| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124486525
Identifier: 124486525
GI number: 124486525
Start: 1750134
End: 1751099
Strand: Reverse
Name: 124486525
Synonym: Mlab_1713
Alternate gene names: NA
Gene position: 1751099-1750134 (Counterclockwise)
Preceding gene: 124486527
Following gene: 124486524
Centisome position: 97.02
GC content: 51.86
Gene sequence:
>966_bases GTGGATCTGAAAAAATTATCAAACTCGGTTGTCTTTTGCTCGCTTCTGGTGCTTCTGGCATCCTGTTCGTATGCAATCCT TTCAACTATCGTAACGCTCGCCGTAATGAACGGTTTTGGAATCCCGGTCGTTCTGGTCGGTAAATTCTTCTACGGCTGGA TCATTCTTCTCGTTCTAGTAGCTCTTGTCTGGTTCATCTATCAGAGAAAGCAGCCGAAGCATAAGCCAAGCACTCTTCCG CTCTGGAAACGCGTGATTACTCTCGTCATCACCGGTATCGTGATGGCTCTTGTGACGGTCTGTTACTTCCTCTCGCTTGG ATACCTGCCGATTTCCCTTGCCGTTGTTTTACTCTTCCAGTACTCCTGGATCGGTGTGGTCATCGAGGCAGTTACCCGAA GAAAACTTCCGTCGAGAAACAAAGTGATCGCCTGTCTGGTCATCCTCGTTGGTACGATCCTTGCAGGCGGCATCATCGGT TCCGGTCTCTCGCTTGCCGAGATGAATCCGGCCGGTATTGCCCTTGGACTTCTCGCAGCATTCTTCTACGCTCTGTTCGT CTATCTGAGCGGCAGAGTCAGCCCGGAACTTCCGCCGATGAACCGCAGTTTCTTTATTGCTACCGCCGGGATGCTCTTTG TTCTGCTGTTCGTCGGAACGGTCTACGGAGGATCTTCCGTCATCGAAGGAATCACGAATGTGAATGCTCTTGCCTACAGT ATTCCGCTTGGTCTGTTTGGTATCGCGATCCCGATCTTCTTCCTTGCAGTCGGTGCTCCCAAAGTCAGTACCGGTATGGC GACCATCCTGAACTCGGCTGAACTTCCGGTCGAGGTCCTTGCAGCCGCAGTGATCATTCTCGAACCGGTCGCCGCACTTC GCTGGGTAGGTGTCATCATCATTCTTCTGGGTATCGCTCTTCCGTACATCCTTGAACGAAGGATCACCAGCGGTCTGGAA GCGTAA
Upstream 100 bases:
>100_bases ACAGATATCTTTGCGTGTTACTAAAGTAATTTGTACTTATTGCAAAATATGCATAATTTATTATAGATTCTTCAGCCTAA TTTATTGAAAGGAGTCTTCT
Downstream 100 bases:
>100_bases AACCATCTAAAAAATATCTCATATCTTTTTTTGCCCGCTTTTTCAAAGGAAGGTCTTCTACCTCTAGCATTTTATATCCT CGAATATAACACAGATTATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 321; Mature: 321
Protein sequence:
>321_residues MDLKKLSNSVVFCSLLVLLASCSYAILSTIVTLAVMNGFGIPVVLVGKFFYGWIILLVLVALVWFIYQRKQPKHKPSTLP LWKRVITLVITGIVMALVTVCYFLSLGYLPISLAVVLLFQYSWIGVVIEAVTRRKLPSRNKVIACLVILVGTILAGGIIG SGLSLAEMNPAGIALGLLAAFFYALFVYLSGRVSPELPPMNRSFFIATAGMLFVLLFVGTVYGGSSVIEGITNVNALAYS IPLGLFGIAIPIFFLAVGAPKVSTGMATILNSAELPVEVLAAAVIILEPVAALRWVGVIIILLGIALPYILERRITSGLE A
Sequences:
>Translated_321_residues MDLKKLSNSVVFCSLLVLLASCSYAILSTIVTLAVMNGFGIPVVLVGKFFYGWIILLVLVALVWFIYQRKQPKHKPSTLP LWKRVITLVITGIVMALVTVCYFLSLGYLPISLAVVLLFQYSWIGVVIEAVTRRKLPSRNKVIACLVILVGTILAGGIIG SGLSLAEMNPAGIALGLLAAFFYALFVYLSGRVSPELPPMNRSFFIATAGMLFVLLFVGTVYGGSSVIEGITNVNALAYS IPLGLFGIAIPIFFLAVGAPKVSTGMATILNSAELPVEVLAAAVIILEPVAALRWVGVIIILLGIALPYILERRITSGLE A >Mature_321_residues MDLKKLSNSVVFCSLLVLLASCSYAILSTIVTLAVMNGFGIPVVLVGKFFYGWIILLVLVALVWFIYQRKQPKHKPSTLP LWKRVITLVITGIVMALVTVCYFLSLGYLPISLAVVLLFQYSWIGVVIEAVTRRKLPSRNKVIACLVILVGTILAGGIIG SGLSLAEMNPAGIALGLLAAFFYALFVYLSGRVSPELPPMNRSFFIATAGMLFVLLFVGTVYGGSSVIEGITNVNALAYS IPLGLFGIAIPIFFLAVGAPKVSTGMATILNSAELPVEVLAAAVIILEPVAALRWVGVIIILLGIALPYILERRITSGLE A
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34359; Mature: 34359
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLKKLSNSVVFCSLLVLLASCSYAILSTIVTLAVMNGFGIPVVLVGKFFYGWIILLVLV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH ALVWFIYQRKQPKHKPSTLPLWKRVITLVITGIVMALVTVCYFLSLGYLPISLAVVLLFQ HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YSWIGVVIEAVTRRKLPSRNKVIACLVILVGTILAGGIIGSGLSLAEMNPAGIALGLLAA HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHH FFYALFVYLSGRVSPELPPMNRSFFIATAGMLFVLLFVGTVYGGSSVIEGITNVNALAYS HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH IPLGLFGIAIPIFFLAVGAPKVSTGMATILNSAELPVEVLAAAVIILEPVAALRWVGVII HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH ILLGIALPYILERRITSGLEA HHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MDLKKLSNSVVFCSLLVLLASCSYAILSTIVTLAVMNGFGIPVVLVGKFFYGWIILLVLV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH ALVWFIYQRKQPKHKPSTLPLWKRVITLVITGIVMALVTVCYFLSLGYLPISLAVVLLFQ HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YSWIGVVIEAVTRRKLPSRNKVIACLVILVGTILAGGIIGSGLSLAEMNPAGIALGLLAA HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHH FFYALFVYLSGRVSPELPPMNRSFFIATAGMLFVLLFVGTVYGGSSVIEGITNVNALAYS HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH IPLGLFGIAIPIFFLAVGAPKVSTGMATILNSAELPVEVLAAAVIILEPVAALRWVGVII HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH ILLGIALPYILERRITSGLEA HHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA