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The map label for this gene is ps101 [H]

Identifier: 125622936

GI number: 125622936

Start: 50463

End: 51647

Strand: Direct

Name: ps101 [H]

Synonym: llmg_0055

Alternate gene names: 125622936

Gene position: 50463-51647 (Clockwise)

Preceding gene: 125622935

Following gene: 125622938

Centisome position: 1.99

GC content: 36.71

Gene sequence:

>1185_bases
ATGAATATTAAAGAATATACAAAAAAAGACGGTACAAAGGTGTACCGCGCTAATGTTTATCTGGGGGTTGATTCTCTAAC
TGGTAAGCAAGTGAGAAAAGTTATAACGGCTAAATCTGAAAAGATGTGTAATACAAAAATAAGTAGAGCTATTAATGAGT
TTGAAAAGAACGGCCAAACAGTCAGAAAAGTAAGTGTAGATGATTTTAAAGATATTGCCATGCTGTGGTTTGATAGTTAT
AAGCTAGGGGTAAAACCTCGAACAGTTCAAATCATGCAGACACGCTTAAATAATTATGTTTTGCCAGCTCTTGGAGAGTA
TAGAATAGATAAAGTAAATTCTATTATTCTTCAGCAAATTGTTAATCAATGGATGATTAATGCTAGTCAACCATTAAATG
GGGCTTACCACAGACCAAAAGGAAAAGGCAAAGACTTCAAAATATACTTTAATATCGTTGAGCGTATTTTTAAGCATGCC
TTATCTCTTGGGCTAGTTAAAGATAACCCTTGTGTTAATGTTATTGTACCAAAAGTAAGACTTGAAAGCACCGAAAAGAA
AGTAAAATATCTTACAGCGGAGCAACTGAAAATATTTTTTGAGTATATTGGAGCACTACCCAAAGAGAAATATACTAATG
AGCTGATGACTGGACTTTGTCGTTTGCTTGTTGCCTCCGGTTTGCGTATTGGGGAAGCTGTGGCCTTGTCATGGTCTGAT
ATTGACTTTAAGACAGGTTCTGTGTCTGTCAGTAAAACAACGCTTAGAGCGGTCATACAATCAACCCCAAAGACTGACAA
AAGTAATAGGATTGTTTTAATAGACAGCAAAGCAGTAGAAGTTTTAAAGCATTGGGAACTATTTCAAGCGAAATACTTCA
TGAGTATTGGAAAGGGAAAGCAAGAACTGGTATTTCCCAACCGAACAGGAGGGGTGTTGGACTATCAGACAATGAGGCCA
TTCTTAATAAAATGGTTGAGAGCCTGCCAGCTACCACAAGTTGGCTTTCATGGTTTTAGACATTCTCATGCTAGCCTTCT
ACTTAATGCTGATGTTCCCTATAAAGAGATACAAGAACGCTTAGGACACGCAAGCATAAAAATGACTATGGACACATACA
GCCACCTTGAATCTGACAATAAAATAAAAGCAGTTGAACGCTTTGAATCAATTGCAAATTTCTAG

Upstream 100 bases:

>100_bases
ACTAATAAACCAGTTAACTAAATATCTCTAATAAAAATATTTCTCAATCCTCGTACATGCCTTGCCTGACATTAGTACAA
AATGGAAAGGAAGAAATAAT

Downstream 100 bases:

>100_bases
TAAAAAAATGCTACTCGTAATAAATCTCGTAATAAATTTAGCTTTTTTAAAAAACAAAATCTCTACAACGTAGATATACC
AGTATTTAACGAGGTTTTTC

Product: phage integrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MNIKEYTKKDGTKVYRANVYLGVDSLTGKQVRKVITAKSEKMCNTKISRAINEFEKNGQTVRKVSVDDFKDIAMLWFDSY
KLGVKPRTVQIMQTRLNNYVLPALGEYRIDKVNSIILQQIVNQWMINASQPLNGAYHRPKGKGKDFKIYFNIVERIFKHA
LSLGLVKDNPCVNVIVPKVRLESTEKKVKYLTAEQLKIFFEYIGALPKEKYTNELMTGLCRLLVASGLRIGEAVALSWSD
IDFKTGSVSVSKTTLRAVIQSTPKTDKSNRIVLIDSKAVEVLKHWELFQAKYFMSIGKGKQELVFPNRTGGVLDYQTMRP
FLIKWLRACQLPQVGFHGFRHSHASLLLNADVPYKEIQERLGHASIKMTMDTYSHLESDNKIKAVERFESIANF

Sequences:

>Translated_394_residues
MNIKEYTKKDGTKVYRANVYLGVDSLTGKQVRKVITAKSEKMCNTKISRAINEFEKNGQTVRKVSVDDFKDIAMLWFDSY
KLGVKPRTVQIMQTRLNNYVLPALGEYRIDKVNSIILQQIVNQWMINASQPLNGAYHRPKGKGKDFKIYFNIVERIFKHA
LSLGLVKDNPCVNVIVPKVRLESTEKKVKYLTAEQLKIFFEYIGALPKEKYTNELMTGLCRLLVASGLRIGEAVALSWSD
IDFKTGSVSVSKTTLRAVIQSTPKTDKSNRIVLIDSKAVEVLKHWELFQAKYFMSIGKGKQELVFPNRTGGVLDYQTMRP
FLIKWLRACQLPQVGFHGFRHSHASLLLNADVPYKEIQERLGHASIKMTMDTYSHLESDNKIKAVERFESIANF
>Mature_394_residues
MNIKEYTKKDGTKVYRANVYLGVDSLTGKQVRKVITAKSEKMCNTKISRAINEFEKNGQTVRKVSVDDFKDIAMLWFDSY
KLGVKPRTVQIMQTRLNNYVLPALGEYRIDKVNSIILQQIVNQWMINASQPLNGAYHRPKGKGKDFKIYFNIVERIFKHA
LSLGLVKDNPCVNVIVPKVRLESTEKKVKYLTAEQLKIFFEYIGALPKEKYTNELMTGLCRLLVASGLRIGEAVALSWSD
IDFKTGSVSVSKTTLRAVIQSTPKTDKSNRIVLIDSKAVEVLKHWELFQAKYFMSIGKGKQELVFPNRTGGVLDYQTMRP
FLIKWLRACQLPQVGFHGFRHSHASLLLNADVPYKEIQERLGHASIKMTMDTYSHLESDNKIKAVERFESIANF

Specific function: Putative integrase that is involved in the insertion of the integrative and conjugative element ICEBs1. Required for the excision of ICEBs1 from the donor cell genome and subsequent integration in the recipient cell genome. Appears not to be transferred t

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 45026; Mature: 45026

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIKEYTKKDGTKVYRANVYLGVDSLTGKQVRKVITAKSEKMCNTKISRAINEFEKNGQT
CCCHHHHCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
VRKVSVDDFKDIAMLWFDSYKLGVKPRTVQIMQTRLNNYVLPALGEYRIDKVNSIILQQI
EEEECHHHHHHHHHHHHHCEECCCCCHHHHHHHHHHCCEECCCCCCHHHHHHHHHHHHHH
VNQWMINASQPLNGAYHRPKGKGKDFKIYFNIVERIFKHALSLGLVKDNPCVNVIVPKVR
HHHHHCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCEEEEECCEE
LESTEKKVKYLTAEQLKIFFEYIGALPKEKYTNELMTGLCRLLVASGLRIGEAVALSWSD
CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECC
IDFKTGSVSVSKTTLRAVIQSTPKTDKSNRIVLIDSKAVEVLKHWELFQAKYFMSIGKGK
CCCCCCCEEEHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCC
QELVFPNRTGGVLDYQTMRPFLIKWLRACQLPQVGFHGFRHSHASLLLNADVPYKEIQER
CEEECCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCEEEEECCCCHHHHHHH
LGHASIKMTMDTYSHLESDNKIKAVERFESIANF
HCCCEEEEEHHHHHHCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MNIKEYTKKDGTKVYRANVYLGVDSLTGKQVRKVITAKSEKMCNTKISRAINEFEKNGQT
CCCHHHHCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
VRKVSVDDFKDIAMLWFDSYKLGVKPRTVQIMQTRLNNYVLPALGEYRIDKVNSIILQQI
EEEECHHHHHHHHHHHHHCEECCCCCHHHHHHHHHHCCEECCCCCCHHHHHHHHHHHHHH
VNQWMINASQPLNGAYHRPKGKGKDFKIYFNIVERIFKHALSLGLVKDNPCVNVIVPKVR
HHHHHCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCEEEEECCEE
LESTEKKVKYLTAEQLKIFFEYIGALPKEKYTNELMTGLCRLLVASGLRIGEAVALSWSD
CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECC
IDFKTGSVSVSKTTLRAVIQSTPKTDKSNRIVLIDSKAVEVLKHWELFQAKYFMSIGKGK
CCCCCCCEEEHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCC
QELVFPNRTGGVLDYQTMRPFLIKWLRACQLPQVGFHGFRHSHASLLLNADVPYKEIQER
CEEECCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCEEEEECCCCHHHHHHH
LGHASIKMTMDTYSHLESDNKIKAVERFESIANF
HCCCEEEEEHHHHHHCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]