| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124486283
Identifier: 124486283
GI number: 124486283
Start: 1504859
End: 1506151
Strand: Reverse
Name: 124486283
Synonym: Mlab_1467
Alternate gene names: NA
Gene position: 1506151-1504859 (Counterclockwise)
Preceding gene: 124486284
Following gene: 124486282
Centisome position: 83.45
GC content: 47.18
Gene sequence:
>1293_bases ATGCCCAATAACTCAGGAGTATCCAGTGTTATTGGAGTCGTTATTCTCTTGCTTCTGGTCGTTCTCGCAGCTTCTGTAAT CGGTCTGACCCTCTCGAAAGCCACCCAGAACGCTGTTGACAGTACGCCGAATGTGCAGTTTATACTGTCAGCTGATTCTC AGATGCTGTATCACGGCGGCGGGGATGTTCTGTATAAGGATCGATTAACGTTTTATGATAACGGTGATGATATCACCAAT GCGATCCAAATAGATTCTGATGATACGTGGACTGAGTGGCGAACAGGTCAGGCGATTACACTACCTTGGGATTGTGTTGT TACAAATCTAACCATCTTGTCCTTAGATACTCTTGGTCGAGAACAGTTGTTGTATCGGGGTTCAGGTCTCGTGGTCCCTA CTCCCACTGAATCTCCTACTGAAACTCCCACTCCCACACTAACGCCGACCCCCACTCCTACTCTGACCCCAACCCCAACC CCCACACCCACTCCGACACCGTCCGGTTTGCCCGATGCAACATTTACGTGGGAGGTAGACTTTGGTTCTGAGGTCCCGCA TTCAAGTCTTCCGTCCTGGCTCACTGCTGATGCGTATGTCATTACTGATGAGGGATGGATATGGTGGCCTTGGTGGTGGG ATCGGTATACTGATGTTGAGTTTACTGCAGTCGAGAATGGCGCCGATGTTACCTATTTCTGGTCATCAATCGGAGTTGAT GTTTCAGATCCTTATGACAGGGTTACAGAAATGCGGTTTGACGATACAGGATTGTATCCCGTCACGCTGACCGTGACAAA TAGTTCCGGCACGAATAGTTCTACGAAGACGTTCAGCGTAAGAAATCCGGGAGTTACCGCGATGACGTGGGTTAAAAGCG ATAGAACCTCTCGTACCGGTGTGTTTGGAAGCAATGCGAGCTTGGGCTCGTATCAATGGAGGTTATTGATTCCCTCGAGC ATACAAGGATATAGTATGCAGATATATACGGATGATTGGTGGGGTTCTGAGACCGTCTATTCATATGTTCGCATTCCAAA GAAAAATACCTGGTATCACGTTGCCGGAACATACGAAGAGAATGATGCGTCGGATAATCTCATAATTTATTTTAATGGAG AGAAAGAAATGGGCGAGGGTGCTTCCGGTACATTATTGGATGTCAATGGAGTAACTACATGGAGTGAAACCAACCGCTTT TACTGTGATGCCTCGTATGAAATCCCGTTTGCACTTACATCAGCGGAGATCGCTACAGTTTATGATGATGAAAAATCTGC TTATGGGTGGTAG
Upstream 100 bases:
>100_bases CTAACAGAAGCCAGTATGGAAATAACTCCGCTGTCAGATGAGCAGATATATTGTACTATCATCACGCCAATGTGTGGTGT TGATGACAGGTGGTGCTGAT
Downstream 100 bases:
>100_bases TTTCTGCTATCTGTATTACGGGGTAATGTAACATATTTTCCAAGATACTTGGGCGTTTGTTTTTTAAGGGGAAATAGTGT GGACTATATTTGACTTTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 430; Mature: 429
Protein sequence:
>430_residues MPNNSGVSSVIGVVILLLLVVLAASVIGLTLSKATQNAVDSTPNVQFILSADSQMLYHGGGDVLYKDRLTFYDNGDDITN AIQIDSDDTWTEWRTGQAITLPWDCVVTNLTILSLDTLGREQLLYRGSGLVVPTPTESPTETPTPTLTPTPTPTLTPTPT PTPTPTPSGLPDATFTWEVDFGSEVPHSSLPSWLTADAYVITDEGWIWWPWWWDRYTDVEFTAVENGADVTYFWSSIGVD VSDPYDRVTEMRFDDTGLYPVTLTVTNSSGTNSSTKTFSVRNPGVTAMTWVKSDRTSRTGVFGSNASLGSYQWRLLIPSS IQGYSMQIYTDDWWGSETVYSYVRIPKKNTWYHVAGTYEENDASDNLIIYFNGEKEMGEGASGTLLDVNGVTTWSETNRF YCDASYEIPFALTSAEIATVYDDEKSAYGW
Sequences:
>Translated_430_residues MPNNSGVSSVIGVVILLLLVVLAASVIGLTLSKATQNAVDSTPNVQFILSADSQMLYHGGGDVLYKDRLTFYDNGDDITN AIQIDSDDTWTEWRTGQAITLPWDCVVTNLTILSLDTLGREQLLYRGSGLVVPTPTESPTETPTPTLTPTPTPTLTPTPT PTPTPTPSGLPDATFTWEVDFGSEVPHSSLPSWLTADAYVITDEGWIWWPWWWDRYTDVEFTAVENGADVTYFWSSIGVD VSDPYDRVTEMRFDDTGLYPVTLTVTNSSGTNSSTKTFSVRNPGVTAMTWVKSDRTSRTGVFGSNASLGSYQWRLLIPSS IQGYSMQIYTDDWWGSETVYSYVRIPKKNTWYHVAGTYEENDASDNLIIYFNGEKEMGEGASGTLLDVNGVTTWSETNRF YCDASYEIPFALTSAEIATVYDDEKSAYGW >Mature_429_residues PNNSGVSSVIGVVILLLLVVLAASVIGLTLSKATQNAVDSTPNVQFILSADSQMLYHGGGDVLYKDRLTFYDNGDDITNA IQIDSDDTWTEWRTGQAITLPWDCVVTNLTILSLDTLGREQLLYRGSGLVVPTPTESPTETPTPTLTPTPTPTLTPTPTP TPTPTPSGLPDATFTWEVDFGSEVPHSSLPSWLTADAYVITDEGWIWWPWWWDRYTDVEFTAVENGADVTYFWSSIGVDV SDPYDRVTEMRFDDTGLYPVTLTVTNSSGTNSSTKTFSVRNPGVTAMTWVKSDRTSRTGVFGSNASLGSYQWRLLIPSSI QGYSMQIYTDDWWGSETVYSYVRIPKKNTWYHVAGTYEENDASDNLIIYFNGEKEMGEGASGTLLDVNGVTTWSETNRFY CDASYEIPFALTSAEIATVYDDEKSAYGW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47552; Mature: 47421
Theoretical pI: Translated: 3.90; Mature: 3.90
Prosite motif: PS50093 PKD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNNSGVSSVIGVVILLLLVVLAASVIGLTLSKATQNAVDSTPNVQFILSADSQMLYHGG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEECC GDVLYKDRLTFYDNGDDITNAIQIDSDDTWTEWRTGQAITLPWDCVVTNLTILSLDTLGR CCEEEECCEEEEECCCCCCEEEEECCCCCCCCCCCCCEEEEEHHHHHHEEEEEEECCCCC EQLLYRGSGLVVPTPTESPTETPTPTLTPTPTPTLTPTPTPTPTPTPSGLPDATFTWEVD HHEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEC FGSEVPHSSLPSWLTADAYVITDEGWIWWPWWWDRYTDVEFTAVENGADVTYFWSSIGVD CCCCCCCCCCCCCCCCCEEEEECCCEEECCCCCCCCCCEEEEEECCCCEEEEEEECCCCC VSDPYDRVTEMRFDDTGLYPVTLTVTNSSGTNSSTKTFSVRNPGVTAMTWVKSDRTSRTG CCCCHHHHHHEEECCCCCEEEEEEEECCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCE VFGSNASLGSYQWRLLIPSSIQGYSMQIYTDDWWGSETVYSYVRIPKKNTWYHVAGTYEE EECCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCEEEEEEEECC NDASDNLIIYFNGEKEMGEGASGTLLDVNGVTTWSETNRFYCDASYEIPFALTSAEIATV CCCCCCEEEEECCCHHCCCCCCCCEEEECCEEEECCCCEEEEEECCCCCEEEECCEEEEE YDDEKSAYGW EECCCCCCCC >Mature Secondary Structure PNNSGVSSVIGVVILLLLVVLAASVIGLTLSKATQNAVDSTPNVQFILSADSQMLYHGG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEECC GDVLYKDRLTFYDNGDDITNAIQIDSDDTWTEWRTGQAITLPWDCVVTNLTILSLDTLGR CCEEEECCEEEEECCCCCCEEEEECCCCCCCCCCCCCEEEEEHHHHHHEEEEEEECCCCC EQLLYRGSGLVVPTPTESPTETPTPTLTPTPTPTLTPTPTPTPTPTPSGLPDATFTWEVD HHEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEC FGSEVPHSSLPSWLTADAYVITDEGWIWWPWWWDRYTDVEFTAVENGADVTYFWSSIGVD CCCCCCCCCCCCCCCCCEEEEECCCEEECCCCCCCCCCEEEEEECCCCEEEEEEECCCCC VSDPYDRVTEMRFDDTGLYPVTLTVTNSSGTNSSTKTFSVRNPGVTAMTWVKSDRTSRTG CCCCHHHHHHEEECCCCCEEEEEEEECCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCE VFGSNASLGSYQWRLLIPSSIQGYSMQIYTDDWWGSETVYSYVRIPKKNTWYHVAGTYEE EECCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCEEEEEEEECC NDASDNLIIYFNGEKEMGEGASGTLLDVNGVTTWSETNRFYCDASYEIPFALTSAEIATV CCCCCCEEEEECCCHHCCCCCCCCEEEECCEEEECCCCEEEEEECCCCCEEEECCEEEEE YDDEKSAYGW EECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA