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The map label for this gene is potB [H]

Identifier: 125624147

GI number: 125624147

Start: 1303013

End: 1303801

Strand: Reverse

Name: potB [H]

Synonym: llmg_1327

Alternate gene names: 125624147

Gene position: 1303801-1303013 (Counterclockwise)

Preceding gene: 125624148

Following gene: 125624146

Centisome position: 51.54

GC content: 37.39

Gene sequence:

>789_bases
GTGACCAAAAGAATTTATTCCGTTCCCTATTTTCTCTGGATTGTCTTCTTTGTTATCGTTCCTTTGGCCATGCTTTTGTG
GCAATCATTTTTTGATTTAAACGGTCATTTTACCCTTAACAATTACATCCTCTATTTCTCTAGTGGAACTTATCTATTGA
TGACGTGGAATTCTATTCTCTACGCATTGATTATTACTGTGGCAACCCTTGTCATTTCCTACCCTGTGGCCTATGTTTTG
ACCAAACTAAAAATGAAACAATTTTGGCTCATGCTTATTATTTTACCGACCTGGGTCAACCTTTTGCTCAAAGCTTATGC
TTTTATCGGAATTTTTGGTAAATATGGTTCGGTCAATAACTTCTTACAGTTTTTGGGGATTGGACGGACACAGATTTTAT
TTACTGACCTAAGCTTTATTTTGGTCGCATCATATATCTCAATCCCCTTTATGGTTTTACCAATTTTTAATGCTTTAAAT
GATTTAGATGATAATTTGGTCAATGCAAGTAGAGATTTAGGTGCTTCAGCTTTCCAAACTTTTACCCAAGTCATCTGGCC
TCTTTCACTAAACGGTGTCAGAGCAGGAGTGCAAGCTGTTTTTATCCCAAGCTTGTCACTCTTTATGTTGACCCGTTTAA
TCGGTGGAAATAAAGTCATCACGCTTGGTACGGCTGTTGAAGAACATTTCTTAACTACCCAAAACTGGGGAATGGGTTCA
ACTATTGCCGTTGTATTGGTTGTAGCCATGTTGATTGTCATGAGAATGACCAAAGAAAGGAGAGATTAA

Upstream 100 bases:

>100_bases
TCGAAAATACAATGGAGCTGACAGAACTTGCTGAAACTGTTAATGAAATTTTGCAAAAGCAAGAAAATGAAACAGAAAAT
AGTGAAAGTGGGGATCATAA

Downstream 100 bases:

>100_bases
ATTGCAAAAAAAAAATTCACTTGGTAAAGTTTACATCACCTTTGTCCTCATTCTTTTATATGCTCCTATTTTTTACCTTA
TCTTTTACTCATTTAATGCT

Product: spermidine/putrescine ABC transporter permease

Products: phosphate; putrescine [Cytoplasm]; ADP; spermidine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MTKRIYSVPYFLWIVFFVIVPLAMLLWQSFFDLNGHFTLNNYILYFSSGTYLLMTWNSILYALIITVATLVISYPVAYVL
TKLKMKQFWLMLIILPTWVNLLLKAYAFIGIFGKYGSVNNFLQFLGIGRTQILFTDLSFILVASYISIPFMVLPIFNALN
DLDDNLVNASRDLGASAFQTFTQVIWPLSLNGVRAGVQAVFIPSLSLFMLTRLIGGNKVITLGTAVEEHFLTTQNWGMGS
TIAVVLVVAMLIVMRMTKERRD

Sequences:

>Translated_262_residues
MTKRIYSVPYFLWIVFFVIVPLAMLLWQSFFDLNGHFTLNNYILYFSSGTYLLMTWNSILYALIITVATLVISYPVAYVL
TKLKMKQFWLMLIILPTWVNLLLKAYAFIGIFGKYGSVNNFLQFLGIGRTQILFTDLSFILVASYISIPFMVLPIFNALN
DLDDNLVNASRDLGASAFQTFTQVIWPLSLNGVRAGVQAVFIPSLSLFMLTRLIGGNKVITLGTAVEEHFLTTQNWGMGS
TIAVVLVVAMLIVMRMTKERRD
>Mature_261_residues
TKRIYSVPYFLWIVFFVIVPLAMLLWQSFFDLNGHFTLNNYILYFSSGTYLLMTWNSILYALIITVATLVISYPVAYVLT
KLKMKQFWLMLIILPTWVNLLLKAYAFIGIFGKYGSVNNFLQFLGIGRTQILFTDLSFILVASYISIPFMVLPIFNALND
LDDNLVNASRDLGASAFQTFTQVIWPLSLNGVRAGVQAVFIPSLSLFMLTRLIGGNKVITLGTAVEEHFLTTQNWGMGST
IAVVLVVAMLIVMRMTKERRD

Specific function: Required for the activity of the bacterial periplasmic transport system of putrescine and spermidine [H]

COG id: COG1176

COG function: function code E; ABC-type spermidine/putrescine transport system, permease component I

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787369, Length=248, Percent_Identity=35.8870967741936, Blast_Score=148, Evalue=3e-37,
Organism=Escherichia coli, GI1787080, Length=237, Percent_Identity=34.5991561181435, Blast_Score=131, Evalue=4e-32,
Organism=Escherichia coli, GI1787713, Length=214, Percent_Identity=31.7757009345794, Blast_Score=99, Evalue=4e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29721; Mature: 29590

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TKRIYSVPYFLWIVFFVIVPLAMLLWQSFFDLNGHFTLNNYILYFSSGTYLLMTWNSIL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCEEEEEHHHHH
YALIITVATLVISYPVAYVLTKLKMKQFWLMLIILPTWVNLLLKAYAFIGIFGKYGSVNN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
FLQFLGIGRTQILFTDLSFILVASYISIPFMVLPIFNALNDLDDNLVNASRDLGASAFQT
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
FTQVIWPLSLNGVRAGVQAVFIPSLSLFMLTRLIGGNKVITLGTAVEEHFLTTQNWGMGS
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHCCCCCCCCCH
TIAVVLVVAMLIVMRMTKERRD
HHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: putrescine [Periplasm]; H2O; ATP; spermidine [Periplasm] [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] ATP + spermidine [Periplasm] + H2O = ADP + phosphate + spermidine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]