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The map label for this gene is ybbK [C]

Identifier: 125623454

GI number: 125623454

Start: 582293

End: 583195

Strand: Direct

Name: ybbK [C]

Synonym: llmg_0593

Alternate gene names: 125623454

Gene position: 582293-583195 (Clockwise)

Preceding gene: 125623453

Following gene: 125623460

Centisome position: 23.02

GC content: 37.54

Gene sequence:

>903_bases
ATGGATATTATTATTTTTCCACTCGTTATTTTGGCAATTGTTTTACTAATTCTTATCTTTAGTTTAAGTACAATTGTCTT
CGTCGTGAAGCAACAAACGGTTGCTATTGTTGAGCGTTTTGGTAAATATCAATTTACTGCAAGCCCAGGTTTTCATTTAA
AACTACCATGGGGAATTGACCGAATTGCTGCGCGAATTCAATTACGCCTTTTGCAAACAGAGATGACTGTTGAAACAAAA
ACTGCAGATAACGTCTTTGTTACGATGAATATTGCTACACAATATCGAGTAAACGAACAATCAATTAAAGATGCTTACTA
CAAATTGATGAACCCAGGTGAACAAATCAAAGCCTATATCGAAGATGCACTTCGGTCAGCTGTGCCAAAATTGACTTTGG
ATGATGTCTTTGAGAAAAAAGATGAAATCGCTCTTGAAGTTCAAAAAACGGTTGCTGAAGAAATGCAAACTTACGGATAC
ATTATTGTTAAAACTTTGATTACTAAAGTTGAACCAGATGCTGAAGTTAAGCAATCTATGAACGAAATCAATGCGGCTCA
ACGTAAGCAAGATGCTAGTCAAATGTTGGCTAATGCTAATAAAATACAAGTTGTGACGGCAGCCGAAGCTGAAGCTGAGA
AAGACCGCTTGCATGGTGTTGGGATTGCCGAACAACGTAAAGCAATCGTTGATGGTTTGGCTCAACAAATTACTGAAATC
AAAAAACTTGGTGTGGCACTTGATGAAGAACAAATTATGGCGATTTTGCTGACCAACCAATATTTGGATACTTTGAACCA
ATTTGCTGCGGGTGGAAACTCAACTATCTTCCTTCCTAGTGGAGCTGAAGGAGCAGAAAGCTTGCGAACCCAGATTTTAT
CAGCAATAAAAGCAGGAAAATAA

Upstream 100 bases:

>100_bases
ACGGTTACTGATAAAGGCATAGTCATTAAAAAAACTAATTATTTAATTTTACTGACAGATTGATCAGCGACTGATGAGAG
GCTACAAGGAGGAACTTTTC

Downstream 100 bases:

>100_bases
AAAGAAAAAAGAAAGTTATCAAAAGATAGCTTTTTTTATTTTGCTGAGTTTCTTCTTGCAATTTTTTTTGAAATTAGGTA
GAATAAAGGGGTTGTAGCGT

Product: prohibitin/stomatin like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MDIIIFPLVILAIVLLILIFSLSTIVFVVKQQTVAIVERFGKYQFTASPGFHLKLPWGIDRIAARIQLRLLQTEMTVETK
TADNVFVTMNIATQYRVNEQSIKDAYYKLMNPGEQIKAYIEDALRSAVPKLTLDDVFEKKDEIALEVQKTVAEEMQTYGY
IIVKTLITKVEPDAEVKQSMNEINAAQRKQDASQMLANANKIQVVTAAEAEAEKDRLHGVGIAEQRKAIVDGLAQQITEI
KKLGVALDEEQIMAILLTNQYLDTLNQFAAGGNSTIFLPSGAEGAESLRTQILSAIKAGK

Sequences:

>Translated_300_residues
MDIIIFPLVILAIVLLILIFSLSTIVFVVKQQTVAIVERFGKYQFTASPGFHLKLPWGIDRIAARIQLRLLQTEMTVETK
TADNVFVTMNIATQYRVNEQSIKDAYYKLMNPGEQIKAYIEDALRSAVPKLTLDDVFEKKDEIALEVQKTVAEEMQTYGY
IIVKTLITKVEPDAEVKQSMNEINAAQRKQDASQMLANANKIQVVTAAEAEAEKDRLHGVGIAEQRKAIVDGLAQQITEI
KKLGVALDEEQIMAILLTNQYLDTLNQFAAGGNSTIFLPSGAEGAESLRTQILSAIKAGK
>Mature_300_residues
MDIIIFPLVILAIVLLILIFSLSTIVFVVKQQTVAIVERFGKYQFTASPGFHLKLPWGIDRIAARIQLRLLQTEMTVETK
TADNVFVTMNIATQYRVNEQSIKDAYYKLMNPGEQIKAYIEDALRSAVPKLTLDDVFEKKDEIALEVQKTVAEEMQTYGY
IIVKTLITKVEPDAEVKQSMNEINAAQRKQDASQMLANANKIQVVTAAEAEAEKDRLHGVGIAEQRKAIVDGLAQQITEI
KKLGVALDEEQIMAILLTNQYLDTLNQFAAGGNSTIFLPSGAEGAESLRTQILSAIKAGK

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the band 7/mec-2 family [H]

Homologues:

Organism=Escherichia coli, GI1786697, Length=280, Percent_Identity=24.6428571428571, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107
- InterPro:   IPR018080
- InterPro:   IPR001972 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 33287; Mature: 33287

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIIIFPLVILAIVLLILIFSLSTIVFVVKQQTVAIVERFGKYQFTASPGFHLKLPWGID
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCEEEECCCCHH
RIAARIQLRLLQTEMTVETKTADNVFVTMNIATQYRVNEQSIKDAYYKLMNPGEQIKAYI
HHHHHHHHHHHHHHHEEEEECCCCEEEEEEEEEEEECCHHHHHHHHHHHHCCHHHHHHHH
EDALRSAVPKLTLDDVFEKKDEIALEVQKTVAEEMQTYGYIIVKTLITKVEPDAEVKQSM
HHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
NEINAAQRKQDASQMLANANKIQVVTAAEAEAEKDRLHGVGIAEQRKAIVDGLAQQITEI
HHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
KKLGVALDEEQIMAILLTNQYLDTLNQFAAGGNSTIFLPSGAEGAESLRTQILSAIKAGK
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDIIIFPLVILAIVLLILIFSLSTIVFVVKQQTVAIVERFGKYQFTASPGFHLKLPWGID
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCEEEECCCCHH
RIAARIQLRLLQTEMTVETKTADNVFVTMNIATQYRVNEQSIKDAYYKLMNPGEQIKAYI
HHHHHHHHHHHHHHHEEEEECCCCEEEEEEEEEEEECCHHHHHHHHHHHHCCHHHHHHHH
EDALRSAVPKLTLDDVFEKKDEIALEVQKTVAEEMQTYGYIIVKTLITKVEPDAEVKQSM
HHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
NEINAAQRKQDASQMLANANKIQVVTAAEAEAEKDRLHGVGIAEQRKAIVDGLAQQITEI
HHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
KKLGVALDEEQIMAILLTNQYLDTLNQFAAGGNSTIFLPSGAEGAESLRTQILSAIKAGK
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]