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The map label for this gene is rplP0

Identifier: 124486395

GI number: 124486395

Start: 1612733

End: 1613581

Strand: Reverse

Name: rplP0

Synonym: Mlab_1580

Alternate gene names: 124486395

Gene position: 1613581-1612733 (Counterclockwise)

Preceding gene: 124486396

Following gene: 124486394

Centisome position: 89.4

GC content: 51.71

Gene sequence:

>849_bases
ATGGCAATTTATACCCACCATCTTCCCGCATGGAAACGTGAAGAAGTTGAGCAGATCAAAGATCTCGCCGACAAGTATGC
ACTCGTCGGCTTAGTTGATGTCTACGGTATTCCCGCAAGACAGTTCCAGCAGATCCGCAGAAATCTGCGCAGCAATGCAG
TTGTGAAGGTTGCAAGAAACACCCTTGTCGAGCATTCCATGAATGAACTCGGCGGTCACTTCGTTGATCTGAACGGGAAG
GTTTCCGAACACTCCGCCCTCATCTTTGCAAACGGCAACCCCTTTAAGCTGTTCAAGTCCCTTGAGCAGACGAAGACAAA
GCGTTCCGCAAAAGCAGGCGAGATCACTCCTGAAGACATTGTTGTTCCGGCAGGACCAACTACCTTTAAGCCCGGACCGA
TCGTAGGAGAACTCCAGCAGGCTGGTATCCCGGCAGCTATCGACGGCGGAAAGGTCAAAATCAAAGAGACCAAGACCGTT
GTTAAAGCTGGCGAGGCTATCAACAAGAAACAGGCCGATGTGCTTTCAAAGCTTGGCATTAAACCAATGCCGGTCGGTCT
CTCCCTCCTCGCAGTATGTTACGAGGGAGACCTGTATCTGCCGGACGTCCTCTCTGTAGACGACGAGGCATACAAGGCAA
AGATCACTCTCGCAGCACAGCAGGCATTCAACCTCGCAGTCAACGCAGCAGTTCCAACGGCATGTGTCGGTGTTACTGAG
GCTCAGATCGCGAAGGCCGTCCGTGAGGCAAGAAACCTCGGTGTAGAAGCATCCATCTATGAGAAGGGTGTCATCGAGCT
GATCATCAGCAAGGCATACAGACAAGCAAACGCCCTGAAGGCAATTTAA

Upstream 100 bases:

>100_bases
TCGTAAAGAGGGTTGTAGGAAGACTTGAAAGCGGAGAGTTAAACATCCGTTCCGTCTACGTCAAAACCACGATGGGTCCA
GCAGTGAAGGTGATGTAAGT

Downstream 100 bases:

>100_bases
ACAAATACAAAGGTGAAATCAAAATGGAGTATATTTACGCAGCTCTGTTAGTTCACTCCGCAGCTAAGACTGTGGATGAA
GAATCGGTAAAGGCAGTTCT

Product: acidic ribosomal protein P0

Products: NA

Alternate protein names: L10E [H]

Number of amino acids: Translated: 282; Mature: 281

Protein sequence:

>282_residues
MAIYTHHLPAWKREEVEQIKDLADKYALVGLVDVYGIPARQFQQIRRNLRSNAVVKVARNTLVEHSMNELGGHFVDLNGK
VSEHSALIFANGNPFKLFKSLEQTKTKRSAKAGEITPEDIVVPAGPTTFKPGPIVGELQQAGIPAAIDGGKVKIKETKTV
VKAGEAINKKQADVLSKLGIKPMPVGLSLLAVCYEGDLYLPDVLSVDDEAYKAKITLAAQQAFNLAVNAAVPTACVGVTE
AQIAKAVREARNLGVEASIYEKGVIELIISKAYRQANALKAI

Sequences:

>Translated_282_residues
MAIYTHHLPAWKREEVEQIKDLADKYALVGLVDVYGIPARQFQQIRRNLRSNAVVKVARNTLVEHSMNELGGHFVDLNGK
VSEHSALIFANGNPFKLFKSLEQTKTKRSAKAGEITPEDIVVPAGPTTFKPGPIVGELQQAGIPAAIDGGKVKIKETKTV
VKAGEAINKKQADVLSKLGIKPMPVGLSLLAVCYEGDLYLPDVLSVDDEAYKAKITLAAQQAFNLAVNAAVPTACVGVTE
AQIAKAVREARNLGVEASIYEKGVIELIISKAYRQANALKAI
>Mature_281_residues
AIYTHHLPAWKREEVEQIKDLADKYALVGLVDVYGIPARQFQQIRRNLRSNAVVKVARNTLVEHSMNELGGHFVDLNGKV
SEHSALIFANGNPFKLFKSLEQTKTKRSAKAGEITPEDIVVPAGPTTFKPGPIVGELQQAGIPAAIDGGKVKIKETKTVV
KAGEAINKKQADVLSKLGIKPMPVGLSLLAVCYEGDLYLPDVLSVDDEAYKAKITLAAQQAFNLAVNAAVPTACVGVTEA
QIAKAVREARNLGVEASIYEKGVIELIISKAYRQANALKAI

Specific function: Ribosomal protein P0 is the functional equivalent of E.coli protein L10 [H]

COG id: COG0244

COG function: function code J; Ribosomal protein L10

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L10P family [H]

Homologues:

Organism=Homo sapiens, GI4506667, Length=230, Percent_Identity=25.6521739130435, Blast_Score=75, Evalue=9e-14,
Organism=Homo sapiens, GI16933546, Length=230, Percent_Identity=25.6521739130435, Blast_Score=75, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI17506815, Length=228, Percent_Identity=25, Blast_Score=79, Evalue=4e-15,
Organism=Saccharomyces cerevisiae, GI6323371, Length=231, Percent_Identity=25.974025974026, Blast_Score=69, Evalue=6e-13,
Organism=Drosophila melanogaster, GI17737731, Length=249, Percent_Identity=25.7028112449799, Blast_Score=83, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001813
- InterPro:   IPR001790
- InterPro:   IPR013522
- InterPro:   IPR022909 [H]

Pfam domain/function: PF00428 Ribosomal_60s; PF00466 Ribosomal_L10 [H]

EC number: NA

Molecular weight: Translated: 30419; Mature: 30287

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIYTHHLPAWKREEVEQIKDLADKYALVGLVDVYGIPARQFQQIRRNLRSNAVVKVARN
CEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHH
TLVEHSMNELGGHFVDLNGKVSEHSALIFANGNPFKLFKSLEQTKTKRSAKAGEITPEDI
HHHHHHHHHHCCEEEECCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCE
VVPAGPTTFKPGPIVGELQQAGIPAAIDGGKVKIKETKTVVKAGEAINKKQADVLSKLGI
EECCCCCCCCCCCCHHHHHHCCCCEEECCCEEEEEHHHHHHHHHHHHCHHHHHHHHHCCC
KPMPVGLSLLAVCYEGDLYLPDVLSVDDEAYKAKITLAAQQAFNLAVNAAVPTACVGVTE
CCCCHHHHHHHHHHCCCEECCCHHCCCCCHHEEEEEEEHHHHHHHEEECCCCHHHHCCCH
AQIAKAVREARNLGVEASIYEKGVIELIISKAYRQANALKAI
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AIYTHHLPAWKREEVEQIKDLADKYALVGLVDVYGIPARQFQQIRRNLRSNAVVKVARN
EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHH
TLVEHSMNELGGHFVDLNGKVSEHSALIFANGNPFKLFKSLEQTKTKRSAKAGEITPEDI
HHHHHHHHHHCCEEEECCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCE
VVPAGPTTFKPGPIVGELQQAGIPAAIDGGKVKIKETKTVVKAGEAINKKQADVLSKLGI
EECCCCCCCCCCCCHHHHHHCCCCEEECCCEEEEEHHHHHHHHHHHHCHHHHHHHHHCCC
KPMPVGLSLLAVCYEGDLYLPDVLSVDDEAYKAKITLAAQQAFNLAVNAAVPTACVGVTE
CCCCHHHHHHHHHHCCCEECCCHHCCCCCHHEEEEEEEHHHHHHHEEECCCCHHHHCCCH
AQIAKAVREARNLGVEASIYEKGVIELIISKAYRQANALKAI
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA