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The map label for this gene is ps126

Identifier: 125622911

GI number: 125622911

Start: 35242

End: 36870

Strand: Reverse

Name: ps126

Synonym: llmg_0030

Alternate gene names: NA

Gene position: 36870-35242 (Counterclockwise)

Preceding gene: 125622912

Following gene: 125622910

Centisome position: 1.46

GC content: 40.33

Gene sequence:

>1629_bases
ATGACAGACCAATTAGAAAAACTTGTGGCAGAAACGCCACAGGAAAACGTAAGAAGTCCGAAACCTAAAATAGAGGACTT
CACAGATTATGGCGAAGACGGTAAGAGAGTCGTTAATGTCGCAGGTTATCAGGAATGCTTAAAAGACTGGCTGGAACAAG
AAAAAGAAATCATCAATAGCCCTGACTATGTCAAAGCACATACTCAAACGCTTAGAGCGGTTAGAAAACTATTCTTTGAA
CACCGTAACTTATTTTTAAGCACACCTAAGGAAGACGGCAACGCACCCAAGTCACTAAGCCCCTTAGATACGGCTAGAAT
CATCTATAAAACGCTAAAAGTCATCAAATTAGACCACCAAAGCGGACTGTTAGGCGTTTATAACCCTGAACTAGGCATAT
ATGAAACAAACGAAAATTTCTTTCATCGGCTCATTTATTGGCTAGAACCGTCATATAGTCAGGCACGGTCTAAAGAGGTT
CTCTTTAAACTTGAAACCTTAGCGGAGGTTAATCAACAAACCACAGAAGCTCATCTTATCCCAGTTGCGAACGGTATTTT
CAATAAGAAAACCCAGCAATTAGAGCCGTTTAGTCCCAAGTATGTCTTTACCTCAACCATTGCGACCAAGTACAACGACA
AAGCAAAAGTACCCAATATCAACGGTTGGAACGTAGACGGCTGGCTGTTAGACCTCATGAGTGGAGATAAGGAGCTTGTT
AGCCTTTTATGGCAGATTATTTCCGCAAGTACCAACGGCAATTACTCCTATCGTAAAGGCGCTTGGCTCGTCGGTAAAGG
AAATGACGGCAAAGGTACATTTCAGAGCCTCATCATGAACTTAATCGGACGTGAGAACGTGGCAAGTGTCAAAGCTGAAC
AATTTGCGGAACGGTTCGTCCTTTCCCAAGTCGTTGGCAAAACTTGTATTATTGGAGATGACAGCCAAGTCAGTTACTTA
GACAACGCAGGAAATTACTTTTCAGTAGTGACTGGCGACCCAGTACCGATTGAAGCGAAAGGAAAGCAACCCACCTTAGC
AGTATTTAATAAGCTGGTTATACAATCCACTAACTTCTTGCCAAAGTTTAGAAATAAGTCAAATGGAACATACAGACGTT
TGCTTATCGTGCCTTTTGAAAAGTCTTTTACCGCAGATAATGATGACTGGAAAATCAAAGATGATTATATTAAACGGACT
GACGTTTTAGAATATGTTCTTAAAATTGCTTTATCACTCAACTTTGATAAGTTTAACGAACCAAAAGCCACACAAGGGCT
GTTAGATGACTTTAAAATCAGCAATGACAATGTATTGGCTTTTGTAAATGATATGTTTGAGGAGTTCGTCAGTGATTTTC
TACCGACCGCCTTTATAAGCGCCTTATATCGTGCATGGTGTGAAGATGAGGGAGTGAAGCCCTTTACTAAGCGAGAGTTT
GAGAATAAACTACCTGATTATGTCAAAGACCAATGGAAAAAGACCGTGCAAAGACCAAATAGCGCAGGCTTTAATAGAGC
TGTCGATTTACATCGAGCCAATGAAATGGAATTGTTTAGACGGTTGTTTTATTGGGACGATGAGAAACATAAAAAAGTCA
CTAAAGGTTATTCCCGCAAGAAAAAATAA

Upstream 100 bases:

>100_bases
TTATTGCGAACCTTTAACAATCGAACCAGTCCGCCCTTACCTGATGACGAGCTGGAGACCATTTGGAAAAGTGTATTCAA
AATGAAATAGAAAGGAAGTC

Downstream 100 bases:

>100_bases
AAGTGTTACTGAAAATCGGTAACACGTTACTGTTAGAAGTAACAGCTTTAACCCTATGGTTAAGCCGTTTATAGGTATCT
GTTACTCTGTTACCGCAAAA

Product: putative DNA primase

Products: NA

Alternate protein names: Primase; Phage/Plasmid Primase P4 Family; P4 Family Phage/Plasmid Primase; Phage Primase; Phage/Plasmid Primase; Phage Replication Protein; Phage DNA Primase; Phage Associated Protein; Prophage Lp4 DNA Primase/Helicase; Phage DNA Primase-Like Protein; P4-Specific DNA Primase; RepA Protein; Prophage; Plasmid/Phage Primase; Nucleoside Triphosphatase D5 Family; DNA Primase Domain-Containing Protein; Replication Protein; Phage-Related DNA Primase; ATPase; Prophage Lsa1 DNA Primase; Phage DNA Polymerase; Phage-Related DNA Primase/Helicase; Phage Associated DNA Primase; Primase Superantigen-Encoding Pathogenicity Islands SaPI; Prophage DNA Primase; Nucleic Acid Independent Nucleoside Triphosphatase

Number of amino acids: Translated: 542; Mature: 541

Protein sequence:

>542_residues
MTDQLEKLVAETPQENVRSPKPKIEDFTDYGEDGKRVVNVAGYQECLKDWLEQEKEIINSPDYVKAHTQTLRAVRKLFFE
HRNLFLSTPKEDGNAPKSLSPLDTARIIYKTLKVIKLDHQSGLLGVYNPELGIYETNENFFHRLIYWLEPSYSQARSKEV
LFKLETLAEVNQQTTEAHLIPVANGIFNKKTQQLEPFSPKYVFTSTIATKYNDKAKVPNINGWNVDGWLLDLMSGDKELV
SLLWQIISASTNGNYSYRKGAWLVGKGNDGKGTFQSLIMNLIGRENVASVKAEQFAERFVLSQVVGKTCIIGDDSQVSYL
DNAGNYFSVVTGDPVPIEAKGKQPTLAVFNKLVIQSTNFLPKFRNKSNGTYRRLLIVPFEKSFTADNDDWKIKDDYIKRT
DVLEYVLKIALSLNFDKFNEPKATQGLLDDFKISNDNVLAFVNDMFEEFVSDFLPTAFISALYRAWCEDEGVKPFTKREF
ENKLPDYVKDQWKKTVQRPNSAGFNRAVDLHRANEMELFRRLFYWDDEKHKKVTKGYSRKKK

Sequences:

>Translated_542_residues
MTDQLEKLVAETPQENVRSPKPKIEDFTDYGEDGKRVVNVAGYQECLKDWLEQEKEIINSPDYVKAHTQTLRAVRKLFFE
HRNLFLSTPKEDGNAPKSLSPLDTARIIYKTLKVIKLDHQSGLLGVYNPELGIYETNENFFHRLIYWLEPSYSQARSKEV
LFKLETLAEVNQQTTEAHLIPVANGIFNKKTQQLEPFSPKYVFTSTIATKYNDKAKVPNINGWNVDGWLLDLMSGDKELV
SLLWQIISASTNGNYSYRKGAWLVGKGNDGKGTFQSLIMNLIGRENVASVKAEQFAERFVLSQVVGKTCIIGDDSQVSYL
DNAGNYFSVVTGDPVPIEAKGKQPTLAVFNKLVIQSTNFLPKFRNKSNGTYRRLLIVPFEKSFTADNDDWKIKDDYIKRT
DVLEYVLKIALSLNFDKFNEPKATQGLLDDFKISNDNVLAFVNDMFEEFVSDFLPTAFISALYRAWCEDEGVKPFTKREF
ENKLPDYVKDQWKKTVQRPNSAGFNRAVDLHRANEMELFRRLFYWDDEKHKKVTKGYSRKKK
>Mature_541_residues
TDQLEKLVAETPQENVRSPKPKIEDFTDYGEDGKRVVNVAGYQECLKDWLEQEKEIINSPDYVKAHTQTLRAVRKLFFEH
RNLFLSTPKEDGNAPKSLSPLDTARIIYKTLKVIKLDHQSGLLGVYNPELGIYETNENFFHRLIYWLEPSYSQARSKEVL
FKLETLAEVNQQTTEAHLIPVANGIFNKKTQQLEPFSPKYVFTSTIATKYNDKAKVPNINGWNVDGWLLDLMSGDKELVS
LLWQIISASTNGNYSYRKGAWLVGKGNDGKGTFQSLIMNLIGRENVASVKAEQFAERFVLSQVVGKTCIIGDDSQVSYLD
NAGNYFSVVTGDPVPIEAKGKQPTLAVFNKLVIQSTNFLPKFRNKSNGTYRRLLIVPFEKSFTADNDDWKIKDDYIKRTD
VLEYVLKIALSLNFDKFNEPKATQGLLDDFKISNDNVLAFVNDMFEEFVSDFLPTAFISALYRAWCEDEGVKPFTKREFE
NKLPDYVKDQWKKTVQRPNSAGFNRAVDLHRANEMELFRRLFYWDDEKHKKVTKGYSRKKK

Specific function: Unknown

COG id: COG3378

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62322; Mature: 62191

Theoretical pI: Translated: 8.58; Mature: 8.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDQLEKLVAETPQENVRSPKPKIEDFTDYGEDGKRVVNVAGYQECLKDWLEQEKEIINS
CCHHHHHHHHHCCHHHHCCCCCCCCHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCC
PDYVKAHTQTLRAVRKLFFEHRNLFLSTPKEDGNAPKSLSPLDTARIIYKTLKVIKLDHQ
CCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHEEECC
SGLLGVYNPELGIYETNENFFHRLIYWLEPSYSQARSKEVLFKLETLAEVNQQTTEAHLI
CCEEEEECCCCCEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
PVANGIFNKKTQQLEPFSPKYVFTSTIATKYNDKAKVPNINGWNVDGWLLDLMSGDKELV
ECCCCHHCCCHHCCCCCCCCEEEEEHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHH
SLLWQIISASTNGNYSYRKGAWLVGKGNDGKGTFQSLIMNLIGRENVASVKAEQFAERFV
HHHHHHHHCCCCCCCEECCCEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LSQVVGKTCIIGDDSQVSYLDNAGNYFSVVTGDPVPIEAKGKQPTLAVFNKLVIQSTNFL
HHHHHCCEEEECCCCCCCEECCCCCEEEEEECCCEEEECCCCCCHHHHHHHHHHHCCCCC
PKFRNKSNGTYRRLLIVPFEKSFTADNDDWKIKDDYIKRTDVLEYVLKIALSLNFDKFNE
CCCCCCCCCCEEEEEEEECCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHCCCCCCCC
PKATQGLLDDFKISNDNVLAFVNDMFEEFVSDFLPTAFISALYRAWCEDEGVKPFTKREF
CCHHHHHHHHCEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
ENKLPDYVKDQWKKTVQRPNSAGFNRAVDLHRANEMELFRRLFYWDDEKHKKVTKGYSRK
HHCCHHHHHHHHHHHHCCCCCCCCCCEEHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHCC
KK
CC
>Mature Secondary Structure 
TDQLEKLVAETPQENVRSPKPKIEDFTDYGEDGKRVVNVAGYQECLKDWLEQEKEIINS
CHHHHHHHHHCCHHHHCCCCCCCCHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCC
PDYVKAHTQTLRAVRKLFFEHRNLFLSTPKEDGNAPKSLSPLDTARIIYKTLKVIKLDHQ
CCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHEEECC
SGLLGVYNPELGIYETNENFFHRLIYWLEPSYSQARSKEVLFKLETLAEVNQQTTEAHLI
CCEEEEECCCCCEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
PVANGIFNKKTQQLEPFSPKYVFTSTIATKYNDKAKVPNINGWNVDGWLLDLMSGDKELV
ECCCCHHCCCHHCCCCCCCCEEEEEHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHH
SLLWQIISASTNGNYSYRKGAWLVGKGNDGKGTFQSLIMNLIGRENVASVKAEQFAERFV
HHHHHHHHCCCCCCCEECCCEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LSQVVGKTCIIGDDSQVSYLDNAGNYFSVVTGDPVPIEAKGKQPTLAVFNKLVIQSTNFL
HHHHHCCEEEECCCCCCCEECCCCCEEEEEECCCEEEECCCCCCHHHHHHHHHHHCCCCC
PKFRNKSNGTYRRLLIVPFEKSFTADNDDWKIKDDYIKRTDVLEYVLKIALSLNFDKFNE
CCCCCCCCCCEEEEEEEECCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHCCCCCCCC
PKATQGLLDDFKISNDNVLAFVNDMFEEFVSDFLPTAFISALYRAWCEDEGVKPFTKREF
CCHHHHHHHHCEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
ENKLPDYVKDQWKKTVQRPNSAGFNRAVDLHRANEMELFRRLFYWDDEKHKKVTKGYSRK
HHCCHHHHHHHHHHHHCCCCCCCCCCEEHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHCC
KK
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA