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The map label for this gene is 125623900

Identifier: 125623900

GI number: 125623900

Start: 1028621

End: 1028956

Strand: Direct

Name: 125623900

Synonym: llmg_1069

Alternate gene names: NA

Gene position: 1028621-1028956 (Clockwise)

Preceding gene: 125623896

Following gene: 125623901

Centisome position: 40.67

GC content: 33.04

Gene sequence:

>336_bases
ATGGAAATCGAAAAAACCAATCGAATGAATACGCTTTTTGAGTTTTATGCGACACTTTTAACTGACAAGCAAATGAACTA
CATTGAACTTTATTATGCTGACGATTACAGTTTGGCTGAAATAGCAGAAGAATTTAATATCAGCCGTCAAGCAGTTTATG
ATAATATTAAACGGACCGAAAAAGTGCTCGAAAGCTACGAAGAAAAATTGCATCTTTTTAGTAATTATGTGGTGCGTAAT
CAATTGCTTGAAGAACTGATGAAAAAGTATCCTTCTGACCAATACTTAATCAGTAAACTTCAGGAAATACAGCAGATTGA
TGAAGAAGAATTTTAG

Upstream 100 bases:

>100_bases
AGAAACGAGTTAAAAAAATTACATTTTTAAAAACTTAAATGATAAGTTAAAACTAAGAATAAAACTAAAAAATCACTTAA
TTTCTGCTATAATAGACATT

Downstream 100 bases:

>100_bases
TAGTTAGAGATAATGAATTTACTGACAGAAATGCTAAAATATGCTATAATTAAACTTCAAGGTTCATAAAAGTTACTGAC
AGACTGCCAGTAAGAATTCC

Product: putative DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MEIEKTNRMNTLFEFYATLLTDKQMNYIELYYADDYSLAEIAEEFNISRQAVYDNIKRTEKVLESYEEKLHLFSNYVVRN
QLLEELMKKYPSDQYLISKLQEIQQIDEEEF

Sequences:

>Translated_111_residues
MEIEKTNRMNTLFEFYATLLTDKQMNYIELYYADDYSLAEIAEEFNISRQAVYDNIKRTEKVLESYEEKLHLFSNYVVRN
QLLEELMKKYPSDQYLISKLQEIQQIDEEEF
>Mature_111_residues
MEIEKTNRMNTLFEFYATLLTDKQMNYIELYYADDYSLAEIAEEFNISRQAVYDNIKRTEKVLESYEEKLHLFSNYVVRN
QLLEELMKKYPSDQYLISKLQEIQQIDEEEF

Specific function: Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein

COG id: COG2739

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0122 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1069_LACLM (A2RK52)

Other databases:

- EMBL:   AM406671
- RefSeq:   YP_001032383.1
- ProteinModelPortal:   A2RK52
- SMR:   A2RK52
- STRING:   A2RK52
- GeneID:   4796668
- GenomeReviews:   AM406671_GR
- KEGG:   llm:llmg_1069
- eggNOG:   COG2739
- HOGENOM:   HBG427419
- OMA:   KSYMSLY
- ProtClustDB:   PRK00118
- HAMAP:   MF_00245
- InterPro:   IPR013324
- InterPro:   IPR007394
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10

Pfam domain/function: PF04297 UPF0122; SSF88659 Sigma_r3_r4

EC number: NA

Molecular weight: Translated: 13532; Mature: 13532

Theoretical pI: Translated: 4.18; Mature: 4.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIEKTNRMNTLFEFYATLLTDKQMNYIELYYADDYSLAEIAEEFNISRQAVYDNIKRTE
CCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHCCHHHHHHHHHHHHH
KVLESYEEKLHLFSNYVVRNQLLEELMKKYPSDQYLISKLQEIQQIDEEEF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MEIEKTNRMNTLFEFYATLLTDKQMNYIELYYADDYSLAEIAEEFNISRQAVYDNIKRTE
CCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHCCHHHHHHHHHHHHH
KVLESYEEKLHLFSNYVVRNQLLEELMKKYPSDQYLISKLQEIQQIDEEEF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA