| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124486238
Identifier: 124486238
GI number: 124486238
Start: 1450688
End: 1451458
Strand: Reverse
Name: 124486238
Synonym: Mlab_1421
Alternate gene names: NA
Gene position: 1451458-1450688 (Counterclockwise)
Preceding gene: 124486239
Following gene: 124486237
Centisome position: 80.41
GC content: 43.32
Gene sequence:
>771_bases ATGAAAGGTATAACCCATATCATTCTCACCATGGCAACAATGCTTGTTGTTCTTGCCCCCCTAACTCCATCTCTCTTCAC CTTGGAATCCATCCCAGCAGTGCTGATTCTCATATTAGGCGCTTTCTTTGGTTCTCTCGCCCCGGATATCGATAAAGGAA AGGAAGCCGCAATATATCATTCTGAGATTCCAGGTGCCCGCGGCAGAAAATTCCATCTCACGCCGGTTTTTGGCTATGCC CTCTATTATACCTGCTACAAACCGCTTCAATTTCTTTTCCGGATAATTCTCGGTAAAAAAATATATGCTATTAATGGACA TCGTGAACTCCCTCACTCACCGATTGGTATTTTATTAATCTCAATTCTCGTTACAGTTTACCTTTGGCTCATATGCTTAG CACTTTCATTTGTTCCATATCTCTCTCCTTTATACAACAACTCCCTCATATTTGTGTTCGGCTCGGGTTTTCTTCTGGGT TGTTTCCTGCATTTACTTGAAGATACCTGCGATAATTCCGGGATCCATTATTTCTATCCCTTCTGTTTTAGTCGCCTGCG TGGAAAAGTCAAGGGAGACGGTACCGATCCGCGTCCAAAAATATTTGCCGTTGTCCTGCTAATAGCCGCTTTCATTCTTG GGGTTCTGTTCATATCTGGATTAATACCCGCAATATGGTCTTATCCGACAACGCTCATGGTTCCAATTGTTCTATGGGTC ATCTTCCTGAAAGCATCAGGTGTACCGGCAAGAAAAGAGGTTCGGGAATAA
Upstream 100 bases:
>100_bases GATGAAATTGCCGGCATGGTTACAACTTTCGGCCTCCCCTGGCCAAAATGGCTGTAACCTCTCGTATTATCTCTCTATAA GATAAATAATTCACCAATAA
Downstream 100 bases:
>100_bases GCTTCTAATCCTGAAGAGTCAAATACATAACCATGTATAAACTCGTCTGTGTACACTGCGGCGCTGAGTATCCGCCTGAC GCCATTGTGTATAATTGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MKGITHIILTMATMLVVLAPLTPSLFTLESIPAVLILILGAFFGSLAPDIDKGKEAAIYHSEIPGARGRKFHLTPVFGYA LYYTCYKPLQFLFRIILGKKIYAINGHRELPHSPIGILLISILVTVYLWLICLALSFVPYLSPLYNNSLIFVFGSGFLLG CFLHLLEDTCDNSGIHYFYPFCFSRLRGKVKGDGTDPRPKIFAVVLLIAAFILGVLFISGLIPAIWSYPTTLMVPIVLWV IFLKASGVPARKEVRE
Sequences:
>Translated_256_residues MKGITHIILTMATMLVVLAPLTPSLFTLESIPAVLILILGAFFGSLAPDIDKGKEAAIYHSEIPGARGRKFHLTPVFGYA LYYTCYKPLQFLFRIILGKKIYAINGHRELPHSPIGILLISILVTVYLWLICLALSFVPYLSPLYNNSLIFVFGSGFLLG CFLHLLEDTCDNSGIHYFYPFCFSRLRGKVKGDGTDPRPKIFAVVLLIAAFILGVLFISGLIPAIWSYPTTLMVPIVLWV IFLKASGVPARKEVRE >Mature_256_residues MKGITHIILTMATMLVVLAPLTPSLFTLESIPAVLILILGAFFGSLAPDIDKGKEAAIYHSEIPGARGRKFHLTPVFGYA LYYTCYKPLQFLFRIILGKKIYAINGHRELPHSPIGILLISILVTVYLWLICLALSFVPYLSPLYNNSLIFVFGSGFLLG CFLHLLEDTCDNSGIHYFYPFCFSRLRGKVKGDGTDPRPKIFAVVLLIAAFILGVLFISGLIPAIWSYPTTLMVPIVLWV IFLKASGVPARKEVRE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28452; Mature: 28452
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGITHIILTMATMLVVLAPLTPSLFTLESIPAVLILILGAFFGSLAPDIDKGKEAAIYH CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEC SEIPGARGRKFHLTPVFGYALYYTCYKPLQFLFRIILGKKIYAINGHRELPHSPIGILLI CCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHH SILVTVYLWLICLALSFVPYLSPLYNNSLIFVFGSGFLLGCFLHLLEDTCDNSGIHYFYP HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHCCCCCCEEHHH FCFSRLRGKVKGDGTDPRPKIFAVVLLIAAFILGVLFISGLIPAIWSYPTTLMVPIVLWV HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH IFLKASGVPARKEVRE HHHHCCCCCHHHHHCC >Mature Secondary Structure MKGITHIILTMATMLVVLAPLTPSLFTLESIPAVLILILGAFFGSLAPDIDKGKEAAIYH CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEC SEIPGARGRKFHLTPVFGYALYYTCYKPLQFLFRIILGKKIYAINGHRELPHSPIGILLI CCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHH SILVTVYLWLICLALSFVPYLSPLYNNSLIFVFGSGFLLGCFLHLLEDTCDNSGIHYFYP HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHCCCCCCEEHHH FCFSRLRGKVKGDGTDPRPKIFAVVLLIAAFILGVLFISGLIPAIWSYPTTLMVPIVLWV HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH IFLKASGVPARKEVRE HHHHCCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA