BacMap

Definition	Methanocorpusculum labreanum Z chromosome, complete genome.
Accession	NC_008942
Length	1,804,962

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The map label for this gene is bcrA [H]

Identifier: 124486363

GI number: 124486363

Start: 1583219

End: 1584079

Strand: Reverse

Name: bcrA [H]

Synonym: Mlab_1548

Alternate gene names: 124486363

Gene position: 1584079-1583219 (Counterclockwise)

Preceding gene: 124486364

Following gene: 124486362

Centisome position: 87.76

GC content: 45.88

Gene sequence:

>861_bases
ATGTCTGACGCAATTTGTGTGCATGAATTATGTAAGGAATATCCCGACTTCTCCCTGCAGAACGTTTCATTTTGTCTGCC
TAAAGGAAGCATAATGGGATTTATCGGGGAAAACGGAGCCGGAAAAACAACAACAATAAAAACGATGCTTGGGATCGCCA
AAAAAACCAGCGGCTCAGTAAAACTGTTCGGGCTGGATCTTGCGGATCACGAAAAGGAGATCAAGAACCGGATCGGTGTC
GTCTTCGATGAATGCAGTTTTCACGACACGCTCACCGCGCTTGATGTGGCGAAGATCCTTGGGAAAATCTATGCGGATTG
GGATGATCCACTCTATATCAAATATCTCAAACAGTTTGATCTCCCGGAAAAGAAAAAGATCAAAGAGTACTCCCGGGGCA
TGAAAATGAAGCTTGGGATCGCAGCGGCTCTTTCCCATCACCCGGATCTGCTGATCCTTGATGAACCGACCAGCGGACTC
GATCCGGTCATCCGTGAAGAGATACTGGATATCTTCCTTGAATTTATTCAGGATGAGGAGCACTCGATCCTTCTTTCCTC
GCACATCACAAGCGATCTCGACAAAATCGCCGATTACCTTACCTTTATCCATGAGGGAAAGATCGTGCTTTCCAAATCCA
AAGACGAGATCCTGGAAGATCTGGGTATTCTGAAATGCAGTCTCGAGGAGTTTGGTGCCCTTGACAAAACATCATTTATC
ACCTACCGAAAGAATCAGTTTGGCTGTGAGGTGCTGATCAAAGACAAAATGAACTTCATTTCACGGCACCCGGATATGAT
CGTAGATCCTGTTTCGACGGAATCGGTTATGGTGTTTTATGCAAGGGGGAAAACCGTATGA

Upstream 100 bases:

>100_bases
AAGAACATCTGCAAAAGGCAGTTGATGCGGCGAAAAGTTTCGGCATTGGTAAACAGGAACTTATGGAAATGCTTGAGATC
ATCTATGAAGGAGAATAAGA

Downstream 100 bases:

>100_bases
AACAATTTCTTTCCGGCCTTCTGCTGAAGGATCTGCTGAACCTTCGCCCAATGACCAAGACCCTGGTCTTTATGTTTCTT
ATCTTCGGGATCGTTTTCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 285

Protein sequence:

>286_residues
MSDAICVHELCKEYPDFSLQNVSFCLPKGSIMGFIGENGAGKTTTIKTMLGIAKKTSGSVKLFGLDLADHEKEIKNRIGV
VFDECSFHDTLTALDVAKILGKIYADWDDPLYIKYLKQFDLPEKKKIKEYSRGMKMKLGIAAALSHHPDLLILDEPTSGL
DPVIREEILDIFLEFIQDEEHSILLSSHITSDLDKIADYLTFIHEGKIVLSKSKDEILEDLGILKCSLEEFGALDKTSFI
TYRKNQFGCEVLIKDKMNFISRHPDMIVDPVSTESVMVFYARGKTV

Sequences:

>Translated_286_residues
MSDAICVHELCKEYPDFSLQNVSFCLPKGSIMGFIGENGAGKTTTIKTMLGIAKKTSGSVKLFGLDLADHEKEIKNRIGV
VFDECSFHDTLTALDVAKILGKIYADWDDPLYIKYLKQFDLPEKKKIKEYSRGMKMKLGIAAALSHHPDLLILDEPTSGL
DPVIREEILDIFLEFIQDEEHSILLSSHITSDLDKIADYLTFIHEGKIVLSKSKDEILEDLGILKCSLEEFGALDKTSFI
TYRKNQFGCEVLIKDKMNFISRHPDMIVDPVSTESVMVFYARGKTV
>Mature_285_residues
SDAICVHELCKEYPDFSLQNVSFCLPKGSIMGFIGENGAGKTTTIKTMLGIAKKTSGSVKLFGLDLADHEKEIKNRIGVV
FDECSFHDTLTALDVAKILGKIYADWDDPLYIKYLKQFDLPEKKKIKEYSRGMKMKLGIAAALSHHPDLLILDEPTSGLD
PVIREEILDIFLEFIQDEEHSILLSSHITSDLDKIADYLTFIHEGKIVLSKSKDEILEDLGILKCSLEEFGALDKTSFIT
YRKNQFGCEVLIKDKMNFISRHPDMIVDPVSTESVMVFYARGKTV

Specific function: Part of the binding-protein-dependent transport system for bacitracin that confer resistance to this antibiotic. Probably responsible for energy coupling to the transport system [H]

COG id: COG1131

COG function: function code V; ABC-type multidrug transport system, ATPase component

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI45446740, Length=217, Percent_Identity=32.258064516129, Blast_Score=105, Evalue=4e-23,
Organism=Homo sapiens, GI47078218, Length=217, Percent_Identity=32.258064516129, Blast_Score=105, Evalue=4e-23,
Organism=Homo sapiens, GI153792144, Length=202, Percent_Identity=31.1881188118812, Blast_Score=93, Evalue=2e-19,
Organism=Homo sapiens, GI21536376, Length=233, Percent_Identity=28.755364806867, Blast_Score=92, Evalue=4e-19,
Organism=Homo sapiens, GI27881501, Length=236, Percent_Identity=27.1186440677966, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI150417984, Length=216, Percent_Identity=28.2407407407407, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI30795238, Length=236, Percent_Identity=27.1186440677966, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI105990541, Length=223, Percent_Identity=29.1479820627803, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI6005701, Length=191, Percent_Identity=28.2722513089005, Blast_Score=85, Evalue=8e-17,
Organism=Homo sapiens, GI27436953, Length=231, Percent_Identity=24.2424242424242, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI116734710, Length=207, Percent_Identity=29.951690821256, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI31657092, Length=201, Percent_Identity=27.363184079602, Blast_Score=83, Evalue=4e-16,
Organism=Homo sapiens, GI27262624, Length=235, Percent_Identity=23.4042553191489, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI27262626, Length=235, Percent_Identity=23.4042553191489, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI27477115, Length=237, Percent_Identity=28.6919831223629, Blast_Score=74, Evalue=1e-13,
Organism=Escherichia coli, GI48994943, Length=251, Percent_Identity=28.2868525896414, Blast_Score=118, Evalue=4e-28,
Organism=Escherichia coli, GI1786319, Length=228, Percent_Identity=33.7719298245614, Blast_Score=115, Evalue=4e-27,
Organism=Escherichia coli, GI87081782, Length=219, Percent_Identity=28.7671232876712, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1789032, Length=214, Percent_Identity=28.5046728971963, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI48994997, Length=237, Percent_Identity=26.5822784810127, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1787029, Length=204, Percent_Identity=28.4313725490196, Blast_Score=84, Evalue=8e-18,
Organism=Escherichia coli, GI1787759, Length=260, Percent_Identity=24.6153846153846, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI87082268, Length=218, Percent_Identity=28.8990825688073, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1789962, Length=224, Percent_Identity=28.125, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1788761, Length=239, Percent_Identity=23.0125523012552, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1789672, Length=222, Percent_Identity=27.027027027027, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1788506, Length=208, Percent_Identity=27.8846153846154, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1789963, Length=228, Percent_Identity=25.4385964912281, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1786872, Length=195, Percent_Identity=29.2307692307692, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1787500, Length=225, Percent_Identity=24.8888888888889, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1789593, Length=239, Percent_Identity=24.6861924686192, Blast_Score=78, Evalue=8e-16,
Organism=Escherichia coli, GI1786398, Length=209, Percent_Identity=28.7081339712919, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1787758, Length=263, Percent_Identity=23.574144486692, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1787164, Length=216, Percent_Identity=24.537037037037, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI48995001, Length=220, Percent_Identity=26.3636363636364, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI1790525, Length=215, Percent_Identity=29.3023255813954, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1787548, Length=232, Percent_Identity=23.2758620689655, Blast_Score=74, Evalue=8e-15,
Organism=Escherichia coli, GI1786253, Length=207, Percent_Identity=26.5700483091787, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1790190, Length=208, Percent_Identity=29.8076923076923, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI48994883, Length=217, Percent_Identity=25.8064516129032, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1787792, Length=210, Percent_Identity=29.5238095238095, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI1786563, Length=226, Percent_Identity=26.9911504424779, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI87081834, Length=198, Percent_Identity=28.2828282828283, Blast_Score=71, Evalue=7e-14,
Organism=Escherichia coli, GI2367384, Length=207, Percent_Identity=30.4347826086957, Blast_Score=71, Evalue=8e-14,
Organism=Escherichia coli, GI1787547, Length=224, Percent_Identity=27.2321428571429, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI87081791, Length=226, Percent_Identity=22.5663716814159, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1790162, Length=233, Percent_Identity=25.3218884120172, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1789873, Length=187, Percent_Identity=26.7379679144385, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1786698, Length=177, Percent_Identity=28.2485875706215, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1786803, Length=214, Percent_Identity=24.2990654205607, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1788472, Length=206, Percent_Identity=26.2135922330097, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1788210, Length=214, Percent_Identity=25.2336448598131, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1788897, Length=216, Percent_Identity=27.3148148148148, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1788644, Length=229, Percent_Identity=25.764192139738, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1788540, Length=180, Percent_Identity=24.4444444444444, Blast_Score=61, Evalue=7e-11,
Organism=Escherichia coli, GI1788450, Length=200, Percent_Identity=23, Blast_Score=61, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI71983523, Length=201, Percent_Identity=27.363184079602, Blast_Score=89, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI71983510, Length=201, Percent_Identity=27.363184079602, Blast_Score=89, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI71983516, Length=201, Percent_Identity=27.363184079602, Blast_Score=89, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17510237, Length=201, Percent_Identity=26.865671641791, Blast_Score=85, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI115533608, Length=209, Percent_Identity=27.2727272727273, Blast_Score=79, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17565586, Length=194, Percent_Identity=26.2886597938144, Blast_Score=78, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI193208177, Length=216, Percent_Identity=28.2407407407407, Blast_Score=74, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI193211015, Length=215, Percent_Identity=24.1860465116279, Blast_Score=64, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI71996809, Length=215, Percent_Identity=24.1860465116279, Blast_Score=64, Evalue=6e-11,
Organism=Drosophila melanogaster, GI85725262, Length=255, Percent_Identity=28.6274509803922, Blast_Score=102, Evalue=3e-22,
Organism=Drosophila melanogaster, GI24582014, Length=217, Percent_Identity=28.110599078341, Blast_Score=101, Evalue=5e-22,
Organism=Drosophila melanogaster, GI24582012, Length=217, Percent_Identity=28.110599078341, Blast_Score=101, Evalue=5e-22,
Organism=Drosophila melanogaster, GI24650853, Length=218, Percent_Identity=28.8990825688073, Blast_Score=95, Evalue=5e-20,
Organism=Drosophila melanogaster, GI24650855, Length=218, Percent_Identity=28.8990825688073, Blast_Score=95, Evalue=6e-20,
Organism=Drosophila melanogaster, GI281362751, Length=218, Percent_Identity=28.8990825688073, Blast_Score=94, Evalue=7e-20,
Organism=Drosophila melanogaster, GI24666092, Length=195, Percent_Identity=29.7435897435897, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI116007328, Length=220, Percent_Identity=29.0909090909091, Blast_Score=93, Evalue=2e-19,
Organism=Drosophila melanogaster, GI28574150, Length=220, Percent_Identity=29.0909090909091, Blast_Score=93, Evalue=2e-19,
Organism=Drosophila melanogaster, GI221512771, Length=213, Percent_Identity=28.169014084507, Blast_Score=90, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24643674, Length=213, Percent_Identity=29.1079812206573, Blast_Score=90, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24648314, Length=205, Percent_Identity=29.2682926829268, Blast_Score=84, Evalue=8e-17,
Organism=Drosophila melanogaster, GI28573571, Length=186, Percent_Identity=31.1827956989247, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI28573573, Length=186, Percent_Identity=31.1827956989247, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI221500365, Length=210, Percent_Identity=23.3333333333333, Blast_Score=68, Evalue=6e-12,
Organism=Drosophila melanogaster, GI116007184, Length=210, Percent_Identity=23.3333333333333, Blast_Score=68, Evalue=6e-12,
Organism=Drosophila melanogaster, GI28571209, Length=200, Percent_Identity=25.5, Blast_Score=65, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 32193; Mature: 32061

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDAICVHELCKEYPDFSLQNVSFCLPKGSIMGFIGENGAGKTTTIKTMLGIAKKTSGSV
CCCCHHHHHHHHHCCCCCCCCCEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCE
KLFGLDLADHEKEIKNRIGVVFDECSFHDTLTALDVAKILGKIYADWDDPLYIKYLKQFD
EEEEECHHHHHHHHHHHHCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC
LPEKKKIKEYSRGMKMKLGIAAALSHHPDLLILDEPTSGLDPVIREEILDIFLEFIQDEE
CCHHHHHHHHHCCCEEEEHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCC
HSILLSSHITSDLDKIADYLTFIHEGKIVLSKSKDEILEDLGILKCSLEEFGALDKTSFI
CEEEEHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHEECHHHCCCCCCCEEE
TYRKNQFGCEVLIKDKMNFISRHPDMIVDPVSTESVMVFYARGKTV
EEECCCCCCEEEEHHHHHHHHCCCCEEECCCCCCEEEEEEECCCCC
>Mature Secondary Structure 
SDAICVHELCKEYPDFSLQNVSFCLPKGSIMGFIGENGAGKTTTIKTMLGIAKKTSGSV
CCCHHHHHHHHHCCCCCCCCCEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCE
KLFGLDLADHEKEIKNRIGVVFDECSFHDTLTALDVAKILGKIYADWDDPLYIKYLKQFD
EEEEECHHHHHHHHHHHHCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC
LPEKKKIKEYSRGMKMKLGIAAALSHHPDLLILDEPTSGLDPVIREEILDIFLEFIQDEE
CCHHHHHHHHHCCCEEEEHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCC
HSILLSSHITSDLDKIADYLTFIHEGKIVLSKSKDEILEDLGILKCSLEEFGALDKTSFI
CEEEEHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHEECHHHCCCCCCCEEE
TYRKNQFGCEVLIKDKMNFISRHPDMIVDPVSTESVMVFYARGKTV
EEECCCCCCEEEEHHHHHHHHCCCCEEECCCCCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7476193 [H]