| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124486502
Identifier: 124486502
GI number: 124486502
Start: 1725043
End: 1725399
Strand: Reverse
Name: 124486502
Synonym: Mlab_1690
Alternate gene names: NA
Gene position: 1725399-1725043 (Counterclockwise)
Preceding gene: 124486503
Following gene: 124486499
Centisome position: 95.59
GC content: 56.02
Gene sequence:
>357_bases ATGACGATCTACGTAACGACGCTGGATAAAACCCCGATCGCCGACAATCCCCATAACGTGGATGTCCGCAAAATCCACGG TTCGCCAAGCACCGATGTGGTGGTGATCACGCTCCAGCCCGGCGAGGCGCTGAAAAAACATCTGACCCCGGTCGATGTGC TGTTCTACGTTCTGGAAGGGGATGGGCTGATCGTGATCGGCGACGAGCAGGAGAAGGTCGAGAAGGATTCCCTGATTGAA AGCCCGAAAAACGTGCCGCATCTGCTGATAAACGACAGTGACGACGTGTTCCGGGTGATGGTGATCAAGAAGCTGACCAC CGGGGACGGAAAGGAAGCGAAGCCGAGACTGCTCTGA
Upstream 100 bases:
>100_bases ACGCACTGCAGAAACCGGAGCACTGGAGGGAGTAAGGTTTTCTCCCTCTTTTATATGCCTCATCCCGAAGCTATTTGAGG CTTCTCGCGAAGTTGATAGT
Downstream 100 bases:
>100_bases GAGCCCCCGGCTTAGAGCGACGCTCTCTTCTCCCTGTTTTTCGCGAAGAGGGCGGCAAGTCCGGCACACAGCACGAGGAT CGGGCCGATTACATACCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: Cupin Family Protein; Cupin 2 Barrel; Cupin 2 Conserved Barrel Domain-Containing Protein; Cupin Region; Cupin 2 Domain-Containing Protein
Number of amino acids: Translated: 118; Mature: 117
Protein sequence:
>118_residues MTIYVTTLDKTPIADNPHNVDVRKIHGSPSTDVVVITLQPGEALKKHLTPVDVLFYVLEGDGLIVIGDEQEKVEKDSLIE SPKNVPHLLINDSDDVFRVMVIKKLTTGDGKEAKPRLL
Sequences:
>Translated_118_residues MTIYVTTLDKTPIADNPHNVDVRKIHGSPSTDVVVITLQPGEALKKHLTPVDVLFYVLEGDGLIVIGDEQEKVEKDSLIE SPKNVPHLLINDSDDVFRVMVIKKLTTGDGKEAKPRLL >Mature_117_residues TIYVTTLDKTPIADNPHNVDVRKIHGSPSTDVVVITLQPGEALKKHLTPVDVLFYVLEGDGLIVIGDEQEKVEKDSLIES PKNVPHLLINDSDDVFRVMVIKKLTTGDGKEAKPRLL
Specific function: Unknown
COG id: COG0662
COG function: function code G; Mannose-6-phosphate isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13037; Mature: 12906
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIYVTTLDKTPIADNPHNVDVRKIHGSPSTDVVVITLQPGEALKKHLTPVDVLFYVLEG CEEEEEECCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCHHHHHHCCHHHEEEEEECC DGLIVIGDEQEKVEKDSLIESPKNVPHLLINDSDDVFRVMVIKKLTTGDGKEAKPRLL CCEEEECCCHHHHHHHHHHCCCCCCCEEEECCCCCEEEEEEEEEECCCCCCCCCCCCC >Mature Secondary Structure TIYVTTLDKTPIADNPHNVDVRKIHGSPSTDVVVITLQPGEALKKHLTPVDVLFYVLEG EEEEEECCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCHHHHHHCCHHHEEEEEECC DGLIVIGDEQEKVEKDSLIESPKNVPHLLINDSDDVFRVMVIKKLTTGDGKEAKPRLL CCEEEECCCHHHHHHHHHHCCCCCCCEEEECCCCCEEEEEEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA