| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124486514
Identifier: 124486514
GI number: 124486514
Start: 1736780
End: 1737607
Strand: Reverse
Name: 124486514
Synonym: Mlab_1702
Alternate gene names: NA
Gene position: 1737607-1736780 (Counterclockwise)
Preceding gene: 124486515
Following gene: 124486513
Centisome position: 96.27
GC content: 51.69
Gene sequence:
>828_bases ATGGCATTGAAAATACTCCATTCCGGTGGTCGGAAGAAAGAAAAAGAGACCGTTACCTACGAGCACGATAACGGGAGCGA TCTCAAGCAGTTTGCATACGGCAGATTCCCGATCGACTATGCGGTCAACTTCGAAGGTCTCAATCTTGCCGTTGATCTGG ACAGAGGCATGTATCATTACAGACGGGCGCTTGGGGACTGGAAAACCGATATCAACATCTCCGTAAACGGCGGTCATATG CTCATCCATCCCGTCGAACCGCTCAATCTCCCCGACAACCTCACCGATTTCATGGAGATCAGATTCGATCCGATCAAGAT CGAACCCGACGGAATCTGCGTCATCTTTGTAACCATGCCTATCGAGATCGGCGTTTTTCTCGAGTCGCCAAGCGGCTCAA CTGATGTCATCGACATCGTCTCCTATGTATATCCCAAATACTCCCTCTACGGGGGATCGAACCGCGGCGTCGTTACCAGA TTCAACGAAAGCAAGGTGTATTATTATCCGCCGGCGATGAAAAACTACGAGGCGGGTCTGCTGAAGCTCGAGATCGAAAA CAGATCCGATGAATGGGCGACAGTCGGCAGGGCCGTTATATTCCAGAAAGGTCTCTTCCTTTACTTTGACGAAAATCTCG TTGCCGCATCGGCTGAGATGAAGATCATCAGCCCGGACGTGGCGGTCGTCACCGGGGTCGATACTCCGCTCCGTCAGGGC ATGACCCGGTCGAACCGGCTCTTTAAAACCCGCAAACTCACGCCGTTCTATAATGTGACCGGCATGCTCAACGACACCGC TTATACAATGGATATGGGGCTGATCTGA
Upstream 100 bases:
>100_bases TTCGGTACTGCAGGGCCGGAAAATACACGTCCCGCCGGCCAATGAAAACTAACTTACCCCGATACGACCTACAGTAAATA TACGTCCGAGGAGCATGAAC
Downstream 100 bases:
>100_bases CATGGCTGACAACACCACCGAGATCCTCGTCGGCAATGCATTTCTGGATACTCCGCTTTTTGGGGAGATCACCTACGGCA ATCTGTTAGCGGCCATCCTC
Product: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 275; Mature: 274
Protein sequence:
>275_residues MALKILHSGGRKKEKETVTYEHDNGSDLKQFAYGRFPIDYAVNFEGLNLAVDLDRGMYHYRRALGDWKTDINISVNGGHM LIHPVEPLNLPDNLTDFMEIRFDPIKIEPDGICVIFVTMPIEIGVFLESPSGSTDVIDIVSYVYPKYSLYGGSNRGVVTR FNESKVYYYPPAMKNYEAGLLKLEIENRSDEWATVGRAVIFQKGLFLYFDENLVAASAEMKIISPDVAVVTGVDTPLRQG MTRSNRLFKTRKLTPFYNVTGMLNDTAYTMDMGLI
Sequences:
>Translated_275_residues MALKILHSGGRKKEKETVTYEHDNGSDLKQFAYGRFPIDYAVNFEGLNLAVDLDRGMYHYRRALGDWKTDINISVNGGHM LIHPVEPLNLPDNLTDFMEIRFDPIKIEPDGICVIFVTMPIEIGVFLESPSGSTDVIDIVSYVYPKYSLYGGSNRGVVTR FNESKVYYYPPAMKNYEAGLLKLEIENRSDEWATVGRAVIFQKGLFLYFDENLVAASAEMKIISPDVAVVTGVDTPLRQG MTRSNRLFKTRKLTPFYNVTGMLNDTAYTMDMGLI >Mature_274_residues ALKILHSGGRKKEKETVTYEHDNGSDLKQFAYGRFPIDYAVNFEGLNLAVDLDRGMYHYRRALGDWKTDINISVNGGHML IHPVEPLNLPDNLTDFMEIRFDPIKIEPDGICVIFVTMPIEIGVFLESPSGSTDVIDIVSYVYPKYSLYGGSNRGVVTRF NESKVYYYPPAMKNYEAGLLKLEIENRSDEWATVGRAVIFQKGLFLYFDENLVAASAEMKIISPDVAVVTGVDTPLRQGM TRSNRLFKTRKLTPFYNVTGMLNDTAYTMDMGLI
Specific function: Unknown
COG id: COG2430
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31098; Mature: 30967
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALKILHSGGRKKEKETVTYEHDNGSDLKQFAYGRFPIDYAVNFEGLNLAVDLDRGMYHY CEEEEEECCCCCCCCCEEEEECCCCCCHHHHHCCCCCEEEEEEECCEEEEEECCCCHHHH RRALGDWKTDINISVNGGHMLIHPVEPLNLPDNLTDFMEIRFDPIKIEPDGICVIFVTMP HHHHCCCCCEEEEEECCCEEEEEECCCCCCCCCCCHHHHEEECEEEECCCCEEEEEEEEC IEIGVFLESPSGSTDVIDIVSYVYPKYSLYGGSNRGVVTRFNESKVYYYPPAMKNYEAGL EEEEEEEECCCCCCHHHHHHHHHCCCEEEECCCCCCEEEEECCCEEEECCCCCCCCCCCE LKLEIENRSDEWATVGRAVIFQKGLFLYFDENLVAASAEMKIISPDVAVVTGVDTPLRQG EEEEECCCCCCHHHHHHEEEEECCEEEEECCCEEEEECEEEEECCCEEEEECCCCHHHHC MTRSNRLFKTRKLTPFYNVTGMLNDTAYTMDMGLI CCCCCCEEEEECCCCEEEEEEEECCCEEEEEECCC >Mature Secondary Structure ALKILHSGGRKKEKETVTYEHDNGSDLKQFAYGRFPIDYAVNFEGLNLAVDLDRGMYHY EEEEEECCCCCCCCCEEEEECCCCCCHHHHHCCCCCEEEEEEECCEEEEEECCCCHHHH RRALGDWKTDINISVNGGHMLIHPVEPLNLPDNLTDFMEIRFDPIKIEPDGICVIFVTMP HHHHCCCCCEEEEEECCCEEEEEECCCCCCCCCCCHHHHEEECEEEECCCCEEEEEEEEC IEIGVFLESPSGSTDVIDIVSYVYPKYSLYGGSNRGVVTRFNESKVYYYPPAMKNYEAGL EEEEEEEECCCCCCHHHHHHHHHCCCEEEECCCCCCEEEEECCCEEEECCCCCCCCCCCE LKLEIENRSDEWATVGRAVIFQKGLFLYFDENLVAASAEMKIISPDVAVVTGVDTPLRQG EEEEECCCCCCHHHHHHEEEEECCEEEEECCCEEEEECEEEEECCCEEEEECCCCHHHHC MTRSNRLFKTRKLTPFYNVTGMLNDTAYTMDMGLI CCCCCCEEEEECCCCEEEEEEEECCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA