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The map label for this gene is rgpB [H]

Identifier: 125623089

GI number: 125623089

Start: 200717

End: 201658

Strand: Direct

Name: rgpB [H]

Synonym: llmg_0212

Alternate gene names: 125623089

Gene position: 200717-201658 (Clockwise)

Preceding gene: 125623088

Following gene: 125623090

Centisome position: 7.94

GC content: 35.77

Gene sequence:

>942_bases
ATGAGTGTTAATATATTAATGTCAACCTACAACGGCGAAAAGTTCGTCGCTGAGCAGATTGAAAGTATTCAAAAACAAAC
ATATACTGATTGGAATTTAATAATTCGTGATGACGGTTCAAAAGATGGAACTTGCGAAATTATTGAAAACTTTATTAATA
ATGACAGCCGAATCAAACTGATTCGAGCAGAAAATGTTGGGGTCATTAAATCTTTTCATGAACTCGTAATAAATAATAAT
GATGCTGATTTCTATTTTTTTGCTGACCAAGATGATTATTGGCTGCCAGAAAAACTGACAATAATGTTAGAAGAAGCTAA
GAAGCACGATAATACAATTCCAGTCATGTATTACACAGATTTGAAAGTGACGGATAAAGATTTAAATGTCACATCAGAAT
CAATGATTCGTAGTCAATCTGACCATGCCAATACAAGCCTTGTCCAAGAACTGACAGAAAATACGGTCACCGGTGGTGCG
AGTATGATTAATCATGAACTTGCGAAACTCTGGCAAACAACAAATGACATTATCATGCATGATTGGTATCTAGCGATAGT
GGCAGCAGCACTTGGAGAACTGGTTTATATTGACCAACCCACTCACCTTTATCGTCAGCATGATTCAAATGTTCTGGGCG
CAAGGACTCTTGCAAAGCGCATAAGAAAATGGACACACCCTAACTTATGGTTTGAAAAATATTGGTGGCTTATTACAGCA
AGTCAAAAACAAGCTCAAAAATTACTGACAGAAAATCTGTCAGCTCTGTCTGAAACAGACAAGGCGTTAGTGACAGACTA
TGTCAATATTTTAAACCAATCAAAAGCTGAGCGTCGTCAGATTCTTGACCGATATGATTTGCGTAAAAACAAAAACTATC
ATACAAGTATTTTTCGTACACTTATCATCACAAAATTTGCATACAAAGGAAAAAACAAATGA

Upstream 100 bases:

>100_bases
TGGGAACACATTTGTGACCAATACGAGGAACTTTTCTTTCCTAATTCTACCGATAAGACTGAGTCTGAAACGAAAATGGA
GAACCTAGCCAGAGGCGGAG

Downstream 100 bases:

>100_bases
ATTTCTTCAGCCGTAGAAATCAAATTCTACTTAAAGAGTTAATTAAAACTGACTTTAAACTTCGTTACCAAGGAAGTGTT
ATAGGTTACTTATGGTCTAT

Product: rhamnosyltransferase RgpB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 312

Protein sequence:

>313_residues
MSVNILMSTYNGEKFVAEQIESIQKQTYTDWNLIIRDDGSKDGTCEIIENFINNDSRIKLIRAENVGVIKSFHELVINNN
DADFYFFADQDDYWLPEKLTIMLEEAKKHDNTIPVMYYTDLKVTDKDLNVTSESMIRSQSDHANTSLVQELTENTVTGGA
SMINHELAKLWQTTNDIIMHDWYLAIVAAALGELVYIDQPTHLYRQHDSNVLGARTLAKRIRKWTHPNLWFEKYWWLITA
SQKQAQKLLTENLSALSETDKALVTDYVNILNQSKAERRQILDRYDLRKNKNYHTSIFRTLIITKFAYKGKNK

Sequences:

>Translated_313_residues
MSVNILMSTYNGEKFVAEQIESIQKQTYTDWNLIIRDDGSKDGTCEIIENFINNDSRIKLIRAENVGVIKSFHELVINNN
DADFYFFADQDDYWLPEKLTIMLEEAKKHDNTIPVMYYTDLKVTDKDLNVTSESMIRSQSDHANTSLVQELTENTVTGGA
SMINHELAKLWQTTNDIIMHDWYLAIVAAALGELVYIDQPTHLYRQHDSNVLGARTLAKRIRKWTHPNLWFEKYWWLITA
SQKQAQKLLTENLSALSETDKALVTDYVNILNQSKAERRQILDRYDLRKNKNYHTSIFRTLIITKFAYKGKNK
>Mature_312_residues
SVNILMSTYNGEKFVAEQIESIQKQTYTDWNLIIRDDGSKDGTCEIIENFINNDSRIKLIRAENVGVIKSFHELVINNND
ADFYFFADQDDYWLPEKLTIMLEEAKKHDNTIPVMYYTDLKVTDKDLNVTSESMIRSQSDHANTSLVQELTENTVTGGAS
MINHELAKLWQTTNDIIMHDWYLAIVAAALGELVYIDQPTHLYRQHDSNVLGARTLAKRIRKWTHPNLWFEKYWWLITAS
QKQAQKLLTENLSALSETDKALVTDYVNILNQSKAERRQILDRYDLRKNKNYHTSIFRTLIITKFAYKGKNK

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 36468; Mature: 36336

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVNILMSTYNGEKFVAEQIESIQKQTYTDWNLIIRDDGSKDGTCEIIENFINNDSRIKL
CCEEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEE
IRAENVGVIKSFHELVINNNDADFYFFADQDDYWLPEKLTIMLEEAKKHDNTIPVMYYTD
EEECCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEC
LKVTDKDLNVTSESMIRSQSDHANTSLVQELTENTVTGGASMINHELAKLWQTTNDIIMH
EEEECCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHH
DWYLAIVAAALGELVYIDQPTHLYRQHDSNVLGARTLAKRIRKWTHPNLWFEKYWWLITA
HHHHHHHHHHHCCEEEECCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEEC
SQKQAQKLLTENLSALSETDKALVTDYVNILNQSKAERRQILDRYDLRKNKNYHTSIFRT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHH
LIITKFAYKGKNK
HHHHHHHHCCCCC
>Mature Secondary Structure 
SVNILMSTYNGEKFVAEQIESIQKQTYTDWNLIIRDDGSKDGTCEIIENFINNDSRIKL
CEEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEE
IRAENVGVIKSFHELVINNNDADFYFFADQDDYWLPEKLTIMLEEAKKHDNTIPVMYYTD
EEECCCHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEC
LKVTDKDLNVTSESMIRSQSDHANTSLVQELTENTVTGGASMINHELAKLWQTTNDIIMH
EEEECCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHH
DWYLAIVAAALGELVYIDQPTHLYRQHDSNVLGARTLAKRIRKWTHPNLWFEKYWWLITA
HHHHHHHHHHHCCEEEECCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEEEC
SQKQAQKLLTENLSALSETDKALVTDYVNILNQSKAERRQILDRYDLRKNKNYHTSIFRT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHH
LIITKFAYKGKNK
HHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7507920; 12384590; 12704152 [H]