| Definition | Lactococcus lactis subsp. cremoris MG1363, complete genome. |
|---|---|
| Accession | NC_009004 |
| Length | 2,529,478 |
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The map label for this gene is 125623122
Identifier: 125623122
GI number: 125623122
Start: 233677
End: 234555
Strand: Reverse
Name: 125623122
Synonym: llmg_0246
Alternate gene names: NA
Gene position: 234555-233677 (Counterclockwise)
Preceding gene: 125623123
Following gene: 125623121
Centisome position: 9.27
GC content: 39.36
Gene sequence:
>879_bases ATGAAAATTACACTTTTAGGTTCATTAGGAAATATCAATCGGCATTTTATCCCAAGATTAATCGCTGACGGACATGAAGT CACTGTCATTACTTCACGTCCCGAAGGGGCTGCGGCTATTGAAAAGCTCGGTGCGAAAGCTGCGGTTGGATTAAATACTG ACCTCGACTTTCTCAGCCGAACTTTCACTGGTTCTGATTTGGTTTATCTCATGATTACGGGTATTGCTTTTTCTTCAGCA ACATCAATGTCAGATTTGGCAAAAATTTACAGTCAGGCCATCAAAAAGGCTGATGTCAAAAAAGTCATTAACCTTAGCTC AGTCGGTGCCCAAAGCCCAGAAGCTGGGATTCTCTACGAATATCATGCCATGGAAGATGGGCTTGATGAACTCACTGGTG TTACCGTTAAACACATTCGTCCCGTTGGTTTTTATACCAATTTACTGACAGAAATTGCGCTACTTAAGGCTCAAGGAAAA ATTTTTGAAGCCATCAGTCCTGAAACAATGCGGGCTTGGGTTCATCCAAGTGATATTGCTGATGCTGTTTACAATCGTAT CAATGATTTACTGACGGACAAAGCTGTCAGTAAAATAAAACATGTCGTTTCTGATTGGGCAACAGGTACTGATTGGGTCA ATGCCTTAGGAACTAATAACATTTCTGCCCAATATGTCACTATTTCTGTGGAAGATTTGATAGAAAACTTTGTCAAAGCA GGTCTTCCAAAAGTTGTGGCAGATGGATTTGGTCAAATGAATCAATTTCAACAAAGCCCTGACAAACTCTACCAAGAAAT CAAATCCTCAAACTATCATCATGGCAAAGTCAAAATAAATGATTTTGCTAAAGAATTTGCACAAGTTTACTATCAATAA
Upstream 100 bases:
>100_bases TCATCGTTTGAAAGAAGATTTTGACTTCAACTTCCTCTATCCGTCTATCACTGACGCAAAAGACGCCAACGCCCTTTAAA AAATAGAAAAGAGAACAAAT
Downstream 100 bases:
>100_bases TCCATTTCAAAGGAGAAAATAAATGGTTAAAGCACTACAATATAAAAGATTTGGACAACCAGAAGTTCTTGAACTTGTTG ACCTCCTAACCTTAGAACCC
Product: hypothetical protein
Products: NA
Alternate protein names: Sugar Nucleotide Epimerase; NAD Dependent Epimerase/Dehydratase Family Protein
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MKITLLGSLGNINRHFIPRLIADGHEVTVITSRPEGAAAIEKLGAKAAVGLNTDLDFLSRTFTGSDLVYLMITGIAFSSA TSMSDLAKIYSQAIKKADVKKVINLSSVGAQSPEAGILYEYHAMEDGLDELTGVTVKHIRPVGFYTNLLTEIALLKAQGK IFEAISPETMRAWVHPSDIADAVYNRINDLLTDKAVSKIKHVVSDWATGTDWVNALGTNNISAQYVTISVEDLIENFVKA GLPKVVADGFGQMNQFQQSPDKLYQEIKSSNYHHGKVKINDFAKEFAQVYYQ
Sequences:
>Translated_292_residues MKITLLGSLGNINRHFIPRLIADGHEVTVITSRPEGAAAIEKLGAKAAVGLNTDLDFLSRTFTGSDLVYLMITGIAFSSA TSMSDLAKIYSQAIKKADVKKVINLSSVGAQSPEAGILYEYHAMEDGLDELTGVTVKHIRPVGFYTNLLTEIALLKAQGK IFEAISPETMRAWVHPSDIADAVYNRINDLLTDKAVSKIKHVVSDWATGTDWVNALGTNNISAQYVTISVEDLIENFVKA GLPKVVADGFGQMNQFQQSPDKLYQEIKSSNYHHGKVKINDFAKEFAQVYYQ >Mature_292_residues MKITLLGSLGNINRHFIPRLIADGHEVTVITSRPEGAAAIEKLGAKAAVGLNTDLDFLSRTFTGSDLVYLMITGIAFSSA TSMSDLAKIYSQAIKKADVKKVINLSSVGAQSPEAGILYEYHAMEDGLDELTGVTVKHIRPVGFYTNLLTEIALLKAQGK IFEAISPETMRAWVHPSDIADAVYNRINDLLTDKAVSKIKHVVSDWATGTDWVNALGTNNISAQYVTISVEDLIENFVKA GLPKVVADGFGQMNQFQQSPDKLYQEIKSSNYHHGKVKINDFAKEFAQVYYQ
Specific function: Unknown
COG id: COG0702
COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31999; Mature: 31999
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKITLLGSLGNINRHFIPRLIADGHEVTVITSRPEGAAAIEKLGAKAAVGLNTDLDFLSR CEEEEEECCCCCCHHHHHHHHCCCCEEEEEECCCCCHHHHHHHCCHHEECCCCCHHHHHH TFTGSDLVYLMITGIAFSSATSMSDLAKIYSQAIKKADVKKVINLSSVGAQSPEAGILYE HCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE YHAMEDGLDELTGVTVKHIRPVGFYTNLLTEIALLKAQGKIFEAISPETMRAWVHPSDIA HHHHHCCHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHCCCHHHH DAVYNRINDLLTDKAVSKIKHVVSDWATGTDWVNALGTNNISAQYVTISVEDLIENFVKA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHC GLPKVVADGFGQMNQFQQSPDKLYQEIKSSNYHHGKVKINDFAKEFAQVYYQ CCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHCC >Mature Secondary Structure MKITLLGSLGNINRHFIPRLIADGHEVTVITSRPEGAAAIEKLGAKAAVGLNTDLDFLSR CEEEEEECCCCCCHHHHHHHHCCCCEEEEEECCCCCHHHHHHHCCHHEECCCCCHHHHHH TFTGSDLVYLMITGIAFSSATSMSDLAKIYSQAIKKADVKKVINLSSVGAQSPEAGILYE HCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE YHAMEDGLDELTGVTVKHIRPVGFYTNLLTEIALLKAQGKIFEAISPETMRAWVHPSDIA HHHHHCCHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHCCCHHHH DAVYNRINDLLTDKAVSKIKHVVSDWATGTDWVNALGTNNISAQYVTISVEDLIENFVKA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHC GLPKVVADGFGQMNQFQQSPDKLYQEIKSSNYHHGKVKINDFAKEFAQVYYQ CCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA