Click here to switch to the map view.

The map label for this gene is fbpA [H]

Identifier: 125623956

GI number: 125623956

Start: 1086608

End: 1088230

Strand: Reverse

Name: fbpA [H]

Synonym: llmg_1125

Alternate gene names: 125623956

Gene position: 1088230-1086608 (Counterclockwise)

Preceding gene: 125623966

Following gene: 125623955

Centisome position: 43.02

GC content: 35.86

Gene sequence:

>1623_bases
ATGTCCTTTGATGGTATTTTTTTACACCACATGACGGCTGAATTGCAACCGCTTGTTGGTGGACGTATTCAAAAAATTAA
TCAACCTTTTGACCAAGAACTTGTTTTAACAATTCGGTCAGCTGGTAAATCTCATAAACTTCTACTTTCAGCGCACCCTG
TATTTGGACGGGTCCAACTGACGAAAACCGATTTTCAAAATCCTCAAAACCCCAATAACTTTGTAATGATTTTACGGAAA
TATTTAGCGGGGGCTTTTCTTGAAAAAATCGAACAAGTTGAAAATGACCGCCAAATTATTTTTCACATTTCAACTAAAGA
TGAGATTGGTGACAGCCTAAAAATTGCTTTAATCGCTGAAATTATGGGGAAACACAGCAATATTATTTTGCTTGAAAAAA
CCTCACAAAAAATCATTGAATCAATCAAACATATTGGCTTTTCGCAAAATCAATATCGGACGATTTTGCCTGGCTCAACC
TATATCGCACCACCTGCTTCTAATGCTACTGACCCCTTTAAAGCAACTGATGAAGAAATTTTTGATGCGTTACAAACTGA
ACAATTACAACAAAAATTCCAAGGGATTGGGCGCGATTCTAAAATCGCATTGACTGGTCTGTCAGTAAAAGAATTCAAAG
AAAAATTACTGACAGTTAAGCCATCAATTTATCCTACTGATAATTTTTCTAGTATTCAACTTACTGATGATTTTGTAAGC
TTCGATAGCTTATCTGAAATGCTGGATGTTTATTATGCTGACAAAGCTGAACGTGACCGTGTCAAACAAGTTGCTGCTTC
TGTCATTAAAAAAATCCAAAATGAATTAAAGAAAAATCGTGATAAATTAAAGAAACAAGAACGAGAATTATTGGCTACTG
ACAATGCTGAAATTTTCCGTCAAAAAGGTGAGTTGCTTAACACTTTCTTAAATCAAGTCCCAAACGATAAAACAAGTGTG
ACCTTAGAAAATTACTATACAAACGAACCCTTAGACATCGCTTTAAACCCCGCACTAAGCCCCGCTCAAAATGCTCAACG
CTATTTCCACCGTTATCAAAAATTGAAACAAGCTGTCAAATTTTTGGGAGAACAAATCACCAAAACTAAAGAAACAATTC
ATTATTTAGAGTCCGTTGAGTCCAATCTTGAAAATGCTGATGTTCCTGAAATTGCTGATATTCGTGAAGAATTAATTCAA
ACTGGCTATATCAAACAAAAATATCGCAATAAGAAACAAAAAATGCTGCCGCCAGAAAAATATCAAGCTGAAGATGGAAC
AATTATTTTGGTCGGAAAAAATAATTTACAAAATGAACAAGTAAGTTTCAAACTTTCTCGTCGAGGCGATCTTTGGTTTC
ACGTTAAAGATATTCCAGGAAGTCATGTTTTGATTACTGGAAATCCAACCCCTTCTGACGAAACAATCACTTTCGCCGGA
GAATTAGCCGCCTATTTCAGTAAGGCCCGTTATTCAAATCTTGTTCAAGTAGACGTTTTGGATGTCAAAAAATTACACAA
GCCGACCGGAACAGCTCCAGGATTTGTGACCTATGATCGTGAAAAAACGATTCGTGTCACTCCTGATGAAGCTGTCATTA
AATCACGTAAAATCAGTAAGTAA

Upstream 100 bases:

>100_bases
ATTTTACTGACAGGCCTTTGTCAGTAAATTGAAAAATAAAAGGCTCCTAAATAAACAGTGAAAGCTGTTTTTATAATCTA
TAAAACGAAAGAGGCACATA

Downstream 100 bases:

>100_bases
AGTTTACTGACGAAAATTAATTTTAAAAATTTGGAGAATCCATGTCTGAAATTATAAAATGTCCTGTTTGCAATCATTTA
CTTACAAAAGAAGGAAATAC

Product: putative fibronectin-binding protein-like protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 540; Mature: 539

Protein sequence:

>540_residues
MSFDGIFLHHMTAELQPLVGGRIQKINQPFDQELVLTIRSAGKSHKLLLSAHPVFGRVQLTKTDFQNPQNPNNFVMILRK
YLAGAFLEKIEQVENDRQIIFHISTKDEIGDSLKIALIAEIMGKHSNIILLEKTSQKIIESIKHIGFSQNQYRTILPGST
YIAPPASNATDPFKATDEEIFDALQTEQLQQKFQGIGRDSKIALTGLSVKEFKEKLLTVKPSIYPTDNFSSIQLTDDFVS
FDSLSEMLDVYYADKAERDRVKQVAASVIKKIQNELKKNRDKLKKQERELLATDNAEIFRQKGELLNTFLNQVPNDKTSV
TLENYYTNEPLDIALNPALSPAQNAQRYFHRYQKLKQAVKFLGEQITKTKETIHYLESVESNLENADVPEIADIREELIQ
TGYIKQKYRNKKQKMLPPEKYQAEDGTIILVGKNNLQNEQVSFKLSRRGDLWFHVKDIPGSHVLITGNPTPSDETITFAG
ELAAYFSKARYSNLVQVDVLDVKKLHKPTGTAPGFVTYDREKTIRVTPDEAVIKSRKISK

Sequences:

>Translated_540_residues
MSFDGIFLHHMTAELQPLVGGRIQKINQPFDQELVLTIRSAGKSHKLLLSAHPVFGRVQLTKTDFQNPQNPNNFVMILRK
YLAGAFLEKIEQVENDRQIIFHISTKDEIGDSLKIALIAEIMGKHSNIILLEKTSQKIIESIKHIGFSQNQYRTILPGST
YIAPPASNATDPFKATDEEIFDALQTEQLQQKFQGIGRDSKIALTGLSVKEFKEKLLTVKPSIYPTDNFSSIQLTDDFVS
FDSLSEMLDVYYADKAERDRVKQVAASVIKKIQNELKKNRDKLKKQERELLATDNAEIFRQKGELLNTFLNQVPNDKTSV
TLENYYTNEPLDIALNPALSPAQNAQRYFHRYQKLKQAVKFLGEQITKTKETIHYLESVESNLENADVPEIADIREELIQ
TGYIKQKYRNKKQKMLPPEKYQAEDGTIILVGKNNLQNEQVSFKLSRRGDLWFHVKDIPGSHVLITGNPTPSDETITFAG
ELAAYFSKARYSNLVQVDVLDVKKLHKPTGTAPGFVTYDREKTIRVTPDEAVIKSRKISK
>Mature_539_residues
SFDGIFLHHMTAELQPLVGGRIQKINQPFDQELVLTIRSAGKSHKLLLSAHPVFGRVQLTKTDFQNPQNPNNFVMILRKY
LAGAFLEKIEQVENDRQIIFHISTKDEIGDSLKIALIAEIMGKHSNIILLEKTSQKIIESIKHIGFSQNQYRTILPGSTY
IAPPASNATDPFKATDEEIFDALQTEQLQQKFQGIGRDSKIALTGLSVKEFKEKLLTVKPSIYPTDNFSSIQLTDDFVSF
DSLSEMLDVYYADKAERDRVKQVAASVIKKIQNELKKNRDKLKKQERELLATDNAEIFRQKGELLNTFLNQVPNDKTSVT
LENYYTNEPLDIALNPALSPAQNAQRYFHRYQKLKQAVKFLGEQITKTKETIHYLESVESNLENADVPEIADIREELIQT
GYIKQKYRNKKQKMLPPEKYQAEDGTIILVGKNNLQNEQVSFKLSRRGDLWFHVKDIPGSHVLITGNPTPSDETITFAGE
LAAYFSKARYSNLVQVDVLDVKKLHKPTGTAPGFVTYDREKTIRVTPDEAVIKSRKISK

Specific function: Unknown

COG id: COG1293

COG function: function code K; Predicted RNA-binding protein homologous to eukaryotic snRNP

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SDCCAG1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008532
- InterPro:   IPR008616 [H]

Pfam domain/function: PF05670 DUF814; PF05833 FbpA [H]

EC number: NA

Molecular weight: Translated: 61441; Mature: 61310

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFDGIFLHHMTAELQPLVGGRIQKINQPFDQELVLTIRSAGKSHKLLLSAHPVFGRVQL
CCCCCEEHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHCCCCCEEEEEECCCEEEEEE
TKTDFQNPQNPNNFVMILRKYLAGAFLEKIEQVENDRQIIFHISTKDEIGDSLKIALIAE
EHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHCCCHHHHHHHHH
IMGKHSNIILLEKTSQKIIESIKHIGFSQNQYRTILPGSTYIAPPASNATDPFKATDEEI
HHCCCCCEEEEECCHHHHHHHHHHCCCCCCCCEEECCCCCEECCCCCCCCCCCCCCHHHH
FDALQTEQLQQKFQGIGRDSKIALTGLSVKEFKEKLLTVKPSIYPTDNFSSIQLTDDFVS
HHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHEECCCCCCCCCCCEEEEEHHHHH
FDSLSEMLDVYYADKAERDRVKQVAASVIKKIQNELKKNRDKLKKQERELLATDNAEIFR
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
QKGELLNTFLNQVPNDKTSVTLENYYTNEPLDIALNPALSPAQNAQRYFHRYQKLKQAVK
HHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHH
FLGEQITKTKETIHYLESVESNLENADVPEIADIREELIQTGYIKQKYRNKKQKMLPPEK
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
YQAEDGTIILVGKNNLQNEQVSFKLSRRGDLWFHVKDIPGSHVLITGNPTPSDETITFAG
CCCCCCEEEEEECCCCCCCEEEEEEECCCCEEEEEEECCCCEEEEECCCCCCCCEEEEHH
ELAAYFSKARYSNLVQVDVLDVKKLHKPTGTAPGFVTYDREKTIRVTPDEAVIKSRKISK
HHHHHHHHHHHCCEEEEEEHHHHHHCCCCCCCCCEEEECCCCEEEECCHHHHHHHCCCCC
>Mature Secondary Structure 
SFDGIFLHHMTAELQPLVGGRIQKINQPFDQELVLTIRSAGKSHKLLLSAHPVFGRVQL
CCCCEEHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHCCCCCEEEEEECCCEEEEEE
TKTDFQNPQNPNNFVMILRKYLAGAFLEKIEQVENDRQIIFHISTKDEIGDSLKIALIAE
EHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHCCCHHHHHHHHH
IMGKHSNIILLEKTSQKIIESIKHIGFSQNQYRTILPGSTYIAPPASNATDPFKATDEEI
HHCCCCCEEEEECCHHHHHHHHHHCCCCCCCCEEECCCCCEECCCCCCCCCCCCCCHHHH
FDALQTEQLQQKFQGIGRDSKIALTGLSVKEFKEKLLTVKPSIYPTDNFSSIQLTDDFVS
HHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHEECCCCCCCCCCCEEEEEHHHHH
FDSLSEMLDVYYADKAERDRVKQVAASVIKKIQNELKKNRDKLKKQERELLATDNAEIFR
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
QKGELLNTFLNQVPNDKTSVTLENYYTNEPLDIALNPALSPAQNAQRYFHRYQKLKQAVK
HHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHH
FLGEQITKTKETIHYLESVESNLENADVPEIADIREELIQTGYIKQKYRNKKQKMLPPEK
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
YQAEDGTIILVGKNNLQNEQVSFKLSRRGDLWFHVKDIPGSHVLITGNPTPSDETITFAG
CCCCCCEEEEEECCCCCCCEEEEEEECCCCEEEEEEECCCCEEEEECCCCCCCCEEEEHH
ELAAYFSKARYSNLVQVDVLDVKKLHKPTGTAPGFVTYDREKTIRVTPDEAVIKSRKISK
HHHHHHHHHHHCCEEEEEEHHHHHHCCCCCCCCCEEEECCCCEEEECCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 9534248 [H]