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The map label for this gene is ycbL [C]

Identifier: 125623377

GI number: 125623377

Start: 502253

End: 502885

Strand: Reverse

Name: ycbL [C]

Synonym: llmg_0510

Alternate gene names: 125623377

Gene position: 502885-502253 (Counterclockwise)

Preceding gene: 125623378

Following gene: 125623375

Centisome position: 19.88

GC content: 36.97

Gene sequence:

>633_bases
ATGATAATTGAAAAAATTGTTAATAAAATTGCTCAGGAAAATACCTATGTCCTGAGCAATTCTACTTCATACCTTATTAT
TGACCCAGGAAGTGATTCATCAGCACTTCTTGAGTATCTAAAACTTACTGACAAAGCGGTCTGTGCAATTTTACTAACTC
ATGCCCATTTTGATCATATCATGGGATTAAATGATTTAAAAAAATATTTCCCAAGCGCTCCAATCTATCTTCATCACTCA
GAAAAAGAATGGATGAAAAATCCTGAATTAAATGCCTCACTATTTTTTCTGGGAAAGGCAATTACTGGACCGGATGCTGA
GCAATTTTATAAAATTGGACAGGACTATAATTTAGATGGATTTAGATTTCGAGTTTTAGAAACTCCCGGGCATTCTATCG
GTGGAGTAAGTCTTCTCTTTGAAAGCGAAGGCGACTCCTGCCTGTTTAGTGGAGATGCTCTCTTTAAAAACGCTATTGGG
CGTTGGGATTTACCAACTGGGAATCAAGCACAACTTTTAGAATCAATTCGTGACCAACTTTTTAGACTCGATAATCAAAT
TCGTGTGCTGCCTGGTCATGGACCAGAGACGACAATTGGCGCTGAAAAACTTCATAATCCATTTTTCCAATAA

Upstream 100 bases:

>100_bases
TTGGACAGCGCCTGAGGGCGTCGCTCAACAAGGATCTGCTCTGGTTAAAACAGATAGTTCTGGTCAAACCGTTACACAAT
CTTCTGCTAATGGTGGCTAA

Downstream 100 bases:

>100_bases
AAAAAGCACTGACAGTTCTGTCAGTGCTTTTTTATTTAAATTTTAATGGTTTGGCCTGGATGAATCATATCGTTAATTCC
AAAACCATTGAGAGCGGCCA

Product: Zn-dependent hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MIIEKIVNKIAQENTYVLSNSTSYLIIDPGSDSSALLEYLKLTDKAVCAILLTHAHFDHIMGLNDLKKYFPSAPIYLHHS
EKEWMKNPELNASLFFLGKAITGPDAEQFYKIGQDYNLDGFRFRVLETPGHSIGGVSLLFESEGDSCLFSGDALFKNAIG
RWDLPTGNQAQLLESIRDQLFRLDNQIRVLPGHGPETTIGAEKLHNPFFQ

Sequences:

>Translated_210_residues
MIIEKIVNKIAQENTYVLSNSTSYLIIDPGSDSSALLEYLKLTDKAVCAILLTHAHFDHIMGLNDLKKYFPSAPIYLHHS
EKEWMKNPELNASLFFLGKAITGPDAEQFYKIGQDYNLDGFRFRVLETPGHSIGGVSLLFESEGDSCLFSGDALFKNAIG
RWDLPTGNQAQLLESIRDQLFRLDNQIRVLPGHGPETTIGAEKLHNPFFQ
>Mature_210_residues
MIIEKIVNKIAQENTYVLSNSTSYLIIDPGSDSSALLEYLKLTDKAVCAILLTHAHFDHIMGLNDLKKYFPSAPIYLHHS
EKEWMKNPELNASLFFLGKAITGPDAEQFYKIGQDYNLDGFRFRVLETPGHSIGGVSLLFESEGDSCLFSGDALFKNAIG
RWDLPTGNQAQLLESIRDQLFRLDNQIRVLPGHGPETTIGAEKLHNPFFQ

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787158, Length=207, Percent_Identity=31.4009661835749, Blast_Score=111, Evalue=3e-26,
Organism=Caenorhabditis elegans, GI17538952, Length=200, Percent_Identity=30, Blast_Score=78, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 23558; Mature: 23558

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIEKIVNKIAQENTYVLSNSTSYLIIDPGSDSSALLEYLKLTDKAVCAILLTHAHFDHI
CCHHHHHHHHHCCCEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MGLNDLKKYFPSAPIYLHHSEKEWMKNPELNASLFFLGKAITGPDAEQFYKIGQDYNLDG
CCHHHHHHHCCCCCEEEEECHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHCCCCCCCCC
FRFRVLETPGHSIGGVSLLFESEGDSCLFSGDALFKNAIGRWDLPTGNQAQLLESIRDQL
EEEEEEECCCCCCCCEEEEEECCCCEEEEECCHHHHHCCCCCCCCCCCHHHHHHHHHHHH
FRLDNQIRVLPGHGPETTIGAEKLHNPFFQ
HHCCCCEEEECCCCCCCCCCHHHHCCCCCC
>Mature Secondary Structure
MIIEKIVNKIAQENTYVLSNSTSYLIIDPGSDSSALLEYLKLTDKAVCAILLTHAHFDHI
CCHHHHHHHHHCCCEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MGLNDLKKYFPSAPIYLHHSEKEWMKNPELNASLFFLGKAITGPDAEQFYKIGQDYNLDG
CCHHHHHHHCCCCCEEEEECHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHCCCCCCCCC
FRFRVLETPGHSIGGVSLLFESEGDSCLFSGDALFKNAIGRWDLPTGNQAQLLESIRDQL
EEEEEEECCCCCCCCEEEEEECCCCEEEEECCHHHHHCCCCCCCCCCCHHHHHHHHHHHH
FRLDNQIRVLPGHGPETTIGAEKLHNPFFQ
HHCCCCEEEECCCCCCCCCCHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA