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The map label for this gene is dnaJ2 [H]

Identifier: 124486230

GI number: 124486230

Start: 1444058

End: 1444822

Strand: Reverse

Name: dnaJ2 [H]

Synonym: Mlab_1413

Alternate gene names: 124486230

Gene position: 1444822-1444058 (Counterclockwise)

Preceding gene: 124486236

Following gene: 124486229

Centisome position: 80.05

GC content: 49.15

Gene sequence:

>765_bases
ATGAGTAGAATGGGCGATTCCCACTATGATACGCTCGGCGTAGCAGAAAATGCAACGCCGGAAATGATAAAAAAAGCCTA
TGTTGCTCTCGTAAAAGAGTTCCATCCAGATCACGCGGGTGAAAGCGAGGATAAACAGCAGGAGTACAACGAGCGCCTGC
TCGAAATAATGGCCGCATATGAGGTTCTCGGCAATCCGGAAACCAAGGCCGCCTACGACGCCGAACGTGCCGATGTTCCC
ATTTTCTCCACTCAGCCCCGTGGCAAAAAAATGTCGGGAATGCCGACAAAAAGCGGCGATATCGAAACGGATTATCCGAT
ATCCATGACGATCGCCGCATATGGAAAAGGCAAGATCCCGATGAAGGTCGCGGGTGAAAAGGTCGTCATCAAAGTCTATC
CCGGGGTCAGACGATACAGAATTGCTAACAAAGGGGTGCCTGTCGAAGGAAAACCCCGGGGGGATCTGTATGTGAATCTC
AAAGTTATTCCTGAAGATAACTGGGAGATCGATGATGCAACAAACGATCTGATCTGCCGTCTGCAGATCCCTCCGAAAAT
CGCAGAACAGGGCGGCGTGATCCCTCTTACCCTGCTGTTTAATAAAACCATTAAGATCACTGTTCCTGCGGGTGTAAAAA
CCGGAGACCGTTTTGCACCGCCGGAAGGAAAAGGACTTGGCGTTTTGTCTCCGAAGAAGAAAGGCAATATCATCATCGAG
GTTGAAGTTGCAAAGAAAAAAGGTCTCTTTGGCCTTTTTGGATGA

Upstream 100 bases:

>100_bases
TGCGAACCGAAGAGACGTTGTCCCGTGGTCGACTCCGATATACATACAGGAATGTATTGCTCGAATATGAGATAAGTTCT
ATCCTTTATAACACCAATAG

Downstream 100 bases:

>100_bases
ATCATGACCGAAAAAAACGGAAACCTTACTGCGGCCGATTTTCATCACGAACTGTACCGCAGATTTGATGCGGCAACGGA
GCGCGGCTCCTCGCATATCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 253

Protein sequence:

>254_residues
MSRMGDSHYDTLGVAENATPEMIKKAYVALVKEFHPDHAGESEDKQQEYNERLLEIMAAYEVLGNPETKAAYDAERADVP
IFSTQPRGKKMSGMPTKSGDIETDYPISMTIAAYGKGKIPMKVAGEKVVIKVYPGVRRYRIANKGVPVEGKPRGDLYVNL
KVIPEDNWEIDDATNDLICRLQIPPKIAEQGGVIPLTLLFNKTIKITVPAGVKTGDRFAPPEGKGLGVLSPKKKGNIIIE
VEVAKKKGLFGLFG

Sequences:

>Translated_254_residues
MSRMGDSHYDTLGVAENATPEMIKKAYVALVKEFHPDHAGESEDKQQEYNERLLEIMAAYEVLGNPETKAAYDAERADVP
IFSTQPRGKKMSGMPTKSGDIETDYPISMTIAAYGKGKIPMKVAGEKVVIKVYPGVRRYRIANKGVPVEGKPRGDLYVNL
KVIPEDNWEIDDATNDLICRLQIPPKIAEQGGVIPLTLLFNKTIKITVPAGVKTGDRFAPPEGKGLGVLSPKKKGNIIIE
VEVAKKKGLFGLFG
>Mature_253_residues
SRMGDSHYDTLGVAENATPEMIKKAYVALVKEFHPDHAGESEDKQQEYNERLLEIMAAYEVLGNPETKAAYDAERADVPI
FSTQPRGKKMSGMPTKSGDIETDYPISMTIAAYGKGKIPMKVAGEKVVIKVYPGVRRYRIANKGVPVEGKPRGDLYVNLK
VIPEDNWEIDDATNDLICRLQIPPKIAEQGGVIPLTLLFNKTIKITVPAGVKTGDRFAPPEGKGLGVLSPKKKGNIIIEV
EVAKKKGLFGLFG

Specific function: Does not influence ATP binding or hydrolysis nor ADP release. Exerts influence on the interaction of dnaK with substrates; in the presence of dafA, dnaJ inhibits substrate binding, and substrate already bound to dnaK is displaced by dnaJ and dafA [H]

COG id: COG2214

COG function: function code O; DnaJ-class molecular chaperone

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 J domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002939
- InterPro:   IPR001623
- InterPro:   IPR018253
- InterPro:   IPR008971
- InterPro:   IPR015609
- InterPro:   IPR003095 [H]

Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C [H]

EC number: NA

Molecular weight: Translated: 27827; Mature: 27695

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRMGDSHYDTLGVAENATPEMIKKAYVALVKEFHPDHAGESEDKQQEYNERLLEIMAAY
CCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
EVLGNPETKAAYDAERADVPIFSTQPRGKKMSGMPTKSGDIETDYPISMTIAAYGKGKIP
HHHCCCCCCHHCCCHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCC
MKVAGEKVVIKVYPGVRRYRIANKGVPVEGKPRGDLYVNLKVIPEDNWEIDDATNDLICR
EEECCCEEEEEECCCCEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEE
LQIPPKIAEQGGVIPLTLLFNKTIKITVPAGVKTGDRFAPPEGKGLGVLSPKKKGNIIIE
EECCHHHHHCCCEEEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
VEVAKKKGLFGLFG
EEEECCCCCEECCC
>Mature Secondary Structure 
SRMGDSHYDTLGVAENATPEMIKKAYVALVKEFHPDHAGESEDKQQEYNERLLEIMAAY
CCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
EVLGNPETKAAYDAERADVPIFSTQPRGKKMSGMPTKSGDIETDYPISMTIAAYGKGKIP
HHHCCCCCCHHCCCHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCC
MKVAGEKVVIKVYPGVRRYRIANKGVPVEGKPRGDLYVNLKVIPEDNWEIDDATNDLICR
EEECCCEEEEEECCCCEEEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEEE
LQIPPKIAEQGGVIPLTLLFNKTIKITVPAGVKTGDRFAPPEGKGLGVLSPKKKGNIIIE
EECCHHHHHCCCEEEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
VEVAKKKGLFGLFG
EEEECCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9349721; 9276481; 10092456 [H]