Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

Click here to switch to the map view.

The map label for this gene is 124486255

Identifier: 124486255

GI number: 124486255

Start: 1471316

End: 1472938

Strand: Reverse

Name: 124486255

Synonym: Mlab_1439

Alternate gene names: NA

Gene position: 1472938-1471316 (Counterclockwise)

Preceding gene: 124486256

Following gene: 124486254

Centisome position: 81.6

GC content: 50.28

Gene sequence:

>1623_bases
ATGCTTCCGTTTATACAGAATATAAAAAATCGTATCCGTGTCGAGCACGTGATCTTTGCCATTCTGATTCTGGCGATCAT
TCTCAGATTCGCTTTTCTGGATCTCAAGCTCTTTCATCACGATGAAGCGATTCATGCCTGGTTTTCCTATCAGCTTCTGA
CCACCGGCAATTACCTGTATGATCCGGTATATCACGGACCCTTCCTATACTACATCACGGCATCCATGTTCGCTCTATTC
GGCGACTCCGATCTAGTCGGCAGAATCCTTCCCTGTATTGCCGGCTGCGCTCTCATACCTCTCGTCTACTGGCTGTACAG
ACTGCGGTATCTCACCGGCAAAGTCGCCGTCATCGCGGCACTTTTCCTTGCGATCGCTCCGGAACTGGTCTACTTCTCCC
GGTTTTTACGAAACGATATCTTCGTGGCCTTCTTCTCACTCCTTCTGGTCGTTGCCTTCCTTGCATGGCTGGATAAAGGC
AAATGGTATTATCTGGCCCTCGCGGCCGTGGCGGCGGCTCTCGGCATGTGTTCCAAGGAAAATATGCCGCTGATCCTTGT
TACCTTCGGCGTATTCTTCCTCTATCTTCTTTGGACCAGAAAGATCACTCTTCCGGAAAAATGGATCCGTGATCTCATTA
TCGCGGTCATTATCTTCGCTGGAATCATCTGCACGCTGTATTCCTCATTCTGGGCCCATCCCGAAATGATCCTGCAGGCA
GGTCCTATGGCCATCGAACACTGGATTGCGATGCACAACGAACAGCGGATCGCCGGGCCGCCGGTGTTCTATCTCCTGAT
GTTCATCTTGTATGAACTGCCGATCCTTATTCTGGCAGCAGCAGGCATCGTCATTTTCCTAGTGACCGGCAAAAAACGGT
CATCTGAAAAAGAAGATGAGTTGGAAAATCCGGAGGAACAAGAACAAACTGAACCAAAAAAGAAGTTCTCCTTTGCGGCC
TTGTTTCGCCGGCCGGAAGCTCCCGTCTTTGTTGACAGAAAAAAGGAGTTTATCCGGTTTGCCGTTTACTGGACATTGAT
CGCCTGCCTTACCTATGCCTACATCGGGGAAAAAGTTCCCTGGCTTTCTCTCCATCAGCTGGTGCCGATGATCTTCGTCG
CAGCGTTCGCTCTCACCTTTACCGGAAAATACTGGAAGATCCTTCTTGTTGTATGTGCCGTCCTTTTGTTTGCCACAACC
TGTTATGTGGCATACACGCCGACGGATATCGCCGAGCCGATCATTCAGGTCCAGAACTCGGAGGATCTTGTTCCCCTGAT
GGCAGCGATCGATGCCTCTGACAGAGTTGCTCTTGCGACCGATCAGGCCTGGCCCTTTATGTGGTATTACCGCGGTGATG
CCTGGGACAGATTTACCTATTATGGAGGACTGAAGGATTCGTCCACGCTTCTTTCGGGAGACTATGATATCATCATCACC
CATGATGACGAGAGTTACGACTCGCTTGACGGGTACACAAAAGAAACGATCCGGCTGAACTACTGGATCGACTGTCCAGG
TACCGGGGAGGATCCTGGCTGGATCGCATACTTCTTCACCCGTGCTGGTAAAATCGGCAGTTACAACTTCGATGTGTTTA
CCCGCACGACTCAGATCACATAA

Upstream 100 bases:

>100_bases
GGCACACTCCTGTGATAAAATGTAAGCCAAGTTTATTAACAAATGATCGTTCGGACACAGATATTCATATCCTATCCTGA
CAAACATACTTTACGCATCC

Downstream 100 bases:

>100_bases
CTACTAAGAGTCTGCCCGCCAATATAGGTACATCTATAGGGATGTGTACATGGAACAGGGAATCGTGGAACTGGAAGAAC
TACGCAGCAGATTACTGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NHL Repeat-Containing Protein; Glycosyl Transferase Family; Dolichyl-Phosphate-Mannose-Proteinmannosyltransfe Rase; Membrane-Bound Mannosyltransferase-Like Protein

Number of amino acids: Translated: 540; Mature: 540

Protein sequence:

>540_residues
MLPFIQNIKNRIRVEHVIFAILILAIILRFAFLDLKLFHHDEAIHAWFSYQLLTTGNYLYDPVYHGPFLYYITASMFALF
GDSDLVGRILPCIAGCALIPLVYWLYRLRYLTGKVAVIAALFLAIAPELVYFSRFLRNDIFVAFFSLLLVVAFLAWLDKG
KWYYLALAAVAAALGMCSKENMPLILVTFGVFFLYLLWTRKITLPEKWIRDLIIAVIIFAGIICTLYSSFWAHPEMILQA
GPMAIEHWIAMHNEQRIAGPPVFYLLMFILYELPILILAAAGIVIFLVTGKKRSSEKEDELENPEEQEQTEPKKKFSFAA
LFRRPEAPVFVDRKKEFIRFAVYWTLIACLTYAYIGEKVPWLSLHQLVPMIFVAAFALTFTGKYWKILLVVCAVLLFATT
CYVAYTPTDIAEPIIQVQNSEDLVPLMAAIDASDRVALATDQAWPFMWYYRGDAWDRFTYYGGLKDSSTLLSGDYDIIIT
HDDESYDSLDGYTKETIRLNYWIDCPGTGEDPGWIAYFFTRAGKIGSYNFDVFTRTTQIT

Sequences:

>Translated_540_residues
MLPFIQNIKNRIRVEHVIFAILILAIILRFAFLDLKLFHHDEAIHAWFSYQLLTTGNYLYDPVYHGPFLYYITASMFALF
GDSDLVGRILPCIAGCALIPLVYWLYRLRYLTGKVAVIAALFLAIAPELVYFSRFLRNDIFVAFFSLLLVVAFLAWLDKG
KWYYLALAAVAAALGMCSKENMPLILVTFGVFFLYLLWTRKITLPEKWIRDLIIAVIIFAGIICTLYSSFWAHPEMILQA
GPMAIEHWIAMHNEQRIAGPPVFYLLMFILYELPILILAAAGIVIFLVTGKKRSSEKEDELENPEEQEQTEPKKKFSFAA
LFRRPEAPVFVDRKKEFIRFAVYWTLIACLTYAYIGEKVPWLSLHQLVPMIFVAAFALTFTGKYWKILLVVCAVLLFATT
CYVAYTPTDIAEPIIQVQNSEDLVPLMAAIDASDRVALATDQAWPFMWYYRGDAWDRFTYYGGLKDSSTLLSGDYDIIIT
HDDESYDSLDGYTKETIRLNYWIDCPGTGEDPGWIAYFFTRAGKIGSYNFDVFTRTTQIT
>Mature_540_residues
MLPFIQNIKNRIRVEHVIFAILILAIILRFAFLDLKLFHHDEAIHAWFSYQLLTTGNYLYDPVYHGPFLYYITASMFALF
GDSDLVGRILPCIAGCALIPLVYWLYRLRYLTGKVAVIAALFLAIAPELVYFSRFLRNDIFVAFFSLLLVVAFLAWLDKG
KWYYLALAAVAAALGMCSKENMPLILVTFGVFFLYLLWTRKITLPEKWIRDLIIAVIIFAGIICTLYSSFWAHPEMILQA
GPMAIEHWIAMHNEQRIAGPPVFYLLMFILYELPILILAAAGIVIFLVTGKKRSSEKEDELENPEEQEQTEPKKKFSFAA
LFRRPEAPVFVDRKKEFIRFAVYWTLIACLTYAYIGEKVPWLSLHQLVPMIFVAAFALTFTGKYWKILLVVCAVLLFATT
CYVAYTPTDIAEPIIQVQNSEDLVPLMAAIDASDRVALATDQAWPFMWYYRGDAWDRFTYYGGLKDSSTLLSGDYDIIIT
HDDESYDSLDGYTKETIRLNYWIDCPGTGEDPGWIAYFFTRAGKIGSYNFDVFTRTTQIT

Specific function: Unknown

COG id: COG4745

COG function: function code O; Predicted membrane-bound mannosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62008; Mature: 62008

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPFIQNIKNRIRVEHVIFAILILAIILRFAFLDLKLFHHDEAIHAWFSYQLLTTGNYLY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHEEEEECCCEEE
DPVYHGPFLYYITASMFALFGDSDLVGRILPCIAGCALIPLVYWLYRLRYLTGKVAVIAA
CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFLAIAPELVYFSRFLRNDIFVAFFSLLLVVAFLAWLDKGKWYYLALAAVAAALGMCSKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC
NMPLILVTFGVFFLYLLWTRKITLPEKWIRDLIIAVIIFAGIICTLYSSFWAHPEMILQA
CCCEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHC
GPMAIEHWIAMHNEQRIAGPPVFYLLMFILYELPILILAAAGIVIFLVTGKKRSSEKEDE
CCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCHHH
LENPEEQEQTEPKKKFSFAALFRRPEAPVFVDRKKEFIRFAVYWTLIACLTYAYIGEKVP
CCCCCHHHHCCHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCC
WLSLHQLVPMIFVAAFALTFTGKYWKILLVVCAVLLFATTCYVAYTPTDIAEPIIQVQNS
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHCCCC
EDLVPLMAAIDASDRVALATDQAWPFMWYYRGDAWDRFTYYGGLKDSSTLLSGDYDIIIT
CCHHHHHHHCCCCCCEEEEECCCCCEEEEEECCCCCCCEEECCCCCCCCEECCCEEEEEE
HDDESYDSLDGYTKETIRLNYWIDCPGTGEDPGWIAYFFTRAGKIGSYNFDVFTRTTQIT
CCCCCCHHCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEHHCCCCCCCCEEEEEEEEECC
>Mature Secondary Structure
MLPFIQNIKNRIRVEHVIFAILILAIILRFAFLDLKLFHHDEAIHAWFSYQLLTTGNYLY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHEEEEECCCEEE
DPVYHGPFLYYITASMFALFGDSDLVGRILPCIAGCALIPLVYWLYRLRYLTGKVAVIAA
CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFLAIAPELVYFSRFLRNDIFVAFFSLLLVVAFLAWLDKGKWYYLALAAVAAALGMCSKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC
NMPLILVTFGVFFLYLLWTRKITLPEKWIRDLIIAVIIFAGIICTLYSSFWAHPEMILQA
CCCEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHC
GPMAIEHWIAMHNEQRIAGPPVFYLLMFILYELPILILAAAGIVIFLVTGKKRSSEKEDE
CCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCHHH
LENPEEQEQTEPKKKFSFAALFRRPEAPVFVDRKKEFIRFAVYWTLIACLTYAYIGEKVP
CCCCCHHHHCCHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCC
WLSLHQLVPMIFVAAFALTFTGKYWKILLVVCAVLLFATTCYVAYTPTDIAEPIIQVQNS
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHCCCC
EDLVPLMAAIDASDRVALATDQAWPFMWYYRGDAWDRFTYYGGLKDSSTLLSGDYDIIIT
CCHHHHHHHCCCCCCEEEEECCCCCEEEEEECCCCCCCEEECCCCCCCCEECCCEEEEEE
HDDESYDSLDGYTKETIRLNYWIDCPGTGEDPGWIAYFFTRAGKIGSYNFDVFTRTTQIT
CCCCCCHHCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEHHCCCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA