| Definition | Lactococcus lactis subsp. cremoris MG1363, complete genome. |
|---|---|
| Accession | NC_009004 |
| Length | 2,529,478 |
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The map label for this gene is tnp982
Identifier: 125623516
GI number: 125623516
Start: 649642
End: 650532
Strand: Reverse
Name: tnp982
Synonym: llmg_0656
Alternate gene names: NA
Gene position: 650532-649642 (Counterclockwise)
Preceding gene: 125623522
Following gene: 125623515
Centisome position: 25.72
GC content: 38.38
Gene sequence:
>891_bases ATGACTTATAATAGCACACTTACAAAAGTTTTTGTTTATTTACTGATAAGCATTGAAGCGATTTATCAAACAAGCGTTCC ACTCGAAATACAAAATCGGAAGAACGTCCATCTCGCAACATCAGATTGCTTAGTTATCGCTTGTTACCTATGGGGGGTAC TGCATTTTAGTGAAACGCTTAAAGCTAAGCACCAACTTGCTCAAAGTTTATTTCCTAATTTCCTAGAATATTCTCGCTTT GTCCGCCGTTGTAATGCCCTCTTACCGAGTATCCAAGTCATTCGCCAAGCACTCGTCTTTAAAGAGGTTGAAGGAATTAG TGTATCCATTATTGACAGCTTCCCCATTCCTTTATGTCAGCCGATTCGTAACTTCAGAAGCAAAGTTCTTGGAGATTATG CAAATGTTGGCTACAATGCTACAAAGGGACAGTACTTCTATGGATGTAAATGTCATGCTTTAGTCAGTGAATCAGGCTAT GTCATAGACTACACAATTACTCCTGCTTCAATGGCTGATAGTTCAATGGCCAAGGAAGTATTGTCTCAATTTGGCACACC CATAGTCCTTGGAGATATGGGCTATTTAGGTCAAGTGCTTCATGACAGGCTTGAACTCAAAGAAATTGAACTGATTACAC CCGTCAGAATGAACATGAAGAAAAAGGACATAACTTTTCCTATTTTTTCAAAACGTCGAAAAGTCATTGAACGCGTATTC TCTTTTCTGACAAACCTCGGAGCTGAACGCTGTAAAAATCGTTCGCCTCAAGGTTTTCAATTGAAATTAGAGATGATACT TTTAGCGTATTCTTTACTGTTAAAATCAGCTAAATCACTGGAACCAGAGACTTTAAGATATTCTATCGGGTATCAAGTCA TGGCTAAATAA
Upstream 100 bases:
>100_bases ATATCTAGTATATCAGAATTCTAGTTGATTTCATTGAAAAATATATAAGTCGTGCTATCCTAATCTTAAACCACTAAGCA TTAGAAAGCGCACGACCTAT
Downstream 100 bases:
>100_bases TCAACTAGCAATTCGGGTGGAGCTATACTATAAAAGTGGACAGATAAACGTATGTTATAATCTGTTTAATAAACACTAAA AAGGAAATCTTTCTATGGCT
Product: transposase for insertion sequence element IS982B
Products: NA
Alternate protein names: Transposase IS4 Family Protein; ISPg3 Transposase; Transposase IS4 Family; IS4 Family Transposase; Transposase For Insertion Sequence Element; Transposase And Inactivated Derivatives IS5 Family; Transposase Family Protein; Transposase IS
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MTYNSTLTKVFVYLLISIEAIYQTSVPLEIQNRKNVHLATSDCLVIACYLWGVLHFSETLKAKHQLAQSLFPNFLEYSRF VRRCNALLPSIQVIRQALVFKEVEGISVSIIDSFPIPLCQPIRNFRSKVLGDYANVGYNATKGQYFYGCKCHALVSESGY VIDYTITPASMADSSMAKEVLSQFGTPIVLGDMGYLGQVLHDRLELKEIELITPVRMNMKKKDITFPIFSKRRKVIERVF SFLTNLGAERCKNRSPQGFQLKLEMILLAYSLLLKSAKSLEPETLRYSIGYQVMAK
Sequences:
>Translated_296_residues MTYNSTLTKVFVYLLISIEAIYQTSVPLEIQNRKNVHLATSDCLVIACYLWGVLHFSETLKAKHQLAQSLFPNFLEYSRF VRRCNALLPSIQVIRQALVFKEVEGISVSIIDSFPIPLCQPIRNFRSKVLGDYANVGYNATKGQYFYGCKCHALVSESGY VIDYTITPASMADSSMAKEVLSQFGTPIVLGDMGYLGQVLHDRLELKEIELITPVRMNMKKKDITFPIFSKRRKVIERVF SFLTNLGAERCKNRSPQGFQLKLEMILLAYSLLLKSAKSLEPETLRYSIGYQVMAK >Mature_295_residues TYNSTLTKVFVYLLISIEAIYQTSVPLEIQNRKNVHLATSDCLVIACYLWGVLHFSETLKAKHQLAQSLFPNFLEYSRFV RRCNALLPSIQVIRQALVFKEVEGISVSIIDSFPIPLCQPIRNFRSKVLGDYANVGYNATKGQYFYGCKCHALVSESGYV IDYTITPASMADSSMAKEVLSQFGTPIVLGDMGYLGQVLHDRLELKEIELITPVRMNMKKKDITFPIFSKRRKVIERVFS FLTNLGAERCKNRSPQGFQLKLEMILLAYSLLLKSAKSLEPETLRYSIGYQVMAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33640; Mature: 33509
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYNSTLTKVFVYLLISIEAIYQTSVPLEIQNRKNVHLATSDCLVIACYLWGVLHFSETL CCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEECHHHHHHHHHHHHHHHHHHHH KAKHQLAQSLFPNFLEYSRFVRRCNALLPSIQVIRQALVFKEVEGISVSIIDSFPIPLCQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHH PIRNFRSKVLGDYANVGYNATKGQYFYGCKCHALVSESGYVIDYTITPASMADSSMAKEV HHHHHHHHHHHHHHHCCCCCCCCCEEECEEEEEEECCCCEEEEEEECCHHHHHHHHHHHH LSQFGTPIVLGDMGYLGQVLHDRLELKEIELITPVRMNMKKKDITFPIFSKRRKVIERVF HHHCCCCEEEECHHHHHHHHHHHHHHHHHHEECCHHHCCCCCCCCCHHHHHHHHHHHHHH SFLTNLGAERCKNRSPQGFQLKLEMILLAYSLLLKSAKSLEPETLRYSIGYQVMAK HHHHHHCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHEEEECCEEEECC >Mature Secondary Structure TYNSTLTKVFVYLLISIEAIYQTSVPLEIQNRKNVHLATSDCLVIACYLWGVLHFSETL CCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEECHHHHHHHHHHHHHHHHHHHH KAKHQLAQSLFPNFLEYSRFVRRCNALLPSIQVIRQALVFKEVEGISVSIIDSFPIPLCQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHH PIRNFRSKVLGDYANVGYNATKGQYFYGCKCHALVSESGYVIDYTITPASMADSSMAKEV HHHHHHHHHHHHHHHCCCCCCCCCEEECEEEEEEECCCCEEEEEEECCHHHHHHHHHHHH LSQFGTPIVLGDMGYLGQVLHDRLELKEIELITPVRMNMKKKDITFPIFSKRRKVIERVF HHHCCCCEEEECHHHHHHHHHHHHHHHHHHEECCHHHCCCCCCCCCHHHHHHHHHHHHHH SFLTNLGAERCKNRSPQGFQLKLEMILLAYSLLLKSAKSLEPETLRYSIGYQVMAK HHHHHHCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHEEEECCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA