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The map label for this gene is recO [H]

Identifier: 125622947

GI number: 125622947

Start: 62146

End: 62901

Strand: Direct

Name: recO [H]

Synonym: llmg_0067

Alternate gene names: 125622947

Gene position: 62146-62901 (Clockwise)

Preceding gene: 125622946

Following gene: 125622948

Centisome position: 2.46

GC content: 32.8

Gene sequence:

>756_bases
ATGCGTGATGCCGAAACTCAAGGTTTAGTACTTTATAGTCGTAATTACAAAGAAAAAGATAAATTGGTCAAGATTTTTAC
AGAGTCTTTTGGTAAGCGGATGTTTTTTGTCAAAAATTTTGGAAAATCTCCTTATGCCAGTTCCTTACAAGCTTTTACTG
ATGGAAAATTGACGGCAACAATTAATGACGGAGGATTTTCTTTTATCGAAGATGTCAGTGAAGTCGTTGTTTATAAAAAT
ATTAGTGCAGATATTTTCATCAATGCTCATGCCTCTTATATCATAAGTTTAGCCGATGCAGCCATTTCTGATAATCAATA
CGACCCAGCACTTTATGGATTTCTAAAGCGAAGTTTGGAACTTTTAGACCAAGGATTTGATATGGAAGTCGTGACTAATA
TTTTTGAATTACAAGTTCTTCATCGTTTTGGGGTTTCATTGAACTTTTCAGAATGTGCTTTTTGTCATAAAACAGTAGGA
CCATTTGATTTTTCATATAAATTTAGTGGCTGCCTTTGTCCAAGGCATTTCGATGAAGATTTGCGAAGAAGTCATCTTGA
CCCTAACGTGATTTATTTAATCAATCTCTTCCAAGAAATTTCTTTAGATGAATTAAAGAAAATTTCGATAAAAGCAGAAA
TGAAAGCGAAAATTCGTCAATTTATTGATGGACTTTATGATGAATATGTTGGGATTCATTTAAAATCCAAAAAATTCTTG
GACGGAATGTCTGGTTGGGCAGATATTATGAAATAA

Upstream 100 bases:

>100_bases
TGAGAAATCTGTCAGTAAAATTAAAATCACTGATGGCAATTGCAAGAGTTGTCAGTGATTTTTTTGATATAATGAAGTAA
CTTATTGAAAGGGGAAAATC

Downstream 100 bases:

>100_bases
ACCTGTGGATAAGTCGCTGGAAGTTCTGTCAGTAAATTTATCCACAGTGGAAAACTTAAAATTACTGACAGAAACCTCTA
AATATTTCTGTCAGTAAAAA

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O [H]

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MRDAETQGLVLYSRNYKEKDKLVKIFTESFGKRMFFVKNFGKSPYASSLQAFTDGKLTATINDGGFSFIEDVSEVVVYKN
ISADIFINAHASYIISLADAAISDNQYDPALYGFLKRSLELLDQGFDMEVVTNIFELQVLHRFGVSLNFSECAFCHKTVG
PFDFSYKFSGCLCPRHFDEDLRRSHLDPNVIYLINLFQEISLDELKKISIKAEMKAKIRQFIDGLYDEYVGIHLKSKKFL
DGMSGWADIMK

Sequences:

>Translated_251_residues
MRDAETQGLVLYSRNYKEKDKLVKIFTESFGKRMFFVKNFGKSPYASSLQAFTDGKLTATINDGGFSFIEDVSEVVVYKN
ISADIFINAHASYIISLADAAISDNQYDPALYGFLKRSLELLDQGFDMEVVTNIFELQVLHRFGVSLNFSECAFCHKTVG
PFDFSYKFSGCLCPRHFDEDLRRSHLDPNVIYLINLFQEISLDELKKISIKAEMKAKIRQFIDGLYDEYVGIHLKSKKFL
DGMSGWADIMK
>Mature_251_residues
MRDAETQGLVLYSRNYKEKDKLVKIFTESFGKRMFFVKNFGKSPYASSLQAFTDGKLTATINDGGFSFIEDVSEVVVYKN
ISADIFINAHASYIISLADAAISDNQYDPALYGFLKRSLELLDQGFDMEVVTNIFELQVLHRFGVSLNFSECAFCHKTVG
PFDFSYKFSGCLCPRHFDEDLRRSHLDPNVIYLINLFQEISLDELKKISIKAEMKAKIRQFIDGLYDEYVGIHLKSKKFL
DGMSGWADIMK

Specific function: Involved in DNA repair and recF pathway recombination [H]

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717 [H]

Pfam domain/function: PF02565 RecO; PF11967 RecO_N [H]

EC number: NA

Molecular weight: Translated: 28702; Mature: 28702

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDAETQGLVLYSRNYKEKDKLVKIFTESFGKRMFFVKNFGKSPYASSLQAFTDGKLTAT
CCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCEEEEEHHCCCCCCHHHHHHHCCCEEEEE
INDGGFSFIEDVSEVVVYKNISADIFINAHASYIISLADAAISDNQYDPALYGFLKRSLE
EECCCHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
LLDQGFDMEVVTNIFELQVLHRFGVSLNFSECAFCHKTVGPFDFSYKFSGCLCPRHFDED
HHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCEEECCEECCCHHHHH
LRRSHLDPNVIYLINLFQEISLDELKKISIKAEMKAKIRQFIDGLYDEYVGIHLKSKKFL
HHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCHHHH
DGMSGWADIMK
HHHHHHHHHCC
>Mature Secondary Structure
MRDAETQGLVLYSRNYKEKDKLVKIFTESFGKRMFFVKNFGKSPYASSLQAFTDGKLTAT
CCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCEEEEEHHCCCCCCHHHHHHHCCCEEEEE
INDGGFSFIEDVSEVVVYKNISADIFINAHASYIISLADAAISDNQYDPALYGFLKRSLE
EECCCHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
LLDQGFDMEVVTNIFELQVLHRFGVSLNFSECAFCHKTVGPFDFSYKFSGCLCPRHFDED
HHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCEEECCEECCCHHHHH
LRRSHLDPNVIYLINLFQEISLDELKKISIKAEMKAKIRQFIDGLYDEYVGIHLKSKKFL
HHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCHHHH
DGMSGWADIMK
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]