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The map label for this gene is araT [H]

Identifier: 125622946

GI number: 125622946

Start: 60873

End: 62048

Strand: Direct

Name: araT [H]

Synonym: llmg_0066

Alternate gene names: 125622946

Gene position: 60873-62048 (Clockwise)

Preceding gene: 125622945

Following gene: 125622947

Centisome position: 2.41

GC content: 38.1

Gene sequence:

>1176_bases
ATGGATTTATTAAAAAAATTTAACCCTAATTTAGATAAAATTGAAATTTCACTCATTCGTCAATTTGACCAACAGGTTTC
ATCTATCCCTGATATTATCAAGTTGACGTTGGGAGAGCCTGATTTTTATACACCTGAACATGTCAAGCAAGCAGGAATTG
CGGCGATTGAAAATAATCAAAGTCATTATACTGGAATGGCTGGTTTATTAGAATTACGTCAGGCTGCTAGTGAATTTTTG
TTAAAAAAATATGGTTTATCTTATGCTGCTGAGGATGAAATATTAGTCACTGTTGGAGTGACCGAAGCGATTTCTAGTGT
TTTGCTGTCAATTTTAGTTGCGGGTGATGAGGTTTTGATTCCAGCCCCTGCATACCCTGGCTATGAGCCTTTAATTACGC
TTGCTGGCGGTTCTTTGGTTGAAATTGATACCAGAGCTAACGATTTTGTTTTAACGCCTGAGATGCTTGATCAAGCGATT
ATTGAGCGTGAGGGAAAAGTTAAAGCTGTTATTTTGAATTACCCCGCAAATCCTACAGGAGTAACTTATAATCGTGAACA
AATCAAGGATTTAGCTGAGGTTTTGAAAAAGCATGAAGTTTTTGTAATTGCTGACGAGGTTTATTCTGAATTAAATTATA
CTGACCAACCGCATGTGTCAATTGCTGAATATGCCCCTGAGCAAACGATTGTTCTTAATGGTTTATCAAAGTCACATGCG
ATGACCGGTTGGCGAATTGGATTAATCTTTGCGGCGCGTGAATTAGTGGCACAGATTATTAAGACGCACCAATATTTGGT
GACTTCGGCTTCCACTCAGTCTCAATTTGCTGCAATTGAAGCTTTGAAAAATGGAGCTGATGATGCCCTTCCGATGAAAA
AAGAATATCTTAAACGTCGTGATTATATTATTGAAAAAATGTCAGCTCTTGGGTTTAAAATTATTGAACCAGATGGAGCT
TTCTACATTTTTGCAAAAATTCCAGCTGATTTGGAGCAAGATTCATTCAAGTTTGCGGTTGATTTTGCAAAAGAAAATGC
AGTTGCCATTATTCCCGGTATTGCTTTTGGTCAGTACGGTGAGGGATTTGTCCGCTTGTCTTATGCGGCTTCAATGGATG
TCATTGAGCAGGCAATGGCAAGGTTAACAGATTATGTAACTAAAAAACGTGGCTGA

Upstream 100 bases:

>100_bases
GCTGACAGGTTTGTCAGTAAAGTAAATAGTCTGAAAATAGTGTATAATATTGTCAAAAGATTTCTGTCAGTAGAACAGGA
TGGTAAGTAGAGGATGTTTT

Downstream 100 bases:

>100_bases
GAAATCTGTCAGTAAAATTAAAATCACTGATGGCAATTGCAAGAGTTGTCAGTGATTTTTTTGATATAATGAAGTAACTT
ATTGAAAGGGGAAAATCATG

Product: aromatic amino acid aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 391

Protein sequence:

>391_residues
MDLLKKFNPNLDKIEISLIRQFDQQVSSIPDIIKLTLGEPDFYTPEHVKQAGIAAIENNQSHYTGMAGLLELRQAASEFL
LKKYGLSYAAEDEILVTVGVTEAISSVLLSILVAGDEVLIPAPAYPGYEPLITLAGGSLVEIDTRANDFVLTPEMLDQAI
IEREGKVKAVILNYPANPTGVTYNREQIKDLAEVLKKHEVFVIADEVYSELNYTDQPHVSIAEYAPEQTIVLNGLSKSHA
MTGWRIGLIFAARELVAQIIKTHQYLVTSASTQSQFAAIEALKNGADDALPMKKEYLKRRDYIIEKMSALGFKIIEPDGA
FYIFAKIPADLEQDSFKFAVDFAKENAVAIIPGIAFGQYGEGFVRLSYAASMDVIEQAMARLTDYVTKKRG

Sequences:

>Translated_391_residues
MDLLKKFNPNLDKIEISLIRQFDQQVSSIPDIIKLTLGEPDFYTPEHVKQAGIAAIENNQSHYTGMAGLLELRQAASEFL
LKKYGLSYAAEDEILVTVGVTEAISSVLLSILVAGDEVLIPAPAYPGYEPLITLAGGSLVEIDTRANDFVLTPEMLDQAI
IEREGKVKAVILNYPANPTGVTYNREQIKDLAEVLKKHEVFVIADEVYSELNYTDQPHVSIAEYAPEQTIVLNGLSKSHA
MTGWRIGLIFAARELVAQIIKTHQYLVTSASTQSQFAAIEALKNGADDALPMKKEYLKRRDYIIEKMSALGFKIIEPDGA
FYIFAKIPADLEQDSFKFAVDFAKENAVAIIPGIAFGQYGEGFVRLSYAASMDVIEQAMARLTDYVTKKRG
>Mature_391_residues
MDLLKKFNPNLDKIEISLIRQFDQQVSSIPDIIKLTLGEPDFYTPEHVKQAGIAAIENNQSHYTGMAGLLELRQAASEFL
LKKYGLSYAAEDEILVTVGVTEAISSVLLSILVAGDEVLIPAPAYPGYEPLITLAGGSLVEIDTRANDFVLTPEMLDQAI
IEREGKVKAVILNYPANPTGVTYNREQIKDLAEVLKKHEVFVIADEVYSELNYTDQPHVSIAEYAPEQTIVLNGLSKSHA
MTGWRIGLIFAARELVAQIIKTHQYLVTSASTQSQFAAIEALKNGADDALPMKKEYLKRRDYIIEKMSALGFKIIEPDGA
FYIFAKIPADLEQDSFKFAVDFAKENAVAIIPGIAFGQYGEGFVRLSYAASMDVIEQAMARLTDYVTKKRG

Specific function: Unknown

COG id: COG0436

COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI56713256, Length=395, Percent_Identity=29.873417721519, Blast_Score=157, Evalue=2e-38,
Organism=Homo sapiens, GI56713254, Length=395, Percent_Identity=29.873417721519, Blast_Score=157, Evalue=2e-38,
Organism=Homo sapiens, GI95147551, Length=340, Percent_Identity=26.7647058823529, Blast_Score=133, Evalue=3e-31,
Organism=Homo sapiens, GI169881279, Length=340, Percent_Identity=26.7647058823529, Blast_Score=133, Evalue=3e-31,
Organism=Homo sapiens, GI169881281, Length=230, Percent_Identity=26.9565217391304, Blast_Score=105, Evalue=7e-23,
Organism=Homo sapiens, GI187936925, Length=367, Percent_Identity=25.8855585831063, Blast_Score=88, Evalue=1e-17,
Organism=Homo sapiens, GI14211921, Length=367, Percent_Identity=25.8855585831063, Blast_Score=88, Evalue=1e-17,
Organism=Homo sapiens, GI4507369, Length=417, Percent_Identity=24.7002398081535, Blast_Score=82, Evalue=7e-16,
Organism=Homo sapiens, GI149944424, Length=372, Percent_Identity=22.8494623655914, Blast_Score=75, Evalue=8e-14,
Organism=Escherichia coli, GI1788722, Length=354, Percent_Identity=30.225988700565, Blast_Score=171, Evalue=7e-44,
Organism=Escherichia coli, GI1786816, Length=354, Percent_Identity=28.2485875706215, Blast_Score=171, Evalue=9e-44,
Organism=Escherichia coli, GI1788627, Length=373, Percent_Identity=26.5415549597855, Blast_Score=125, Evalue=5e-30,
Organism=Escherichia coli, GI1787909, Length=381, Percent_Identity=26.7716535433071, Blast_Score=89, Evalue=5e-19,
Organism=Escherichia coli, GI1787710, Length=338, Percent_Identity=25.7396449704142, Blast_Score=65, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI71994472, Length=337, Percent_Identity=29.080118694362, Blast_Score=133, Evalue=1e-31,
Organism=Caenorhabditis elegans, GI71994476, Length=337, Percent_Identity=29.080118694362, Blast_Score=133, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI17567369, Length=379, Percent_Identity=27.7044854881267, Blast_Score=123, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI17567663, Length=373, Percent_Identity=23.0563002680965, Blast_Score=107, Evalue=1e-23,
Organism=Saccharomyces cerevisiae, GI6322401, Length=345, Percent_Identity=29.8550724637681, Blast_Score=135, Evalue=1e-32,
Organism=Saccharomyces cerevisiae, GI6320317, Length=354, Percent_Identity=23.4463276836158, Blast_Score=77, Evalue=5e-15,
Organism=Saccharomyces cerevisiae, GI6323118, Length=347, Percent_Identity=25.6484149855908, Blast_Score=74, Evalue=5e-14,
Organism=Drosophila melanogaster, GI28573069, Length=386, Percent_Identity=28.7564766839378, Blast_Score=141, Evalue=6e-34,
Organism=Drosophila melanogaster, GI24646114, Length=386, Percent_Identity=28.7564766839378, Blast_Score=141, Evalue=6e-34,
Organism=Drosophila melanogaster, GI28573067, Length=386, Percent_Identity=28.7564766839378, Blast_Score=141, Evalue=6e-34,
Organism=Drosophila melanogaster, GI28573065, Length=386, Percent_Identity=28.7564766839378, Blast_Score=141, Evalue=6e-34,
Organism=Drosophila melanogaster, GI18859735, Length=392, Percent_Identity=21.4285714285714, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI45551451, Length=374, Percent_Identity=25.9358288770053, Blast_Score=83, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24641770, Length=374, Percent_Identity=25.9358288770053, Blast_Score=83, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24641760, Length=374, Percent_Identity=25.9358288770053, Blast_Score=83, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24641768, Length=374, Percent_Identity=25.9358288770053, Blast_Score=83, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24641766, Length=374, Percent_Identity=25.9358288770053, Blast_Score=83, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24641764, Length=374, Percent_Identity=25.9358288770053, Blast_Score=83, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001176
- InterPro:   IPR004839
- InterPro:   IPR004838
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: 2.6.1.-

Molecular weight: Translated: 43220; Mature: 43220

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: PS00105 AA_TRANSFER_CLASS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLLKKFNPNLDKIEISLIRQFDQQVSSIPDIIKLTLGEPDFYTPEHVKQAGIAAIENNQ
CCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHCCEEEECCC
SHYTGMAGLLELRQAASEFLLKKYGLSYAAEDEILVTVGVTEAISSVLLSILVAGDEVLI
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHHCCCCEEE
PAPAYPGYEPLITLAGGSLVEIDTRANDFVLTPEMLDQAIIEREGKVKAVILNYPANPTG
ECCCCCCCCCEEEECCCCEEEEECCCCCEEECHHHHHHHHHHCCCCEEEEEEECCCCCCC
VTYNREQIKDLAEVLKKHEVFVIADEVYSELNYTDQPHVSIAEYAPEQTIVLNGLSKSHA
CCCCHHHHHHHHHHHHHCCEEEEEHHHHHHCCCCCCCCEEHHHHCCCCEEEEECCCCHHC
MTGWRIGLIFAARELVAQIIKTHQYLVTSASTQSQFAAIEALKNGADDALPMKKEYLKRR
CCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHH
DYIIEKMSALGFKIIEPDGAFYIFAKIPADLEQDSFKFAVDFAKENAVAIIPGIAFGQYG
HHHHHHHHHCCEEEECCCCCEEEEEECCCCCCCCCEEEEEEECCCCCEEEECCCCCCCCC
EGFVRLSYAASMDVIEQAMARLTDYVTKKRG
CCEEEEEHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDLLKKFNPNLDKIEISLIRQFDQQVSSIPDIIKLTLGEPDFYTPEHVKQAGIAAIENNQ
CCCHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHCCEEEECCC
SHYTGMAGLLELRQAASEFLLKKYGLSYAAEDEILVTVGVTEAISSVLLSILVAGDEVLI
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHHCCCCEEE
PAPAYPGYEPLITLAGGSLVEIDTRANDFVLTPEMLDQAIIEREGKVKAVILNYPANPTG
ECCCCCCCCCEEEECCCCEEEEECCCCCEEECHHHHHHHHHHCCCCEEEEEEECCCCCCC
VTYNREQIKDLAEVLKKHEVFVIADEVYSELNYTDQPHVSIAEYAPEQTIVLNGLSKSHA
CCCCHHHHHHHHHHHHHCCEEEEEHHHHHHCCCCCCCCEEHHHHCCCCEEEEECCCCHHC
MTGWRIGLIFAARELVAQIIKTHQYLVTSASTQSQFAAIEALKNGADDALPMKKEYLKRR
CCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHH
DYIIEKMSALGFKIIEPDGAFYIFAKIPADLEQDSFKFAVDFAKENAVAIIPGIAFGQYG
HHHHHHHHHCCEEEECCCCCEEEEEECCCCCCCCCEEEEEEECCCCCEEEECCCCCCCCC
EGFVRLSYAASMDVIEQAMARLTDYVTKKRG
CCEEEEEHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: Pyridoxal Phosphate. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 2104615 [H]