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The map label for this gene is ykpA [H]

Identifier: 125622964

GI number: 125622964

Start: 80129

End: 81766

Strand: Reverse

Name: ykpA [H]

Synonym: llmg_0085

Alternate gene names: 125622964

Gene position: 81766-80129 (Counterclockwise)

Preceding gene: 125622966

Following gene: 125622963

Centisome position: 3.23

GC content: 39.07

Gene sequence:

>1638_bases
ATGCTTACAGTATCTGATATTTCATTACAATTCTCTGACCGCAAGCTTTTTGACGAAGTAAACATCAAGTTTACACCGGG
AAACTGTTATGGTTTAATTGGTGCCAATGGTGCCGGTAAATCAACTTTCTTGAAAATCTTGGACGGCGAAATTCAACCCA
CAACAGGTCATATTTCAATGGGGCCAAATGAGCGGATGTCCGTTCTTCGTCAAAATCACTACGACTATGAAGATCAAACA
CCACTTGATGTTGTGATGATGGGGAATGAAAAACTTTTCGCCATTAATCAAGAAAAAAATGCCATCTACATGAATCCTGA
CGCAACAGATGATGACTTCATGAAAGCTGCTGAACTTGAAGCCGAATTTGGCGAAATGGGCGGCTATGAAGCCGAAGCTG
ACGCTGCTCGTCTTTTGCAAAACCTCGGCATTAAAGCTGAACAACATACGGATTTGATGGCTAATTTGACTTCTGGCGAA
CACGTGAAAGTTCTTCTTGCTAAAGCCCTTTTTGGTAAACCTGACGTCCTTCTTCTTGACGAACCAACCAATGGACTAGA
TATTCAAGCGATTGCTTGGCTTGAAGACTTTTTGATTAATTTTGAAAATACCGTTATCGTCGTTTCCCATGACCGTCACT
TCTTGAACAATGTTTGTACTTACATGGCTGACCTTGACTATGGTAAAATCAAACTTTACCCAGGGAACTATGATTTCTGG
AAAGAATCTTCTGAGCTCGCTCTTCGTTTGCAAGGCGACCAAAATCGTAAAGCTGAAGAAAAAATTGCTGAGTTGAAAGA
GTTTATCGCTCGTTTCTCTGCCAATGCCTCTAAATCAAAACAAGCGACATCACGTAAAAAAATGCTTGATAAAATTGAAG
TTGAAGAATTCGTTCCTTCATCACGCAAGTACCCATTTGTTGGTTTTGAACAAGAACGCGAAATCGGAAATGACTTGCTC
CGTGTTGAAAATCTTTCAGTTGCGATTGATGAAGAAATGATTATTGAAAACATTTCATTCATCTTAAATCCTGGCGATAA
AACAGTTTTCATTGGTCAAAATGATATCCAACAAACAACATTACTTCGTGCATTGATGGATGATGTGGAAGATAACTGGA
CAGTCACTGGCGATATTAAATGGGGAGTAACTTCTTCTCGTTCATATCTTCCTAAAGATAACAGCAAAGATTTTGATTCA
AATGAACCAATCCTTGACTGGTTGCGTCAATTTGTATTGACAAAAGAAGAAGACGATAATACGTATCTTCGTGGCTTCCT
TGGACGTATGCTTTTCAAAGGTGAAGAATCTTTGAAGGCTGTCAATGTCCTTTCAGGGGGAGAAAAAGTTCGTGTGATGC
TCTCTAAAATGATGCTTCAACGTGCTAATGTGCTTGTTCTTGATGACCCAACCAATCACTTGGACTTGGAATCAATTTCT
GCGCTTAATGACGGTTTGAAATCATTTAAAGGTTCAATCCTCTTTGCTTCACATGACCATGAATTTATTAATACCATTGC
CAACCACATCGTTGTTCTTGGTAAATCTGGTGTTATTGATCGTATCGGTGAAACTTATGACGACTTCTTAGATAATGCGG
AAGTTCAAGAAAAAGTTAAAGAACTCTGGGCTGATTAA

Upstream 100 bases:

>100_bases
TAAAATAAGGGCAGAATGCTTATTTTTAAGCACAAAAGTAGTCAAACTACTTTATCGAAAAATAATTGAGATTTTTCTCA
TCAGTAAAAAGGAAAAAATA

Downstream 100 bases:

>100_bases
TTATTGGTGCTGACCATTCTGTCAGCAATTATTACTACTATTCAAATAGTTTACACTAGAGTGTAAACTAAGTTTACAGC
TCTGTCAGTAAAACGCGACC

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 545; Mature: 545

Protein sequence:

>545_residues
MLTVSDISLQFSDRKLFDEVNIKFTPGNCYGLIGANGAGKSTFLKILDGEIQPTTGHISMGPNERMSVLRQNHYDYEDQT
PLDVVMMGNEKLFAINQEKNAIYMNPDATDDDFMKAAELEAEFGEMGGYEAEADAARLLQNLGIKAEQHTDLMANLTSGE
HVKVLLAKALFGKPDVLLLDEPTNGLDIQAIAWLEDFLINFENTVIVVSHDRHFLNNVCTYMADLDYGKIKLYPGNYDFW
KESSELALRLQGDQNRKAEEKIAELKEFIARFSANASKSKQATSRKKMLDKIEVEEFVPSSRKYPFVGFEQEREIGNDLL
RVENLSVAIDEEMIIENISFILNPGDKTVFIGQNDIQQTTLLRALMDDVEDNWTVTGDIKWGVTSSRSYLPKDNSKDFDS
NEPILDWLRQFVLTKEEDDNTYLRGFLGRMLFKGEESLKAVNVLSGGEKVRVMLSKMMLQRANVLVLDDPTNHLDLESIS
ALNDGLKSFKGSILFASHDHEFINTIANHIVVLGKSGVIDRIGETYDDFLDNAEVQEKVKELWAD

Sequences:

>Translated_545_residues
MLTVSDISLQFSDRKLFDEVNIKFTPGNCYGLIGANGAGKSTFLKILDGEIQPTTGHISMGPNERMSVLRQNHYDYEDQT
PLDVVMMGNEKLFAINQEKNAIYMNPDATDDDFMKAAELEAEFGEMGGYEAEADAARLLQNLGIKAEQHTDLMANLTSGE
HVKVLLAKALFGKPDVLLLDEPTNGLDIQAIAWLEDFLINFENTVIVVSHDRHFLNNVCTYMADLDYGKIKLYPGNYDFW
KESSELALRLQGDQNRKAEEKIAELKEFIARFSANASKSKQATSRKKMLDKIEVEEFVPSSRKYPFVGFEQEREIGNDLL
RVENLSVAIDEEMIIENISFILNPGDKTVFIGQNDIQQTTLLRALMDDVEDNWTVTGDIKWGVTSSRSYLPKDNSKDFDS
NEPILDWLRQFVLTKEEDDNTYLRGFLGRMLFKGEESLKAVNVLSGGEKVRVMLSKMMLQRANVLVLDDPTNHLDLESIS
ALNDGLKSFKGSILFASHDHEFINTIANHIVVLGKSGVIDRIGETYDDFLDNAEVQEKVKELWAD
>Mature_545_residues
MLTVSDISLQFSDRKLFDEVNIKFTPGNCYGLIGANGAGKSTFLKILDGEIQPTTGHISMGPNERMSVLRQNHYDYEDQT
PLDVVMMGNEKLFAINQEKNAIYMNPDATDDDFMKAAELEAEFGEMGGYEAEADAARLLQNLGIKAEQHTDLMANLTSGE
HVKVLLAKALFGKPDVLLLDEPTNGLDIQAIAWLEDFLINFENTVIVVSHDRHFLNNVCTYMADLDYGKIKLYPGNYDFW
KESSELALRLQGDQNRKAEEKIAELKEFIARFSANASKSKQATSRKKMLDKIEVEEFVPSSRKYPFVGFEQEREIGNDLL
RVENLSVAIDEEMIIENISFILNPGDKTVFIGQNDIQQTTLLRALMDDVEDNWTVTGDIKWGVTSSRSYLPKDNSKDFDS
NEPILDWLRQFVLTKEEDDNTYLRGFLGRMLFKGEESLKAVNVLSGGEKVRVMLSKMMLQRANVLVLDDPTNHLDLESIS
ALNDGLKSFKGSILFASHDHEFINTIANHIVVLGKSGVIDRIGETYDDFLDNAEVQEKVKELWAD

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=553, Percent_Identity=29.6564195298373, Blast_Score=225, Evalue=7e-59,
Organism=Homo sapiens, GI27881506, Length=548, Percent_Identity=30.2919708029197, Blast_Score=218, Evalue=2e-56,
Organism=Homo sapiens, GI10947137, Length=548, Percent_Identity=30.2919708029197, Blast_Score=217, Evalue=2e-56,
Organism=Homo sapiens, GI69354671, Length=556, Percent_Identity=26.6187050359712, Blast_Score=158, Evalue=2e-38,
Organism=Homo sapiens, GI10947135, Length=556, Percent_Identity=26.6187050359712, Blast_Score=157, Evalue=2e-38,
Organism=Homo sapiens, GI105990541, Length=222, Percent_Identity=27.027027027027, Blast_Score=76, Evalue=8e-14,
Organism=Homo sapiens, GI73747915, Length=217, Percent_Identity=28.110599078341, Blast_Score=67, Evalue=3e-11,
Organism=Escherichia coli, GI1787041, Length=537, Percent_Identity=44.5065176908752, Blast_Score=496, Evalue=1e-141,
Organism=Escherichia coli, GI1789751, Length=541, Percent_Identity=29.2051756007394, Blast_Score=242, Evalue=5e-65,
Organism=Escherichia coli, GI2367384, Length=520, Percent_Identity=31.1538461538462, Blast_Score=221, Evalue=8e-59,
Organism=Escherichia coli, GI1787182, Length=537, Percent_Identity=28.8640595903166, Blast_Score=213, Evalue=4e-56,
Organism=Escherichia coli, GI1788225, Length=243, Percent_Identity=23.8683127572016, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1788165, Length=204, Percent_Identity=26.4705882352941, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI87081791, Length=236, Percent_Identity=24.5762711864407, Blast_Score=65, Evalue=9e-12,
Organism=Escherichia coli, GI1786703, Length=203, Percent_Identity=30.0492610837438, Blast_Score=64, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17555318, Length=534, Percent_Identity=28.0898876404494, Blast_Score=207, Evalue=1e-53,
Organism=Caenorhabditis elegans, GI17553372, Length=544, Percent_Identity=29.5955882352941, Blast_Score=205, Evalue=5e-53,
Organism=Caenorhabditis elegans, GI17559834, Length=544, Percent_Identity=24.2647058823529, Blast_Score=188, Evalue=5e-48,
Organism=Caenorhabditis elegans, GI17565938, Length=211, Percent_Identity=25.5924170616114, Blast_Score=70, Evalue=4e-12,
Organism=Saccharomyces cerevisiae, GI6320874, Length=529, Percent_Identity=31.758034026465, Blast_Score=220, Evalue=4e-58,
Organism=Saccharomyces cerevisiae, GI6321121, Length=562, Percent_Identity=28.1138790035587, Blast_Score=199, Evalue=1e-51,
Organism=Saccharomyces cerevisiae, GI6325030, Length=233, Percent_Identity=29.1845493562232, Blast_Score=101, Evalue=3e-22,
Organism=Saccharomyces cerevisiae, GI6324314, Length=240, Percent_Identity=28.3333333333333, Blast_Score=87, Evalue=6e-18,
Organism=Saccharomyces cerevisiae, GI6323278, Length=237, Percent_Identity=27.4261603375527, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24666836, Length=538, Percent_Identity=29.182156133829, Blast_Score=224, Evalue=8e-59,
Organism=Drosophila melanogaster, GI24642252, Length=549, Percent_Identity=28.9617486338798, Blast_Score=223, Evalue=2e-58,
Organism=Drosophila melanogaster, GI18859989, Length=549, Percent_Identity=28.9617486338798, Blast_Score=223, Evalue=2e-58,
Organism=Drosophila melanogaster, GI24641342, Length=543, Percent_Identity=26.7034990791897, Blast_Score=189, Evalue=5e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 61519; Mature: 61519

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTVSDISLQFSDRKLFDEVNIKFTPGNCYGLIGANGAGKSTFLKILDGEIQPTTGHISM
CEEEEEEEEEECCCHHHEECEEEECCCCEEEEEECCCCCHHHHHHEECCCCCCCCCEEEC
GPNERMSVLRQNHYDYEDQTPLDVVMMGNEKLFAINQEKNAIYMNPDATDDDFMKAAELE
CCHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEEEECCCCEEEECCCCCCHHHHHHHHHH
AEFGEMGGYEAEADAARLLQNLGIKAEQHTDLMANLTSGEHVKVLLAKALFGKPDVLLLD
HHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHCCCCCCHHHHHHHHHHCCCCCEEEEE
EPTNGLDIQAIAWLEDFLINFENTVIVVSHDRHFLNNVCTYMADLDYGKIKLYPGNYDFW
CCCCCCCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCHHH
KESSELALRLQGDQNRKAEEKIAELKEFIARFSANASKSKQATSRKKMLDKIEVEEFVPS
CCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC
SRKYPFVGFEQEREIGNDLLRVENLSVAIDEEMIIENISFILNPGDKTVFIGQNDIQQTT
CCCCCCCCCHHHHHHHHHHEEEECCEEEECHHHHHHCHHEEECCCCCEEEECCCCHHHHH
LLRALMDDVEDNWTVTGDIKWGVTSSRSYLPKDNSKDFDSNEPILDWLRQFVLTKEEDDN
HHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC
TYLRGFLGRMLFKGEESLKAVNVLSGGEKVRVMLSKMMLQRANVLVLDDPTNHLDLESIS
HHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHH
ALNDGLKSFKGSILFASHDHEFINTIANHIVVLGKSGVIDRIGETYDDFLDNAEVQEKVK
HHHHHHHHHCCCEEEEECCHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHCCHHHHHHHH
ELWAD
HHHCC
>Mature Secondary Structure
MLTVSDISLQFSDRKLFDEVNIKFTPGNCYGLIGANGAGKSTFLKILDGEIQPTTGHISM
CEEEEEEEEEECCCHHHEECEEEECCCCEEEEEECCCCCHHHHHHEECCCCCCCCCEEEC
GPNERMSVLRQNHYDYEDQTPLDVVMMGNEKLFAINQEKNAIYMNPDATDDDFMKAAELE
CCHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEEEECCCCEEEECCCCCCHHHHHHHHHH
AEFGEMGGYEAEADAARLLQNLGIKAEQHTDLMANLTSGEHVKVLLAKALFGKPDVLLLD
HHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHCCCCCCHHHHHHHHHHCCCCCEEEEE
EPTNGLDIQAIAWLEDFLINFENTVIVVSHDRHFLNNVCTYMADLDYGKIKLYPGNYDFW
CCCCCCCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCHHH
KESSELALRLQGDQNRKAEEKIAELKEFIARFSANASKSKQATSRKKMLDKIEVEEFVPS
CCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC
SRKYPFVGFEQEREIGNDLLRVENLSVAIDEEMIIENISFILNPGDKTVFIGQNDIQQTT
CCCCCCCCCHHHHHHHHHHEEEECCEEEECHHHHHHCHHEEECCCCCEEEECCCCHHHHH
LLRALMDDVEDNWTVTGDIKWGVTSSRSYLPKDNSKDFDSNEPILDWLRQFVLTKEEDDN
HHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC
TYLRGFLGRMLFKGEESLKAVNVLSGGEKVRVMLSKMMLQRANVLVLDDPTNHLDLESIS
HHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHH
ALNDGLKSFKGSILFASHDHEFINTIANHIVVLGKSGVIDRIGETYDDFLDNAEVQEKVK
HHHHHHHHHCCCEEEEECCHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHCCHHHHHHHH
ELWAD
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]