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The map label for this gene is ydiB [H]

Identifier: 125623326

GI number: 125623326

Start: 454115

End: 454561

Strand: Direct

Name: ydiB [H]

Synonym: llmg_0459

Alternate gene names: 125623326

Gene position: 454115-454561 (Clockwise)

Preceding gene: 125623325

Following gene: 125623327

Centisome position: 17.95

GC content: 35.35

Gene sequence:

>447_bases
ATGAAATTTAACGAAGAAGAAATGTTACAATTTGCTCAAAAATTGGGAAGAAAATTAGAAGCACAAGATGTGATTGTTTT
AACCGGTGAACTTGGAGCTGGGAAAACGACTTTTACCAAAGGATTGGCCTTAGGTTTAGATATTCATCAAATGGTTAAAA
GTCCGACTTATACAATTGTAAGGACACTTGATGGTCGACTTCCCCTTCATCACATGGACGTTTATCGAATTGGTGATGAT
CCAGATAGTTTTGATTTGGATGATTATTTATTTGGTGATGGCGTTTCAGTTATTGAGTGGGGGGAAATGCTTGGAGCTGA
TTTGCCAGAAAATTATCTTGAAGTCATTTTTGATAAGTATTCTCCAGATTTAATCAATGACCAAGAACGCGAGATTATCT
TGAAAGCACATGGAAAAAGATATGAGGAGCTTATCAATAATTTATGA

Upstream 100 bases:

>100_bases
CACTAATAAATTTATTGTGTACAAGCCTGCTGAAGCTCAGCGAAAAAATTATAGTCTTTGCTTTATCGGCTCCCAATCTG
GGATGTGATATAATAAAATC

Downstream 100 bases:

>100_bases
CTACAGAACTAATTGTCAGAGAAGCAAGCGGATTAGATAGCCCAAAAGTAATTGACTTTCTTAACAAAGTTGGGGCCGAA
AGTAATTTCTTGACCATTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MKFNEEEMLQFAQKLGRKLEAQDVIVLTGELGAGKTTFTKGLALGLDIHQMVKSPTYTIVRTLDGRLPLHHMDVYRIGDD
PDSFDLDDYLFGDGVSVIEWGEMLGADLPENYLEVIFDKYSPDLINDQEREIILKAHGKRYEELINNL

Sequences:

>Translated_148_residues
MKFNEEEMLQFAQKLGRKLEAQDVIVLTGELGAGKTTFTKGLALGLDIHQMVKSPTYTIVRTLDGRLPLHHMDVYRIGDD
PDSFDLDDYLFGDGVSVIEWGEMLGADLPENYLEVIFDKYSPDLINDQEREIILKAHGKRYEELINNL
>Mature_148_residues
MKFNEEEMLQFAQKLGRKLEAQDVIVLTGELGAGKTTFTKGLALGLDIHQMVKSPTYTIVRTLDGRLPLHHMDVYRIGDD
PDSFDLDDYLFGDGVSVIEWGEMLGADLPENYLEVIFDKYSPDLINDQEREIILKAHGKRYEELINNL

Specific function: Displays ATPase activity, which is modulated by the oligomeric status of the protein. The physiological partner is unknown [H]

COG id: COG0802

COG function: function code R; Predicted ATPase or kinase

Gene ontology:

Cell location: Cytoplasm. Note=Localized predominantly at the cell poles and at the periphery of the bacterium [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0079 family [H]

Homologues:

Organism=Escherichia coli, GI1790610, Length=150, Percent_Identity=33.3333333333333, Blast_Score=74, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003442 [H]

Pfam domain/function: PF02367 UPF0079 [H]

EC number: NA

Molecular weight: Translated: 16875; Mature: 16875

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFNEEEMLQFAQKLGRKLEAQDVIVLTGELGAGKTTFTKGLALGLDIHQMVKSPTYTIV
CCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCHHHHHCCCHHEEE
RTLDGRLPLHHMDVYRIGDDPDSFDLDDYLFGDGVSVIEWGEMLGADLPENYLEVIFDKY
EECCCCCCEEECEEEEECCCCCCCCCCHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHC
SPDLINDQEREIILKAHGKRYEELINNL
CCCCCCCCCCEEHHHHCCHHHHHHHHCC
>Mature Secondary Structure
MKFNEEEMLQFAQKLGRKLEAQDVIVLTGELGAGKTTFTKGLALGLDIHQMVKSPTYTIV
CCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCHHHHHCCCHHEEE
RTLDGRLPLHHMDVYRIGDDPDSFDLDDYLFGDGVSVIEWGEMLGADLPENYLEVIFDKY
EECCCCCCEEECEEEEECCCCCCCCCCHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHC
SPDLINDQEREIILKAHGKRYEELINNL
CCCCCCCCCCEEHHHHCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]