| Definition | Lactococcus lactis subsp. cremoris MG1363, complete genome. |
|---|---|
| Accession | NC_009004 |
| Length | 2,529,478 |
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The map label for this gene is yihX [H]
Identifier: 125622996
GI number: 125622996
Start: 110683
End: 111306
Strand: Direct
Name: yihX [H]
Synonym: llmg_0117
Alternate gene names: 125622996
Gene position: 110683-111306 (Clockwise)
Preceding gene: 125622995
Following gene: 125622997
Centisome position: 4.38
GC content: 32.53
Gene sequence:
>624_bases ATGACTGTAAAAAATATTATTTTTGATTTGGGTGGAGTAATTTTAGATTTAGGTTTTACGCGAATGATTAATTCTTTTGA GCAACTTGGCGTCAAGGATTTTTCTAGCTACTTTAATCCACAAAAACAAGTTGATTTTTTTGAAGAACTAGAATTAGGAC ATATATCACCAGACGTTTTCTACGATGAGTTTAGAAAAGCGACTAAAAGCCAGCTGACAGACGAAGTAATTGAAGAAAAT TGGAATTTAATTCTAAAAGATTTTCAAAAAGAACGAATGAATTTACTGACAGACTTGTCAGCAGATTTTTCACTTTATCT TTTCTCAAATACCAACGCTATTCATGCTAAATGTTTTGAGCAACGTTGTATCGAACAAATGGGTCAGCCTTTAGCAACTT ATTTTACAAAAGCCTATTATTCACATGAATTACATTTAAGAAAACCAACAGTTGAAAGTTTTCACGAGGTTCTCCGTCAG TCCAATTTAAAGGCTGATGAAACTTTATTTATTGATGACAATGCGGACAATATCTTAGGAGCGCAGGCAGCGGGTCTAAA AACTTATCATCTGAAAGCACCAGAAGTACTGACAGAAATTGATTTTAATAAAATAATTTACTGA
Upstream 100 bases:
>100_bases TTAACTTTTTATTCCGCATGGTCAATGACCGAAATCAGGAAGAAGAAGTTTATGCTGCGACACGTTCTATCGGTGTTCCC TATTTGAAAGAAGGTTAATA
Downstream 100 bases:
>100_bases CGAATCTGTCAGTATTTTTTTGAAAAAAATTTTATACTGCATAAAGTTAATTCTTGACAATTGTCTGACAATTCGGTAAA ATACAGTTTATTGAAATTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MTVKNIIFDLGGVILDLGFTRMINSFEQLGVKDFSSYFNPQKQVDFFEELELGHISPDVFYDEFRKATKSQLTDEVIEEN WNLILKDFQKERMNLLTDLSADFSLYLFSNTNAIHAKCFEQRCIEQMGQPLATYFTKAYYSHELHLRKPTVESFHEVLRQ SNLKADETLFIDDNADNILGAQAAGLKTYHLKAPEVLTEIDFNKIIY
Sequences:
>Translated_207_residues MTVKNIIFDLGGVILDLGFTRMINSFEQLGVKDFSSYFNPQKQVDFFEELELGHISPDVFYDEFRKATKSQLTDEVIEEN WNLILKDFQKERMNLLTDLSADFSLYLFSNTNAIHAKCFEQRCIEQMGQPLATYFTKAYYSHELHLRKPTVESFHEVLRQ SNLKADETLFIDDNADNILGAQAAGLKTYHLKAPEVLTEIDFNKIIY >Mature_206_residues TVKNIIFDLGGVILDLGFTRMINSFEQLGVKDFSSYFNPQKQVDFFEELELGHISPDVFYDEFRKATKSQLTDEVIEENW NLILKDFQKERMNLLTDLSADFSLYLFSNTNAIHAKCFEQRCIEQMGQPLATYFTKAYYSHELHLRKPTVESFHEVLRQS NLKADETLFIDDNADNILGAQAAGLKTYHLKAPEVLTEIDFNKIIY
Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrate beta-glucose 1-phosphate [H]
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. YihX family [H]
Homologues:
Organism=Escherichia coli, GI87082345, Length=187, Percent_Identity=26.7379679144385, Blast_Score=74, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 24028; Mature: 23896
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVKNIIFDLGGVILDLGFTRMINSFEQLGVKDFSSYFNPQKQVDFFEELELGHISPDVF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCHHHHHHHHHHHCCCCCHHHH YDEFRKATKSQLTDEVIEENWNLILKDFQKERMNLLTDLSADFSLYLFSNTNAIHAKCFE HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHH QRCIEQMGQPLATYFTKAYYSHELHLRKPTVESFHEVLRQSNLKADETLFIDDNADNILG HHHHHHHCCHHHHHHHHHHHHCHHEECCCCHHHHHHHHHHCCCCCCCEEEEECCCCCHHC AQAAGLKTYHLKAPEVLTEIDFNKIIY CHHCCCEEEECCCHHHHHHCCHHHHCC >Mature Secondary Structure TVKNIIFDLGGVILDLGFTRMINSFEQLGVKDFSSYFNPQKQVDFFEELELGHISPDVF CHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCHHHHHHHHHHHCCCCCHHHH YDEFRKATKSQLTDEVIEENWNLILKDFQKERMNLLTDLSADFSLYLFSNTNAIHAKCFE HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHH QRCIEQMGQPLATYFTKAYYSHELHLRKPTVESFHEVLRQSNLKADETLFIDDNADNILG HHHHHHHCCHHHHHHHHHHHHCHHEECCCCHHHHHHHHHHCCCCCCCEEEEECCCCCHHC AQAAGLKTYHLKAPEVLTEIDFNKIIY CHHCCCEEEECCCHHHHHHCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8346018; 9278503 [H]