Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

Click here to switch to the map view.

The map label for this gene is 124486401

Identifier: 124486401

GI number: 124486401

Start: 1618363

End: 1619196

Strand: Reverse

Name: 124486401

Synonym: Mlab_1587

Alternate gene names: NA

Gene position: 1619196-1618363 (Counterclockwise)

Preceding gene: 124486402

Following gene: 124486400

Centisome position: 89.71

GC content: 49.52

Gene sequence:

>834_bases
ATGGGTGGTGAAGTACGGGAATATGATGATTCGATCCTTACCGAGTCTGGAGACTCGCAGAGTTCCAAGAGCGGAAGATA
CTGGGAAATAGATGCTATCCGCGGGATCGCAATCCTTGGCATGCTGTTTTACCATCTCCTCGCCTGTCTTGTTTTGTTCC
ATATAATCGTCGAGGATCCGAACTTCCTTTCCTATTATAATACGTATATGTTCGGGTCGGGAGTCTTCGTTCTTCTTGCG
GGTATCGCGATGATCCTTCGTCATGAACGGATGCGGGGAAGAACGACAAAGGAATACTACCTGGCTCTGGTCATCAAGGC
GATGTTTCTTCTGGCTCTCGGTTTCTGTATTACCATCGGCAGCTGGATCGGGGCTTCGCTTTTTCTCGGCAGCGAGGCAT
TTATCAAGTTCGGTTTTCTGCATATGCTTGGTGTATCCATGCTTTTGGCGATCCCTCTCCTTAGATACGGGAGATGGAAC
ATCATCCTTGGTCTGATTATCATCGCGATCGGGGCGTTTATCTTCCCGTACATCAATGATCCGTCCTGGCTGTATCCTTT
GGGCATCCATGCCGAGGATTTCATGCAGTATACGCAGGATTATTTCCCGCTGTTCCCCTGGTTTGGCGTGCTTCTTTTAG
GGGTCGGTCTTGGAACCGTTTTCTATCCAAACGGCAGGCGCAGTTTTACCATCCGGGAACCTGGAAAAATCGGGGAGGCT
TTTGCGAAACTCGGGAACGGGGCCGTTACGCTTTTCATCTATCTCGTCCACATCCCGGTGATATTCGTCATTCTCTGGAT
CTTCTCTTCCCTGACGGGAATTGGGTATTTGTGA

Upstream 100 bases:

>100_bases
TCTTTGTAATGCTGTGGATTTTGAGCGTGACGACCGGCATCGGGTATGTTTAGTCGTCCAGAAATTACTTAGATATACAA
AAACCAATATGAAGGGAACA

Downstream 100 bases:

>100_bases
TATGATTATTGATATACTGAACTCCGACTCGGACCCGGCCGGGCGAAATATCCGGGCAGCTATCGACGAACTTTTGAAAA
ATCCGCCGGAGGGGGGTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 277; Mature: 276

Protein sequence:

>277_residues
MGGEVREYDDSILTESGDSQSSKSGRYWEIDAIRGIAILGMLFYHLLACLVLFHIIVEDPNFLSYYNTYMFGSGVFVLLA
GIAMILRHERMRGRTTKEYYLALVIKAMFLLALGFCITIGSWIGASLFLGSEAFIKFGFLHMLGVSMLLAIPLLRYGRWN
IILGLIIIAIGAFIFPYINDPSWLYPLGIHAEDFMQYTQDYFPLFPWFGVLLLGVGLGTVFYPNGRRSFTIREPGKIGEA
FAKLGNGAVTLFIYLVHIPVIFVILWIFSSLTGIGYL

Sequences:

>Translated_277_residues
MGGEVREYDDSILTESGDSQSSKSGRYWEIDAIRGIAILGMLFYHLLACLVLFHIIVEDPNFLSYYNTYMFGSGVFVLLA
GIAMILRHERMRGRTTKEYYLALVIKAMFLLALGFCITIGSWIGASLFLGSEAFIKFGFLHMLGVSMLLAIPLLRYGRWN
IILGLIIIAIGAFIFPYINDPSWLYPLGIHAEDFMQYTQDYFPLFPWFGVLLLGVGLGTVFYPNGRRSFTIREPGKIGEA
FAKLGNGAVTLFIYLVHIPVIFVILWIFSSLTGIGYL
>Mature_276_residues
GGEVREYDDSILTESGDSQSSKSGRYWEIDAIRGIAILGMLFYHLLACLVLFHIIVEDPNFLSYYNTYMFGSGVFVLLAG
IAMILRHERMRGRTTKEYYLALVIKAMFLLALGFCITIGSWIGASLFLGSEAFIKFGFLHMLGVSMLLAIPLLRYGRWNI
ILGLIIIAIGAFIFPYINDPSWLYPLGIHAEDFMQYTQDYFPLFPWFGVLLLGVGLGTVFYPNGRRSFTIREPGKIGEAF
AKLGNGAVTLFIYLVHIPVIFVILWIFSSLTGIGYL

Specific function: Unknown

COG id: COG3503

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31169; Mature: 31038

Theoretical pI: Translated: 7.14; Mature: 7.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGEVREYDDSILTESGDSQSSKSGRYWEIDAIRGIAILGMLFYHLLACLVLFHIIVEDP
CCCCHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NFLSYYNTYMFGSGVFVLLAGIAMILRHERMRGRTTKEYYLALVIKAMFLLALGFCITIG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SWIGASLFLGSEAFIKFGFLHMLGVSMLLAIPLLRYGRWNIILGLIIIAIGAFIFPYIND
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCC
PSWLYPLGIHAEDFMQYTQDYFPLFPWFGVLLLGVGLGTVFYPNGRRSFTIREPGKIGEA
CCEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEECCCCCEEEEECCCCHHHHH
FAKLGNGAVTLFIYLVHIPVIFVILWIFSSLTGIGYL
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
GGEVREYDDSILTESGDSQSSKSGRYWEIDAIRGIAILGMLFYHLLACLVLFHIIVEDP
CCCHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
NFLSYYNTYMFGSGVFVLLAGIAMILRHERMRGRTTKEYYLALVIKAMFLLALGFCITIG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SWIGASLFLGSEAFIKFGFLHMLGVSMLLAIPLLRYGRWNIILGLIIIAIGAFIFPYIND
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCC
PSWLYPLGIHAEDFMQYTQDYFPLFPWFGVLLLGVGLGTVFYPNGRRSFTIREPGKIGEA
CCEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHEECCCCCEEEEECCCCHHHHH
FAKLGNGAVTLFIYLVHIPVIFVILWIFSSLTGIGYL
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA