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The map label for this gene is yfiN [H]

Identifier: 125623135

GI number: 125623135

Start: 248309

End: 249451

Strand: Direct

Name: yfiN [H]

Synonym: llmg_0262

Alternate gene names: 125623135

Gene position: 248309-249451 (Clockwise)

Preceding gene: 125623133

Following gene: 125623136

Centisome position: 9.82

GC content: 36.4

Gene sequence:

>1143_bases
ATGAGAATTATTGCCATTTTCAAGCGAATTATGCTTCAAAGGCGCGGAGACCCAAGGACACTTGCAATGATGTTTTTTGC
GCCAATATTTATTTTGACACTCATGTATTTTCTCTTTCAAGTACCATCCAATACTGCCTATCGAGTGGGCTTAAAGTCGG
ATAATACAGAATTAACGAAGGCTTTAAAAAAAATGCCAGATGATAAAGCTCATTTGGAAGTGGTAAATGTTTCTAAAAAT
AATCGCTTGACAATGAATGAGAAAGATTTGAGTGCAATTGTCAGCATTTCAGGGAAAAATATTAAGATTAGCTATGCCAA
TCAGTCAAATGGAACAAGTTCTGCGGTAAAAATGCTTTTAACGCAAGTAATTCAAGAAAACCAAGCAAAAGCGACTAAAG
AAGAGACTCAGCAGGCTTTGCAAAATTTGATGGATAAATTATCTCAAGTATCAGGACAAAGTGCTCCAACCAAACTGAGC
GTTAATACAGAGCAGTTTCAGATAAGAAGCAAGTATTTGTATGGAAATCCGACGAGTACAAATGCTACTTTTGATGATTT
AGCACCGATTTTAGTTGGCGCCTTTGCTTTCTTTTTAGTTCTTCTAATTTCAGGAATTTCCTTAGTGAATGAGCGAACAT
CAGGAACATTGGGAAGGATGCTAGTGACTCCTGTTAAACGAAGTGAGATTGTCACTGGCTATACTTTGAGTTATGGAATT
CTTGCGATGATTCAAACGGCACTCATGGTTATTTTTACCTATTGGATTTTAGGGGTTCATAATAATGGAAATATTGGTTG
GGTTTTTGTCATTAATTTCTTTATTGCAATCATTGCTTTGTTGTTCGGCTTGCTCTTATCCACATTAGCAAAAACAGAAT
TTCAATTTGTGCAGATGATTCCTTTGGCCATTATTCCACAATTTTTATTTTCGGGATTGATTCCTGTCGATACGATGCCA
ACAATTCTGCAAGGAATTGCCCACTGTATTCCAGTTTATTATGGGATTAGTGCCATGCAAGAAGTGGTTAAAAGGGGAAT
GGGTTTTTCAGGAATTTGGTTCGATTTGTTGATTATGTTCGTTTTTGCTGTCGTGCTTTATCTTGCAAATGTTTTAGCTT
TGAAAAATGTTCGCAGAACCTAA

Upstream 100 bases:

>100_bases
CTCCTAAGGAAATTAAAGAAAAATATCAAGTAGACTCGGTGGAAGAGGCTTTTATTGTGGCAGGAAAAACTTTAGAAATG
AAAGCTAAGGAGGTGGTGAG

Downstream 100 bases:

>100_bases
GTAAATAATTTTTATCCTATTGATTGACAGCTTTCAGAGCTGTCAGTTTTTGTATCGTCAGATGGGGAGGACCAGTAAGG
TGAACCATTGTTTCGTGTAA

Product: ABC transporter permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MRIIAIFKRIMLQRRGDPRTLAMMFFAPIFILTLMYFLFQVPSNTAYRVGLKSDNTELTKALKKMPDDKAHLEVVNVSKN
NRLTMNEKDLSAIVSISGKNIKISYANQSNGTSSAVKMLLTQVIQENQAKATKEETQQALQNLMDKLSQVSGQSAPTKLS
VNTEQFQIRSKYLYGNPTSTNATFDDLAPILVGAFAFFLVLLISGISLVNERTSGTLGRMLVTPVKRSEIVTGYTLSYGI
LAMIQTALMVIFTYWILGVHNNGNIGWVFVINFFIAIIALLFGLLLSTLAKTEFQFVQMIPLAIIPQFLFSGLIPVDTMP
TILQGIAHCIPVYYGISAMQEVVKRGMGFSGIWFDLLIMFVFAVVLYLANVLALKNVRRT

Sequences:

>Translated_380_residues
MRIIAIFKRIMLQRRGDPRTLAMMFFAPIFILTLMYFLFQVPSNTAYRVGLKSDNTELTKALKKMPDDKAHLEVVNVSKN
NRLTMNEKDLSAIVSISGKNIKISYANQSNGTSSAVKMLLTQVIQENQAKATKEETQQALQNLMDKLSQVSGQSAPTKLS
VNTEQFQIRSKYLYGNPTSTNATFDDLAPILVGAFAFFLVLLISGISLVNERTSGTLGRMLVTPVKRSEIVTGYTLSYGI
LAMIQTALMVIFTYWILGVHNNGNIGWVFVINFFIAIIALLFGLLLSTLAKTEFQFVQMIPLAIIPQFLFSGLIPVDTMP
TILQGIAHCIPVYYGISAMQEVVKRGMGFSGIWFDLLIMFVFAVVLYLANVLALKNVRRT
>Mature_380_residues
MRIIAIFKRIMLQRRGDPRTLAMMFFAPIFILTLMYFLFQVPSNTAYRVGLKSDNTELTKALKKMPDDKAHLEVVNVSKN
NRLTMNEKDLSAIVSISGKNIKISYANQSNGTSSAVKMLLTQVIQENQAKATKEETQQALQNLMDKLSQVSGQSAPTKLS
VNTEQFQIRSKYLYGNPTSTNATFDDLAPILVGAFAFFLVLLISGISLVNERTSGTLGRMLVTPVKRSEIVTGYTLSYGI
LAMIQTALMVIFTYWILGVHNNGNIGWVFVINFFIAIIALLFGLLLSTLAKTEFQFVQMIPLAIIPQFLFSGLIPVDTMP
TILQGIAHCIPVYYGISAMQEVVKRGMGFSGIWFDLLIMFVFAVVLYLANVLALKNVRRT

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787011, Length=252, Percent_Identity=23.4126984126984, Blast_Score=69, Evalue=6e-13,
Organism=Escherichia coli, GI1787010, Length=237, Percent_Identity=24.4725738396624, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI226510979, Length=185, Percent_Identity=27.027027027027, Blast_Score=63, Evalue=4e-11,
Organism=Escherichia coli, GI48994943, Length=387, Percent_Identity=23.7726098191214, Blast_Score=62, Evalue=7e-11,
Organism=Drosophila melanogaster, GI24650853, Length=176, Percent_Identity=31.25, Blast_Score=96, Evalue=4e-20,
Organism=Drosophila melanogaster, GI24650855, Length=176, Percent_Identity=31.25, Blast_Score=96, Evalue=4e-20,
Organism=Drosophila melanogaster, GI24582014, Length=207, Percent_Identity=25.6038647342995, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24582012, Length=207, Percent_Identity=25.6038647342995, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 42356; Mature: 42356

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIIAIFKRIMLQRRGDPRTLAMMFFAPIFILTLMYFLFQVPSNTAYRVGLKSDNTELTK
CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHH
ALKKMPDDKAHLEVVNVSKNNRLTMNEKDLSAIVSISGKNIKISYANQSNGTSSAVKMLL
HHHHCCCCCHHEEEEEECCCCCEEECHHHHHHHHEECCCEEEEEECCCCCCHHHHHHHHH
TQVIQENQAKATKEETQQALQNLMDKLSQVSGQSAPTKLSVNTEQFQIRSKYLYGNPTST
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHEEECCCCCC
NATFDDLAPILVGAFAFFLVLLISGISLVNERTSGTLGRMLVTPVKRSEIVTGYTLSYGI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHEEECHHHHHHH
LAMIQTALMVIFTYWILGVHNNGNIGWVFVINFFIAIIALLFGLLLSTLAKTEFQFVQMI
HHHHHHHHHHHHHHHHHEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLAIIPQFLFSGLIPVDTMPTILQGIAHCIPVYYGISAMQEVVKRGMGFSGIWFDLLIMF
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
VFAVVLYLANVLALKNVRRT
HHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRIIAIFKRIMLQRRGDPRTLAMMFFAPIFILTLMYFLFQVPSNTAYRVGLKSDNTELTK
CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHH
ALKKMPDDKAHLEVVNVSKNNRLTMNEKDLSAIVSISGKNIKISYANQSNGTSSAVKMLL
HHHHCCCCCHHEEEEEECCCCCEEECHHHHHHHHEECCCEEEEEECCCCCCHHHHHHHHH
TQVIQENQAKATKEETQQALQNLMDKLSQVSGQSAPTKLSVNTEQFQIRSKYLYGNPTST
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHEEECCCCCC
NATFDDLAPILVGAFAFFLVLLISGISLVNERTSGTLGRMLVTPVKRSEIVTGYTLSYGI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHEEECHHHHHHH
LAMIQTALMVIFTYWILGVHNNGNIGWVFVINFFIAIIALLFGLLLSTLAKTEFQFVQMI
HHHHHHHHHHHHHHHHHEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLAIIPQFLFSGLIPVDTMPTILQGIAHCIPVYYGISAMQEVVKRGMGFSGIWFDLLIMF
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
VFAVVLYLANVLALKNVRRT
HHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8973323; 9384377 [H]