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The map label for this gene is ywbD [H]

Identifier: 125623136

GI number: 125623136

Start: 249574

End: 250743

Strand: Direct

Name: ywbD [H]

Synonym: llmg_0263

Alternate gene names: 125623136

Gene position: 249574-250743 (Clockwise)

Preceding gene: 125623135

Following gene: 125623137

Centisome position: 9.87

GC content: 37.52

Gene sequence:

>1170_bases
ATGAAAAAAATTACAGTACGGACAAAAGCAGCAAAAAAACTGCGAGCGGGTTACCCACTTTTGGTGGCAGAAGATTTAAG
TTCACCTATTTCAGAGGATGATTTTGCACAGTTTTTTGATGAAAAAGCTCAAGCTCTTGGAACAGGCTATCTTTCAAAGC
AAAATAAAGGAATTGGTTGGTTGTTGAGTACCTCATCAGCAAAAATTGACCATCATTTTTATGTGGAAAAATTTGTTCAA
GCACGGAGCTTACGTGCTCCTTTTTTCCAAGATGAGTTGACGACAGCCTTCCGTCTGTTTAACGGCGAAGGTGATGGTTT
AGGAGGCTTAACCATTGATTTTTATAATGGTTTTGTTGTCTTTTCTTGGTATAATCCATTTATTTATAGTCAAAAAAAAG
CAATTGTCAAAGCTTTCCAAGTGGTTTTTCCTGACATTAAAGGGGCTTATGAAAAGCTGCGTTTTGCTGACAGTCAATTG
GAAAGTCAATATCTGTTCGGTGAGGAAGCGCAAGAACCTTTATTAGTCATGGAAAATGGGGTGACTTATGCGACATACTT
GAATGAAGGCTTAATGACAGGGATTTTTCTTGACCAAAAAAATGTCCGTGGAGCGCTTGTCAATGGCCTTGTGGCTGGCA
AAACTTTGTTGAATATGTTTAGTTATACAGGGGCTTTCTCAGTAGCTGCAGCCGTTGGTGGAGCAAGTCAAACCACTTCG
GTCGACTTGGCAAAACGATCACTTGATAAAACAAGAGAACAGTTTTTGGTCAATGGAATTGAACCAGACAGTCAAAAAAT
TTATGTGATGGATGTTTTTGGCTATTTTAATTATGCCAAGAAAAAGAATTTGACTTATGATATTGTTGTGCTTGACCCAC
CGTCATTTGCTCGCAATGGTAAAAAGACATTTTCGGTGGCCAAAAATTATGGGGAACTTGTGGAAGAAGCTGTGGATATC
CTCGAAAATAATGGAACGTTGATTGCTTCAACGAATGCGGCAAATGTTTCTGATAAGAAATTCCGTCAAATGGTTGAAGA
ATCTCTCAAAAATAAGGGAGTGAAATTTACCATTTTCCAAGAAGAAAAACTACCAGCTGATTTTCAGATTGCTGACAGCT
TTCCAGAAGGAAATTATCTTAAAGTTTTATTTATTAAAATCAAAAAATAG

Upstream 100 bases:

>100_bases
ATTGACAGCTTTCAGAGCTGTCAGTTTTTGTATCGTCAGATGGGGAGGACCAGTAAGGTGAACCATTGTTTCGTGTAACT
GGCTATGCTATAATTAAAAG

Downstream 100 bases:

>100_bases
TCTGTCAGTTGCTGACAGGCTTTTTGGTCAGTCATTTAAAAATGTGAGCGCTTTACTATCTGCTTTCTATATGATAAAAT
GCAGGAATAAGCTTAATTAT

Product: putative methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MKKITVRTKAAKKLRAGYPLLVAEDLSSPISEDDFAQFFDEKAQALGTGYLSKQNKGIGWLLSTSSAKIDHHFYVEKFVQ
ARSLRAPFFQDELTTAFRLFNGEGDGLGGLTIDFYNGFVVFSWYNPFIYSQKKAIVKAFQVVFPDIKGAYEKLRFADSQL
ESQYLFGEEAQEPLLVMENGVTYATYLNEGLMTGIFLDQKNVRGALVNGLVAGKTLLNMFSYTGAFSVAAAVGGASQTTS
VDLAKRSLDKTREQFLVNGIEPDSQKIYVMDVFGYFNYAKKKNLTYDIVVLDPPSFARNGKKTFSVAKNYGELVEEAVDI
LENNGTLIASTNAANVSDKKFRQMVEESLKNKGVKFTIFQEEKLPADFQIADSFPEGNYLKVLFIKIKK

Sequences:

>Translated_389_residues
MKKITVRTKAAKKLRAGYPLLVAEDLSSPISEDDFAQFFDEKAQALGTGYLSKQNKGIGWLLSTSSAKIDHHFYVEKFVQ
ARSLRAPFFQDELTTAFRLFNGEGDGLGGLTIDFYNGFVVFSWYNPFIYSQKKAIVKAFQVVFPDIKGAYEKLRFADSQL
ESQYLFGEEAQEPLLVMENGVTYATYLNEGLMTGIFLDQKNVRGALVNGLVAGKTLLNMFSYTGAFSVAAAVGGASQTTS
VDLAKRSLDKTREQFLVNGIEPDSQKIYVMDVFGYFNYAKKKNLTYDIVVLDPPSFARNGKKTFSVAKNYGELVEEAVDI
LENNGTLIASTNAANVSDKKFRQMVEESLKNKGVKFTIFQEEKLPADFQIADSFPEGNYLKVLFIKIKK
>Mature_389_residues
MKKITVRTKAAKKLRAGYPLLVAEDLSSPISEDDFAQFFDEKAQALGTGYLSKQNKGIGWLLSTSSAKIDHHFYVEKFVQ
ARSLRAPFFQDELTTAFRLFNGEGDGLGGLTIDFYNGFVVFSWYNPFIYSQKKAIVKAFQVVFPDIKGAYEKLRFADSQL
ESQYLFGEEAQEPLLVMENGVTYATYLNEGLMTGIFLDQKNVRGALVNGLVAGKTLLNMFSYTGAFSVAAAVGGASQTTS
VDLAKRSLDKTREQFLVNGIEPDSQKIYVMDVFGYFNYAKKKNLTYDIVVLDPPSFARNGKKTFSVAKNYGELVEEAVDI
LENNGTLIASTNAANVSDKKFRQMVEESLKNKGVKFTIFQEEKLPADFQIADSFPEGNYLKVLFIKIKK

Specific function: Unknown

COG id: COG1092

COG function: function code R; Predicted SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PUA domain [H]

Homologues:

Organism=Escherichia coli, GI145693111, Length=355, Percent_Identity=27.3239436619718, Blast_Score=152, Evalue=4e-38,
Organism=Escherichia coli, GI1787181, Length=274, Percent_Identity=28.1021897810219, Blast_Score=91, Evalue=9e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002478
- InterPro:   IPR015947
- InterPro:   IPR019614 [H]

Pfam domain/function: PF10672 Methyltrans_SAM [H]

EC number: NA

Molecular weight: Translated: 43447; Mature: 43447

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: PS50890 PUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKITVRTKAAKKLRAGYPLLVAEDLSSPISEDDFAQFFDEKAQALGTGYLSKQNKGIGW
CCEEEEHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCHHCCCCCCEEE
LLSTSSAKIDHHFYVEKFVQARSLRAPFFQDELTTAFRLFNGEGDGLGGLTIDFYNGFVV
EEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEECCCCCCCCCEEEEEECCEEE
FSWYNPFIYSQKKAIVKAFQVVFPDIKGAYEKLRFADSQLESQYLFGEEAQEPLLVMENG
EEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECC
VTYATYLNEGLMTGIFLDQKNVRGALVNGLVAGKTLLNMFSYTGAFSVAAAVGGASQTTS
CEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCH
VDLAKRSLDKTREQFLVNGIEPDSQKIYVMDVFGYFNYAKKKNLTYDIVVLDPPSFARNG
HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECHHHHHHHCCCCEEEEEEECCCHHHHCC
KKTFSVAKNYGELVEEAVDILENNGTLIASTNAANVSDKKFRQMVEESLKNKGVKFTIFQ
CHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEE
EEKLPADFQIADSFPEGNYLKVLFIKIKK
CCCCCCCEEEECCCCCCCEEEEEEEEECC
>Mature Secondary Structure
MKKITVRTKAAKKLRAGYPLLVAEDLSSPISEDDFAQFFDEKAQALGTGYLSKQNKGIGW
CCEEEEHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCHHCCCCCCEEE
LLSTSSAKIDHHFYVEKFVQARSLRAPFFQDELTTAFRLFNGEGDGLGGLTIDFYNGFVV
EEECCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEECCCCCCCCCEEEEEECCEEE
FSWYNPFIYSQKKAIVKAFQVVFPDIKGAYEKLRFADSQLESQYLFGEEAQEPLLVMENG
EEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECC
VTYATYLNEGLMTGIFLDQKNVRGALVNGLVAGKTLLNMFSYTGAFSVAAAVGGASQTTS
CEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCH
VDLAKRSLDKTREQFLVNGIEPDSQKIYVMDVFGYFNYAKKKNLTYDIVVLDPPSFARNG
HHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECHHHHHHHCCCCEEEEEEECCCHHHHCC
KKTFSVAKNYGELVEEAVDILENNGTLIASTNAANVSDKKFRQMVEESLKNKGVKFTIFQ
CHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEE
EEKLPADFQIADSFPEGNYLKVLFIKIKK
CCCCCCCEEEECCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]