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The map label for this gene is ymaD [H]

Identifier: 125623266

GI number: 125623266

Start: 392012

End: 392446

Strand: Direct

Name: ymaD [H]

Synonym: llmg_0398

Alternate gene names: 125623266

Gene position: 392012-392446 (Clockwise)

Preceding gene: 125623265

Following gene: 125623270

Centisome position: 15.5

GC content: 38.16

Gene sequence:

>435_bases
ATGGTAAAACATCTTTTTAATTCACATATTGATTGGGTTGGTGGGAGAAATTCTATTGGTGACTTGCAAGCTGGGGCACT
TAATGAAAAAATTTCAATTCCTGAGACAATGGCTGGACCAGGAGTGGGGACCAATCCGGATGAAATGCTACTTGGAGCTG
CTAGCACCTGTTACTCAATTACTTTAGCGGCAATGCTTGAGCGAAATGAAATTCCTTTGGAACATTTAAAAGTAGAGGGA
CAAGGCGTGGTTGATGTGACAAAAGGAATTTTTACTTATGAAAAAATTACCTATCATGTTTTCATGAAACTAGCCGCCGG
GGCTGATGAAAGTAAAGCGATCAAATTGGCAGAACGTGCAGAAAGTTCTTGTATGATTTCAAGGGCAATTCAAGGAAATA
TAAAATTAGAAACGATCATTAAGATTGAAGAATAA

Upstream 100 bases:

>100_bases
TAAATAAAAGTCTGTCAGTGAACAGACTTTTTCTTGAATTTACTGACAGAAATCTCAGTAAGTAGCTGTAGGTGTTGTCA
GTAAAAGGAAAGGCTAAAAA

Downstream 100 bases:

>100_bases
AAAGTTACTGACAAAGATGTCAGTAACTTTTTTGATTTTATGCTAATTTAATCATTAGTTTTTATTTTTTCGACGTTCCA
AAAAGTCGAAAAGTAGCGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MVKHLFNSHIDWVGGRNSIGDLQAGALNEKISIPETMAGPGVGTNPDEMLLGAASTCYSITLAAMLERNEIPLEHLKVEG
QGVVDVTKGIFTYEKITYHVFMKLAAGADESKAIKLAERAESSCMISRAIQGNIKLETIIKIEE

Sequences:

>Translated_144_residues
MVKHLFNSHIDWVGGRNSIGDLQAGALNEKISIPETMAGPGVGTNPDEMLLGAASTCYSITLAAMLERNEIPLEHLKVEG
QGVVDVTKGIFTYEKITYHVFMKLAAGADESKAIKLAERAESSCMISRAIQGNIKLETIIKIEE
>Mature_144_residues
MVKHLFNSHIDWVGGRNSIGDLQAGALNEKISIPETMAGPGVGTNPDEMLLGAASTCYSITLAAMLERNEIPLEHLKVEG
QGVVDVTKGIFTYEKITYHVFMKLAAGADESKAIKLAERAESSCMISRAIQGNIKLETIIKIEE

Specific function: Unknown

COG id: COG1764

COG function: function code O; Predicted redox protein, regulator of disulfide bond formation

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the osmC/ohr family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015946
- InterPro:   IPR019905
- InterPro:   IPR003718 [H]

Pfam domain/function: PF02566 OsmC [H]

EC number: NA

Molecular weight: Translated: 15602; Mature: 15602

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKHLFNSHIDWVGGRNSIGDLQAGALNEKISIPETMAGPGVGTNPDEMLLGAASTCYSI
CCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCHHHHHHH
TLAAMLERNEIPLEHLKVEGQGVVDVTKGIFTYEKITYHVFMKLAAGADESKAIKLAERA
HHHHHHCCCCCCHHHEEECCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
ESSCMISRAIQGNIKLETIIKIEE
HHHHHHHHHHCCCEEEEEEEEECC
>Mature Secondary Structure
MVKHLFNSHIDWVGGRNSIGDLQAGALNEKISIPETMAGPGVGTNPDEMLLGAASTCYSI
CCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCHHHHHHH
TLAAMLERNEIPLEHLKVEGQGVVDVTKGIFTYEKITYHVFMKLAAGADESKAIKLAERA
HHHHHHCCCCCCHHHEEECCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
ESSCMISRAIQGNIKLETIIKIEE
HHHHHHHHHHCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]