| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124486236
Identifier: 124486236
GI number: 124486236
Start: 1448869
End: 1449447
Strand: Reverse
Name: 124486236
Synonym: Mlab_1419
Alternate gene names: NA
Gene position: 1449447-1448869 (Counterclockwise)
Preceding gene: 124486237
Following gene: 124486230
Centisome position: 80.3
GC content: 47.67
Gene sequence:
>579_bases GTGGTCCTGCTTGCTTTGTTTGCAGTCCCTGCGGCTGCAAACTCTGCAGTGTATTTTGTATCGGATGACGGGACCGTTCT GACGGCGAATGCTACTCTGATTAATCAGAGTACATTTCTCCTGGTGAAACCCGGTTTCTTAGGTGAGGAGGTTGCCCTTT CGGTCGACAATCTGACGATCCAAAACGAGAGCGGCGTTGTCGAGTATACCCAAAATGGAAAAACCGTTTCGTTTCCTGCG GGGAATTACACGCTGAACTACTCTGCGAAAATCGAGAACGGATTGGTTTATCTGAAATATCCCGAGCCGTACAATGTCTC GGTTTATCTCCCTGAACGGTTTCAGACAGGGCATCTGATCTTAGGTACGGTTGGGACCGGGGGTGTTGTATCTTCTTCGG ACAATTCATCCTATGGTTCGATGGTCACCTTTGAGAATACAACGACTGCCTCGTTCACGTTTTACGATGACGTGCGTGAA CCGCTTCTCTACATTTTCTTAGGGATCTGGGGCGTTGTGTTTATTATAGCGGGCATAAGGTATCTCAGACTGAAACGAAA ACCGATGAAGGATTTCTAA
Upstream 100 bases:
>100_bases ACCTGCTGAAAGACCCTGAAACTGTAATTAAACAATGCGCCCCGCCAATCGAGATCGACCCAACCATCGAAGCACTGCTT GCTGTATTGTAAGCATCCTT
Downstream 100 bases:
>100_bases ACGGCGATATTTCTCCGATATCATTTTTTTATTTTTGCTTTTTTTCTTGTCCTGATTTGATTTGGGTGTTGATCAGTACA AGTGGTTCGCCTATGTAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MVLLALFAVPAAANSAVYFVSDDGTVLTANATLINQSTFLLVKPGFLGEEVALSVDNLTIQNESGVVEYTQNGKTVSFPA GNYTLNYSAKIENGLVYLKYPEPYNVSVYLPERFQTGHLILGTVGTGGVVSSSDNSSYGSMVTFENTTTASFTFYDDVRE PLLYIFLGIWGVVFIIAGIRYLRLKRKPMKDF
Sequences:
>Translated_192_residues MVLLALFAVPAAANSAVYFVSDDGTVLTANATLINQSTFLLVKPGFLGEEVALSVDNLTIQNESGVVEYTQNGKTVSFPA GNYTLNYSAKIENGLVYLKYPEPYNVSVYLPERFQTGHLILGTVGTGGVVSSSDNSSYGSMVTFENTTTASFTFYDDVRE PLLYIFLGIWGVVFIIAGIRYLRLKRKPMKDF >Mature_192_residues MVLLALFAVPAAANSAVYFVSDDGTVLTANATLINQSTFLLVKPGFLGEEVALSVDNLTIQNESGVVEYTQNGKTVSFPA GNYTLNYSAKIENGLVYLKYPEPYNVSVYLPERFQTGHLILGTVGTGGVVSSSDNSSYGSMVTFENTTTASFTFYDDVRE PLLYIFLGIWGVVFIIAGIRYLRLKRKPMKDF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21001; Mature: 21001
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLLALFAVPAAANSAVYFVSDDGTVLTANATLINQSTFLLVKPGFLGEEVALSVDNLTI CEEEEEEECCCCCCCEEEEECCCCEEEEEEEEEEECCEEEEECCCCCCCEEEEEEEEEEE QNESGVVEYTQNGKTVSFPAGNYTLNYSAKIENGLVYLKYPEPYNVSVYLPERFQTGHLI ECCCCEEEEECCCCEEEECCCCEEEEEEEEECCCEEEEECCCCCEEEEEECCCCCCCCEE LGTVGTGGVVSSSDNSSYGSMVTFENTTTASFTFYDDVREPLLYIFLGIWGVVFIIAGIR EEECCCCCEEECCCCCCCCCEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH YLRLKRKPMKDF EEEEECCCCCCC >Mature Secondary Structure MVLLALFAVPAAANSAVYFVSDDGTVLTANATLINQSTFLLVKPGFLGEEVALSVDNLTI CEEEEEEECCCCCCCEEEEECCCCEEEEEEEEEEECCEEEEECCCCCCCEEEEEEEEEEE QNESGVVEYTQNGKTVSFPAGNYTLNYSAKIENGLVYLKYPEPYNVSVYLPERFQTGHLI ECCCCEEEEECCCCEEEECCCCEEEEEEEEECCCEEEEECCCCCEEEEEECCCCCCCCEE LGTVGTGGVVSSSDNSSYGSMVTFENTTTASFTFYDDVREPLLYIFLGIWGVVFIIAGIR EEECCCCCEEECCCCCCCCCEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH YLRLKRKPMKDF EEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA