTTAGTGGTTATTGTATCTGTCCGCATTGT
AATGAGCGTACTCTAGTAACTGGTTTGGGATTACGTTTTGATGAGTGTAAATTTTCGAATAACACAAATTTAAAAGACTG
GGGTTATGATGTTTTATTTATAAGTTGGTCGGCTATATTACCAGAAAAAGAAAGAATAGAAAAACAAATACTGAATAGAT
ATAGTACCGTTCGAAAATATGGGAAAAAGAAAAATTATTATGGGCATATATGTGATCATTGTCATCAAAAAATTAATAAT
AAATATGTGTATGACGACTTAACAAATGTGACTCCCTTTGGAGTTCACAGTAAAGAAACTTTATATCTAGAGCGAATAAA
ACTTTATAAATCCATAAATATAAATATTAGAATTTGCGGGGATTTATCACCAACAACACAATTCTTAAAAAGAATTGAAT
ATATAAAATAG

Upstream 100 bases:

>100_bases
CCTGCCTGTCAGGGATGTTTGCTTTTTCTGTTATAATTGTATTAGGTTGAAGGAGGGGCGCAATGAGCTTGTTTACAATG
TTAAAAAAAAGAAACCAGAT

Downstream 100 bases:

>100_bases
GAAGATTATCATAATGATAGTCTTTTTTTGAGGATTTAAAATTTGAAAAATAAACAAAATTTAAAAAGACCAATTCAAAA
AATTATTAGATTTTCTAAAG

Product: LtrE protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
METTTEVCPRCHSRLTLREGKYGKFWGCKNFPKCVGTLPYDRYMSEQELADYFANRSKPQQIKIEKFVNIVSGYCICPHC
NERTLVTGLGLRFDECKFSNNTNLKDWGYDVLFISWSAILPEKERIEKQILNRYSTVRKYGKKKNYYGHICDHCHQKINN
KYVYDDLTNVTPFGVHSKETLYLERIKLYKSININIRICGDLSPTTQFLKRIEYIK

Sequences:

>Translated_216_residues
METTTEVCPRCHSRLTLREGKYGKFWGCKNFPKCVGTLPYDRYMSEQELADYFANRSKPQQIKIEKFVNIVSGYCICPHC
NERTLVTGLGLRFDECKFSNNTNLKDWGYDVLFISWSAILPEKERIEKQILNRYSTVRKYGKKKNYYGHICDHCHQKINN
KYVYDDLTNVTPFGVHSKETLYLERIKLYKSININIRICGDLSPTTQFLKRIEYIK
>Mature_216_residues
METTTEVCPRCHSRLTLREGKYGKFWGCKNFPKCVGTLPYDRYMSEQELADYFANRSKPQQIKIEKFVNIVSGYCICPHC
NERTLVTGLGLRFDECKFSNNTNLKDWGYDVLFISWSAILPEKERIEKQILNRYSTVRKYGKKKNYYGHICDHCHQKINN
KYVYDDLTNVTPFGVHSKETLYLERIKLYKSININIRICGDLSPTTQFLKRIEYIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25516; Mature: 25516

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.1 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
5.1 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METTTEVCPRCHSRLTLREGKYGKFWGCKNFPKCVGTLPYDRYMSEQELADYFANRSKPQ
CCCHHHHHHHHHHCEEECCCCCCCCCCCCCCHHHHCCCCHHHHCCHHHHHHHHHCCCCCC
QIKIEKFVNIVSGYCICPHCNERTLVTGLGLRFDECKFSNNTNLKDWGYDVLFISWSAIL
EEHHHHHHHHHHCCEECCCCCCCEEEEECCCEECCCCCCCCCCCCCCCCEEEEEEHHHHC
PEKERIEKQILNRYSTVRKYGKKKNYYGHICDHCHQKINNKYVYDDLTNVTPFGVHSKET
CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCHH
LYLERIKLYKSININIRICGDLSPTTQFLKRIEYIK
HHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHCCC
>Mature Secondary Structure
METTTEVCPRCHSRLTLREGKYGKFWGCKNFPKCVGTLPYDRYMSEQELADYFANRSKPQ
CCCHHHHHHHHHHCEEECCCCCCCCCCCCCCHHHHCCCCHHHHCCHHHHHHHHHCCCCCC
QIKIEKFVNIVSGYCICPHCNERTLVTGLGLRFDECKFSNNTNLKDWGYDVLFISWSAIL
EEHHHHHHHHHHCCEECCCCCCCEEEEECCCEECCCCCCCCCCCCCCCCEEEEEEHHHHC
PEKERIEKQILNRYSTVRKYGKKKNYYGHICDHCHQKINNKYVYDDLTNVTPFGVHSKET
CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCHH
LYLERIKLYKSININIRICGDLSPTTQFLKRIEYIK
HHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA