Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

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The map label for this gene is 124486238

Identifier: 124486238

GI number: 124486238

Start: 1450688

End: 1451458

Strand: Reverse

Name: 124486238

Synonym: Mlab_1421

Alternate gene names: NA

Gene position: 1451458-1450688 (Counterclockwise)

Preceding gene: 124486239

Following gene: 124486237

Centisome position: 80.41

GC content: 43.32

Gene sequence:

>771_bases
ATGAAAGGTATAACCCATATCATTCTCACCATGGCAACAATGCTTGTTGTTCTTGCCCCCCTAACTCCATCTCTCTTCAC
CTTGGAATCCATCCCAGCAGTGCTGATTCTCATATTAGGCGCTTTCTTTGGTTCTCTCGCCCCGGATATCGATAAAGGAA
AGGAAGCCGCAATATATCATTCTGAGATTCCAGGTGCCCGCGGCAGAAAATTCCATCTCACGCCGGTTTTTGGCTATGCC
CTCTATTATACCTGCTACAAACCGCTTCAATTTCTTTTCCGGATAATTCTCGGTAAAAAAATATATGCTATTAATGGACA
TCGTGAACTCCCTCACTCACCGATTGGTATTTTATTAATCTCAATTCTCGTTACAGTTTACCTTTGGCTCATATGCTTAG
CACTTTCATTTGTTCCATATCTCTCTCCTTTATACAACAACTCCCTCATATTTGTGTTCGGCTCGGGTTTTCTTCTGGGT
TGTTTCCTGCATTTACTTGAAGATACCTGCGATAATTCCGGGATCCATTATTTCTATCCCTTCTGTTTTAGTCGCCTGCG
TGGAAAAGTCAAGGGAGACGGTACCGATCCGCGTCCAAAAATATTTGCCGTTGTCCTGCTAATAGCCGCTTTCATTCTTG
GGGTTCTGTTCATATCTGGATTAATACCCGCAATATGGTCTTATCCGACAACGCTCATGGTTCCAATTGTTCTATGGGTC
ATCTTCCTGAAAGCATCAGGTGTACCGGCAAGAAAAGAGGTTCGGGAATAA

Upstream 100 bases:

>100_bases
GATGAAATTGCCGGCATGGTTACAACTTTCGGCCTCCCCTGGCCAAAATGGCTGTAACCTCTCGTATTATCTCTCTATAA
GATAAATAATTCACCAATAA

Downstream 100 bases:

>100_bases
GCTTCTAATCCTGAAGAGTCAAATACATAACCATGTATAAACTCGTCTGTGTACACTGCGGCGCTGAGTATCCGCCTGAC
GCCATTGTGTATAATTGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MKGITHIILTMATMLVVLAPLTPSLFTLESIPAVLILILGAFFGSLAPDIDKGKEAAIYHSEIPGARGRKFHLTPVFGYA
LYYTCYKPLQFLFRIILGKKIYAINGHRELPHSPIGILLISILVTVYLWLICLALSFVPYLSPLYNNSLIFVFGSGFLLG
CFLHLLEDTCDNSGIHYFYPFCFSRLRGKVKGDGTDPRPKIFAVVLLIAAFILGVLFISGLIPAIWSYPTTLMVPIVLWV
IFLKASGVPARKEVRE

Sequences:

>Translated_256_residues
MKGITHIILTMATMLVVLAPLTPSLFTLESIPAVLILILGAFFGSLAPDIDKGKEAAIYHSEIPGARGRKFHLTPVFGYA
LYYTCYKPLQFLFRIILGKKIYAINGHRELPHSPIGILLISILVTVYLWLICLALSFVPYLSPLYNNSLIFVFGSGFLLG
CFLHLLEDTCDNSGIHYFYPFCFSRLRGKVKGDGTDPRPKIFAVVLLIAAFILGVLFISGLIPAIWSYPTTLMVPIVLWV
IFLKASGVPARKEVRE
>Mature_256_residues
MKGITHIILTMATMLVVLAPLTPSLFTLESIPAVLILILGAFFGSLAPDIDKGKEAAIYHSEIPGARGRKFHLTPVFGYA
LYYTCYKPLQFLFRIILGKKIYAINGHRELPHSPIGILLISILVTVYLWLICLALSFVPYLSPLYNNSLIFVFGSGFLLG
CFLHLLEDTCDNSGIHYFYPFCFSRLRGKVKGDGTDPRPKIFAVVLLIAAFILGVLFISGLIPAIWSYPTTLMVPIVLWV
IFLKASGVPARKEVRE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28452; Mature: 28452

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGITHIILTMATMLVVLAPLTPSLFTLESIPAVLILILGAFFGSLAPDIDKGKEAAIYH
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEC
SEIPGARGRKFHLTPVFGYALYYTCYKPLQFLFRIILGKKIYAINGHRELPHSPIGILLI
CCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHH
SILVTVYLWLICLALSFVPYLSPLYNNSLIFVFGSGFLLGCFLHLLEDTCDNSGIHYFYP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHCCCCCCEEHHH
FCFSRLRGKVKGDGTDPRPKIFAVVLLIAAFILGVLFISGLIPAIWSYPTTLMVPIVLWV
HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
IFLKASGVPARKEVRE
HHHHCCCCCHHHHHCC
>Mature Secondary Structure
MKGITHIILTMATMLVVLAPLTPSLFTLESIPAVLILILGAFFGSLAPDIDKGKEAAIYH
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEC
SEIPGARGRKFHLTPVFGYALYYTCYKPLQFLFRIILGKKIYAINGHRELPHSPIGILLI
CCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHH
SILVTVYLWLICLALSFVPYLSPLYNNSLIFVFGSGFLLGCFLHLLEDTCDNSGIHYFYP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHCCCCCCEEHHH
FCFSRLRGKVKGDGTDPRPKIFAVVLLIAAFILGVLFISGLIPAIWSYPTTLMVPIVLWV
HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
IFLKASGVPARKEVRE
HHHHCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA