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The map label for this gene is ps201 [H]

Identifier: 125623455

GI number: 125623455

Start: 583444

End: 584460

Strand: Reverse

Name: ps201 [H]

Synonym: llmg_0594

Alternate gene names: 125623455

Gene position: 584460-583444 (Counterclockwise)

Preceding gene: 125623456

Following gene: 125623450

Centisome position: 23.11

GC content: 31.47

Gene sequence:

>1017_bases
TTGCTACAAAAAAATTCTCAAGTTGCTGCAAGTGATACCGAAATAAAACTTTCTAATGGTTTTAAAATCGGAGATGATAA
TATTTTACTATATAAATATTTCGACAATTACATTGAGGTATTTAAAAAAGATAAAATAACAACACGAACTTTCAATAAAT
ATCTCAATAGCTCTAAAGATTTAAAAAAATACTTTCCTAAAGAGACTTTGAAAAGTTTAACAAAGACAAGATATCAAAAG
TACTTGAATGGGTACACTAAAACACATGCTGACCACTCTGTTCGCCAATTTAACACCCATATAAGGGCAGCAGTTCAAAA
TGCCTTAGACGAACAAATAATAGCTACCGATTTTACAAAGAAAGCTGTAGTAAAAGGTCAAGGTGCTAAAAAGTCCGAAG
AAGAAAAATATATCAACTATGCTGACTTCGTGAGGTTATTAAGACTATCAAGCGAAAAAATCGACTCGTTTTATAGCACA
AGACTAATGATATATCTTGCTGGAACTACTGGTATGAGGTTCGGGGAACTAATAGGTCTTAAATGGAGTGAGGTTGATTT
TGAAAACGAAATAATCAATATTAAACTTGAGTATAATTATGTCACAAAAATATTCACAGAACCCAAAGGCTATAAAATTA
GGAAAATAACTATAAATTCAAAAACAGCCAAAATATTATTAGACTTAAAAGATAATCAAATAAATCATGAATTAGATAAT
CCAGACAATCTTGTGTTTTTCAATCCCACTTACGGAATCGTCTCAAATAATGCAGCGAATAGTGTACTACGCAGAATGCA
AAAAAATCTTGAGATTTATCCAACTATTACTATGCACGGATTAAGGCACACACACGGCTCAGTGCTTCTGATGAAAGGAA
TAAACATCTTGGCTGTATCAAAAAGACTTGGCCATGCAAGTGTAGATATAACGCTTGGTGTATATGCTCACTTACTTAAA
GAATTAGAAGACCGAGAAAACGATAAAATAAAAAGTGAACTTGATAAAATCATATAA

Upstream 100 bases:

>100_bases
CAACAATGGCAAGATATATCAACGTAGTAAAGTCTGGCAATACGAAATTTCAATAAAAGCCCCCTAACAGAAAAATATAA
AAAAATCCGAAAATCAGGTT

Downstream 100 bases:

>100_bases
TAGTTAAATATGGTTTGGCACATATTTGGCACAAAAACAACAAAAACCGCTCAACAGAGCGGTTTATTTGTATGATTAAA
TGCGTCCGGAGGGAATCGAA

Product: phage integrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MLQKNSQVAASDTEIKLSNGFKIGDDNILLYKYFDNYIEVFKKDKITTRTFNKYLNSSKDLKKYFPKETLKSLTKTRYQK
YLNGYTKTHADHSVRQFNTHIRAAVQNALDEQIIATDFTKKAVVKGQGAKKSEEEKYINYADFVRLLRLSSEKIDSFYST
RLMIYLAGTTGMRFGELIGLKWSEVDFENEIINIKLEYNYVTKIFTEPKGYKIRKITINSKTAKILLDLKDNQINHELDN
PDNLVFFNPTYGIVSNNAANSVLRRMQKNLEIYPTITMHGLRHTHGSVLLMKGINILAVSKRLGHASVDITLGVYAHLLK
ELEDRENDKIKSELDKII

Sequences:

>Translated_338_residues
MLQKNSQVAASDTEIKLSNGFKIGDDNILLYKYFDNYIEVFKKDKITTRTFNKYLNSSKDLKKYFPKETLKSLTKTRYQK
YLNGYTKTHADHSVRQFNTHIRAAVQNALDEQIIATDFTKKAVVKGQGAKKSEEEKYINYADFVRLLRLSSEKIDSFYST
RLMIYLAGTTGMRFGELIGLKWSEVDFENEIINIKLEYNYVTKIFTEPKGYKIRKITINSKTAKILLDLKDNQINHELDN
PDNLVFFNPTYGIVSNNAANSVLRRMQKNLEIYPTITMHGLRHTHGSVLLMKGINILAVSKRLGHASVDITLGVYAHLLK
ELEDRENDKIKSELDKII
>Mature_338_residues
MLQKNSQVAASDTEIKLSNGFKIGDDNILLYKYFDNYIEVFKKDKITTRTFNKYLNSSKDLKKYFPKETLKSLTKTRYQK
YLNGYTKTHADHSVRQFNTHIRAAVQNALDEQIIATDFTKKAVVKGQGAKKSEEEKYINYADFVRLLRLSSEKIDSFYST
RLMIYLAGTTGMRFGELIGLKWSEVDFENEIINIKLEYNYVTKIFTEPKGYKIRKITINSKTAKILLDLKDNQINHELDN
PDNLVFFNPTYGIVSNNAANSVLRRMQKNLEIYPTITMHGLRHTHGSVLLMKGINILAVSKRLGHASVDITLGVYAHLLK
ELEDRENDKIKSELDKII

Specific function: Putative integrase that is involved in the insertion of the integrative and conjugative element ICEBs1. Required for the excision of ICEBs1 from the donor cell genome and subsequent integration in the recipient cell genome. Appears not to be transferred t

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 39015; Mature: 39015

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQKNSQVAASDTEIKLSNGFKIGDDNILLYKYFDNYIEVFKKDKITTRTFNKYLNSSKD
CCCCCCCCCCCCCEEEECCCEEECCCCEEEEHHHHHHHHHHHCCCCHHHHHHHHHCCCHH
LKKYFPKETLKSLTKTRYQKYLNGYTKTHADHSVRQFNTHIRAAVQNALDEQIIATDFTK
HHHHCCHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
KAVVKGQGAKKSEEEKYINYADFVRLLRLSSEKIDSFYSTRLMIYLAGTTGMRFGELIGL
HHHHCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCHHHHHCC
KWSEVDFENEIINIKLEYNYVTKIFTEPKGYKIRKITINSKTAKILLDLKDNQINHELDN
EECCCCCCCCEEEEEEEEEEEEEEEECCCCCEEEEEEECCCEEEEEEEECCCCCCCCCCC
PDNLVFFNPTYGIVSNNAANSVLRRMQKNLEIYPTITMHGLRHTHGSVLLMKGINILAVS
CCCEEEECCCCCEEECCHHHHHHHHHHHCCEEEEEEEECCCCCCCCCEEEECCCCEEEEE
KRLGHASVDITLGVYAHLLKELEDRENDKIKSELDKII
HHCCCCEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHCC
>Mature Secondary Structure
MLQKNSQVAASDTEIKLSNGFKIGDDNILLYKYFDNYIEVFKKDKITTRTFNKYLNSSKD
CCCCCCCCCCCCCEEEECCCEEECCCCEEEEHHHHHHHHHHHCCCCHHHHHHHHHCCCHH
LKKYFPKETLKSLTKTRYQKYLNGYTKTHADHSVRQFNTHIRAAVQNALDEQIIATDFTK
HHHHCCHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
KAVVKGQGAKKSEEEKYINYADFVRLLRLSSEKIDSFYSTRLMIYLAGTTGMRFGELIGL
HHHHCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCCCCHHHHHCC
KWSEVDFENEIINIKLEYNYVTKIFTEPKGYKIRKITINSKTAKILLDLKDNQINHELDN
EECCCCCCCCEEEEEEEEEEEEEEEECCCCCEEEEEEECCCEEEEEEEECCCCCCCCCCC
PDNLVFFNPTYGIVSNNAANSVLRRMQKNLEIYPTITMHGLRHTHGSVLLMKGINILAVS
CCCEEEECCCCCEEECCHHHHHHHHHHHCCEEEEEEEECCCCCCCCCEEEECCCCEEEEE
KRLGHASVDITLGVYAHLLKELEDRENDKIKSELDKII
HHCCCCEEEEHHHHHHHHHHHHHCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]