| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124486512
Identifier: 124486512
GI number: 124486512
Start: 1735369
End: 1735845
Strand: Reverse
Name: 124486512
Synonym: Mlab_1700
Alternate gene names: NA
Gene position: 1735845-1735369 (Counterclockwise)
Preceding gene: 124486513
Following gene: 124486511
Centisome position: 96.17
GC content: 54.3
Gene sequence:
>477_bases ATGGATACTGCAGACGTAATTGCCCGGCTCTCTGCTGAAGACCTCGATCAGCGTCACGAGGCAGTAATGGATCTCGCGGC TCTGGGAAAAGAGGATCCTGACAGGATCATACCGGAGATCATTGATGCTCTGAAGACCGGGTCTATGAATCTTCGCTGGT ATCTCGGCCGTACCCTGATCAGAATCGGGCCGTCCGTTATCCCCTTCCTTGTCGCCGCTTCGGAAAGGGAGACGGATATG TCTGTCCAGAAGTATTACGGAGCAGTGTTCGCCGTGTTCGGACCCGAGGCCGTTTCAACGCTTGTGGATCTTTTCTCGTC GAAAAACCCGACGACCCGGGGTATGGCGGCCGCAGCCCTTGAAAAGATCGGAGACCCCTCCCTCCCCTCATTGAGGGAAG CTGCCAAAAGTCAGGATGTTACCGTGAAAAGCTGTGCTATCCTGACGCTCGCCAAATTCCAGATATACGATTACTGA
Upstream 100 bases:
>100_bases GAAACCGTCAAAGGCGGGCAAGGGAAGCGGTTTCACCCCGCAGGAAGTTCTTGGAAAAAGCGAGGTCTCCCCCGAAAACG CCGTGAAGGTGATCAAGTAA
Downstream 100 bases:
>100_bases TCCATGGCGGAACTTGTAACCTCCCCTGCCTACCGGGCGTATCTCGACGGTCTTATTGCCGGACTCGACCGGGCGATGGA AATCGCCAATAAGGCGAAAA
Product: metalloenzyme domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MDTADVIARLSAEDLDQRHEAVMDLAALGKEDPDRIIPEIIDALKTGSMNLRWYLGRTLIRIGPSVIPFLVAASERETDM SVQKYYGAVFAVFGPEAVSTLVDLFSSKNPTTRGMAAAALEKIGDPSLPSLREAAKSQDVTVKSCAILTLAKFQIYDY
Sequences:
>Translated_158_residues MDTADVIARLSAEDLDQRHEAVMDLAALGKEDPDRIIPEIIDALKTGSMNLRWYLGRTLIRIGPSVIPFLVAASERETDM SVQKYYGAVFAVFGPEAVSTLVDLFSSKNPTTRGMAAAALEKIGDPSLPSLREAAKSQDVTVKSCAILTLAKFQIYDY >Mature_158_residues MDTADVIARLSAEDLDQRHEAVMDLAALGKEDPDRIIPEIIDALKTGSMNLRWYLGRTLIRIGPSVIPFLVAASERETDM SVQKYYGAVFAVFGPEAVSTLVDLFSSKNPTTRGMAAAALEKIGDPSLPSLREAAKSQDVTVKSCAILTLAKFQIYDY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17238; Mature: 17238
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTADVIARLSAEDLDQRHEAVMDLAALGKEDPDRIIPEIIDALKTGSMNLRWYLGRTLI CCHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH RIGPSVIPFLVAASERETDMSVQKYYGAVFAVFGPEAVSTLVDLFSSKNPTTRGMAAAAL HHCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHH EKIGDPSLPSLREAAKSQDVTVKSCAILTLAKFQIYDY HHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDTADVIARLSAEDLDQRHEAVMDLAALGKEDPDRIIPEIIDALKTGSMNLRWYLGRTLI CCHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH RIGPSVIPFLVAASERETDMSVQKYYGAVFAVFGPEAVSTLVDLFSSKNPTTRGMAAAAL HHCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHH EKIGDPSLPSLREAAKSQDVTVKSCAILTLAKFQIYDY HHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA