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The map label for this gene is hdiR

Identifier: 125624033

GI number: 125624033

Start: 1172575

End: 1173333

Strand: Direct

Name: hdiR

Synonym: llmg_1204

Alternate gene names: NA

Gene position: 1172575-1173333 (Clockwise)

Preceding gene: 125624032

Following gene: 125624034

Centisome position: 46.36

GC content: 34.52

Gene sequence:

>759_bases
ATGAATTTTGGTCAGAATTTAAAAAAACTCAGAAAAGAAGCTAAACTTACGCAAAGTCAATTAGCAGATAAACTAGGAAT
GAAACAAAATGCTTACGTCCTTTGGGAGCAAAAGGCAACTAACCCAACTTTAGAATTATTAGAAAAGCTAGCAGATATAT
ATGATTTACCCATTCAAGAATTAATCAAAAATCCTGATAATGGTGCAGAAAAACAATTAATTGATAATTATCGTTCGCTG
ACAGGAGAACAACAGGAATCTGTCATTAATTTCACTGATTTTCTTATAGAACAGAATAAAGCAGATCTCATTGATTTGAA
AACTTATAGACGTTCTTCATTACAGTATGCTGTTGTTGAAGACGAAGCACTTTCAGCAGGTTTTGGTCAAACAGCTAATA
ATACAGGCGGACATTATAGAGCATATACAACAGAAAATCTTGGACGATATGATGGAGCTGCCAGAGTTAAAGGTGAATCC
ATGGAACCAGATTTTCCAAATTTTTCTATTGCAACATTCTTACACACAGGTTTTGGACGGAGTGGAGATGTCTATGCCAT
TGCTGAAGGAGATTTGGGAGAAGAACGCTTATATATTAAACAAGTATTTGAAGAAGAAGACGGAAATTTCCGAATTCATT
CACTCAATCCAGACCCACAATACAAGGACTTTTATCTAGGACAGGAAGATAATTTCCGGATTATTGGGCCAGTGGTTGAT
AATTTTGAAGAGATTGAAGAATCACAAATTATAGATTAA

Upstream 100 bases:

>100_bases
TTTATTTTTTTATCAGTTTATCTGATAAAAAGATTGACAAAAAATGAAATAAGAGATATAATATAAGAAAGTTTGATAAA
GTGATGAAAAAGGAGAAGTT

Downstream 100 bases:

>100_bases
ATGAGGGCTTAAAATGAATTGGATAAGAGAAATTATGCCAATACTGGGGATTGGATTAATCTTTGCAGTTGTTTATGAAC
TTGTCCTATTGCTTTCACAA

Product: HTH-type transcriptional regulator HdiR

Products: NA

Alternate protein names: Phage Transcriptional Repressor; Phage Repressor-Like Protein; XRE Family Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator Cro/CI Family; HTH-Type Transcriptional Regulator HdiR; Transcriptional Repressor

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MNFGQNLKKLRKEAKLTQSQLADKLGMKQNAYVLWEQKATNPTLELLEKLADIYDLPIQELIKNPDNGAEKQLIDNYRSL
TGEQQESVINFTDFLIEQNKADLIDLKTYRRSSLQYAVVEDEALSAGFGQTANNTGGHYRAYTTENLGRYDGAARVKGES
MEPDFPNFSIATFLHTGFGRSGDVYAIAEGDLGEERLYIKQVFEEEDGNFRIHSLNPDPQYKDFYLGQEDNFRIIGPVVD
NFEEIEESQIID

Sequences:

>Translated_252_residues
MNFGQNLKKLRKEAKLTQSQLADKLGMKQNAYVLWEQKATNPTLELLEKLADIYDLPIQELIKNPDNGAEKQLIDNYRSL
TGEQQESVINFTDFLIEQNKADLIDLKTYRRSSLQYAVVEDEALSAGFGQTANNTGGHYRAYTTENLGRYDGAARVKGES
MEPDFPNFSIATFLHTGFGRSGDVYAIAEGDLGEERLYIKQVFEEEDGNFRIHSLNPDPQYKDFYLGQEDNFRIIGPVVD
NFEEIEESQIID
>Mature_252_residues
MNFGQNLKKLRKEAKLTQSQLADKLGMKQNAYVLWEQKATNPTLELLEKLADIYDLPIQELIKNPDNGAEKQLIDNYRSL
TGEQQESVINFTDFLIEQNKADLIDLKTYRRSSLQYAVVEDEALSAGFGQTANNTGGHYRAYTTENLGRYDGAARVKGES
MEPDFPNFSIATFLHTGFGRSGDVYAIAEGDLGEERLYIKQVFEEEDGNFRIHSLNPDPQYKDFYLGQEDNFRIIGPVVD
NFEEIEESQIID

Specific function: Unknown

COG id: COG2932

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28698; Mature: 28698

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFGQNLKKLRKEAKLTQSQLADKLGMKQNAYVLWEQKATNPTLELLEKLADIYDLPIQE
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCHHH
LIKNPDNGAEKQLIDNYRSLTGEQQESVINFTDFLIEQNKADLIDLKTYRRSSLQYAVVE
HHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHCCCEEEEEC
DEALSAGFGQTANNTGGHYRAYTTENLGRYDGAARVKGESMEPDFPNFSIATFLHTGFGR
CHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHCCCC
SGDVYAIAEGDLGEERLYIKQVFEEEDGNFRIHSLNPDPQYKDFYLGQEDNFRIIGPVVD
CCCEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEECCCCCCCEEECHHHC
NFEEIEESQIID
CHHHHHHHHCCC
>Mature Secondary Structure
MNFGQNLKKLRKEAKLTQSQLADKLGMKQNAYVLWEQKATNPTLELLEKLADIYDLPIQE
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCHHH
LIKNPDNGAEKQLIDNYRSLTGEQQESVINFTDFLIEQNKADLIDLKTYRRSSLQYAVVE
HHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHCCCEEEEEC
DEALSAGFGQTANNTGGHYRAYTTENLGRYDGAARVKGESMEPDFPNFSIATFLHTGFGR
CHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHCCCC
SGDVYAIAEGDLGEERLYIKQVFEEEDGNFRIHSLNPDPQYKDFYLGQEDNFRIIGPVVD
CCCEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEECCCCCCCEEECHHHC
NFEEIEESQIID
CHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA