Click here to switch to the map view.

The map label for this gene is 124486297

Identifier: 124486297

GI number: 124486297

Start: 1518455

End: 1519054

Strand: Reverse

Name: 124486297

Synonym: Mlab_1481

Alternate gene names: NA

Gene position: 1519054-1518455 (Counterclockwise)

Preceding gene: 124486298

Following gene: 124486296

Centisome position: 84.16

GC content: 51.17

Gene sequence:

>600_bases
ATGAAAGTAGGTGTGCTCTACAGCGGCGGTAAAGACAGCAGTCTTGCCGCGGTCCTGTTGTCACGGGATTATGATGTGGA
GCTTTTGACCTTCGTCTTTGACGAAACCCATGCTGTGCCTTCTATCGAGGCGGCGGCAAAGGAAACCGGTTTCCCCTGGA
AGAAACTGGTCTTTGCGCCAGGTTTCCTTGATGAGGTCGTGGACAACATCGTTCGCGACGGGCATCCTGCAAATGCCATC
AACGAAATCCACCGACGGTCCCTCTGTGCTGCAGCACAGGAATATGAGGTGGTCGCCGACGGAACCCGACGAGATGACCG
GGTTCCGATGCGGACACAGTCTGAAGTGCAGAGTCTGGAGATGAAGTACGGGGTAAGTTATATCCGCCCCTTACTTGGCA
TCGGAAAAACAGAGATCATCCGGTTGGCGGAAAAGTTCTTCGAGATCGCCTACGGCGAAACAGGAACGATTCCAAACGGT
GATTTCGAAAACGAGATCAGGTCCGAAATGACTCGGAGAGGAATAGACTTTGTGTCTCTCTTCCCGAAAAATCATGAACA
GTCTCTGATCATCAAGAAAAAAATGGTGAATGAACCATGA

Upstream 100 bases:

>100_bases
AATCCGGACGCCTGCGTCAGAAAATTACCGATGAACAACTCAGACAGCTGTTAACTCAGATTGTCCCGCAGAAGAAGGAA
TTCAATATCCGCAGGGTTGG

Downstream 100 bases:

>100_bases
GCAAACTTACCAAAAGCCGTAAGATTCGTCTTGCAAAGGCAACCCAGCAGAACCGCCGTGTTCCTGCCTGGGTCATGATC
AAAACCAAGCGTACCGTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MKVGVLYSGGKDSSLAAVLLSRDYDVELLTFVFDETHAVPSIEAAAKETGFPWKKLVFAPGFLDEVVDNIVRDGHPANAI
NEIHRRSLCAAAQEYEVVADGTRRDDRVPMRTQSEVQSLEMKYGVSYIRPLLGIGKTEIIRLAEKFFEIAYGETGTIPNG
DFENEIRSEMTRRGIDFVSLFPKNHEQSLIIKKKMVNEP

Sequences:

>Translated_199_residues
MKVGVLYSGGKDSSLAAVLLSRDYDVELLTFVFDETHAVPSIEAAAKETGFPWKKLVFAPGFLDEVVDNIVRDGHPANAI
NEIHRRSLCAAAQEYEVVADGTRRDDRVPMRTQSEVQSLEMKYGVSYIRPLLGIGKTEIIRLAEKFFEIAYGETGTIPNG
DFENEIRSEMTRRGIDFVSLFPKNHEQSLIIKKKMVNEP
>Mature_199_residues
MKVGVLYSGGKDSSLAAVLLSRDYDVELLTFVFDETHAVPSIEAAAKETGFPWKKLVFAPGFLDEVVDNIVRDGHPANAI
NEIHRRSLCAAAQEYEVVADGTRRDDRVPMRTQSEVQSLEMKYGVSYIRPLLGIGKTEIIRLAEKFFEIAYGETGTIPNG
DFENEIRSEMTRRGIDFVSLFPKNHEQSLIIKKKMVNEP

Specific function: Unknown

COG id: COG2117

COG function: function code J; Predicted subunit of tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001962
- InterPro:   IPR014729 [H]

Pfam domain/function: PF00733 Asn_synthase [H]

EC number: NA

Molecular weight: Translated: 22338; Mature: 22338

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVGVLYSGGKDSSLAAVLLSRDYDVELLTFVFDETHAVPSIEAAAKETGFPWKKLVFAP
CEEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHCCC
GFLDEVVDNIVRDGHPANAINEIHRRSLCAAAQEYEVVADGTRRDDRVPMRTQSEVQSLE
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHH
MKYGVSYIRPLLGIGKTEIIRLAEKFFEIAYGETGTIPNGDFENEIRSEMTRRGIDFVSL
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEE
FPKNHEQSLIIKKKMVNEP
CCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MKVGVLYSGGKDSSLAAVLLSRDYDVELLTFVFDETHAVPSIEAAAKETGFPWKKLVFAP
CEEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHCCC
GFLDEVVDNIVRDGHPANAINEIHRRSLCAAAQEYEVVADGTRRDDRVPMRTQSEVQSLE
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHH
MKYGVSYIRPLLGIGKTEIIRLAEKFFEIAYGETGTIPNGDFENEIRSEMTRRGIDFVSL
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEE
FPKNHEQSLIIKKKMVNEP
CCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]